RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-210ENST00000519362 CDC42EP3Q9UKI2 254 aa9.78□□□□□ -0.84
SPIDR-210ENST00000519362 TRAV9-1A0A075B6T8 112 aa9.77□□□□□ -0.84
SPIDR-210ENST00000519362 RPL15P61313 204 aaKnown RBP9.77□□□□□ -0.84
SPIDR-210ENST00000519362 NDPQ00604 133 aa9.77□□□□□ -0.84
SPIDR-210ENST00000519362 OR5I1Q13606 314 aa9.77□□□□□ -0.84
SPIDR-210ENST00000519362 TIGITQ495A1 244 aa9.77□□□□□ -0.84
SPIDR-210ENST00000519362 GFI1BQ5VTD9 330 aa9.77□□□□□ -0.84
SPIDR-210ENST00000519362 HIST3H2BBQ8N257 126 aa9.77□□□□□ -0.84
SPIDR-210ENST00000519362 ARPC1AQ92747 370 aa9.77□□□□□ -0.84
SPIDR-210ENST00000519362 RASL11BQ9BPW5 248 aa9.77□□□□□ -0.84
SPIDR-210ENST00000519362 POLR3KQ9Y2Y1 108 aaPredicted RBP9.77□□□□□ -0.84
SPIDR-210ENST00000519362 V9GYV3 84 aa9.77□□□□□ -0.84
SPIDR-210ENST00000519362 IGLV11-55A0A075B6I3 123 aa9.77□□□□□ -0.85
SPIDR-210ENST00000519362 A0A0U1RQK1 487 aa9.77□□□□□ -0.85
SPIDR-210ENST00000519362 ZNF320A2RRD8 509 aa9.77□□□□□ -0.85
SPIDR-210ENST00000519362 SLC17A3O00476 420 aa9.77□□□□□ -0.85
SPIDR-210ENST00000519362 S100A9P06702 114 aaKnown RBP9.77□□□□□ -0.85
SPIDR-210ENST00000519362 ERVFC1-1P60608 527 aa9.77□□□□□ -0.85
SPIDR-210ENST00000519362 COA6Q5JTJ3 125 aaKnown RBP9.77□□□□□ -0.85
SPIDR-210ENST00000519362 TTC9CQ8N5M4 171 aa9.77□□□□□ -0.85
SPIDR-210ENST00000519362 FANCD2OSQ96PS1 177 aa9.77□□□□□ -0.85
SPIDR-210ENST00000519362 OSTCQ9NRP0 149 aa9.77□□□□□ -0.85
SPIDR-210ENST00000519362 MRPL27Q9P0M9 148 aaKnown RBP9.77□□□□□ -0.85
SPIDR-210ENST00000519362 PITPNC1Q9UKF7 332 aa9.77□□□□□ -0.85
SPIDR-210ENST00000519362 HIGD1AQ9Y241 93 aa9.77□□□□□ -0.85
SPIDR-210ENST00000519362 NCBP2LA6PVI3 153 aaKnown RBP9.76□□□□□ -0.85
SPIDR-210ENST00000519362 PEX7O00628 323 aa9.76□□□□□ -0.85
SPIDR-210ENST00000519362 ISLRO14498 428 aa9.76□□□□□ -0.85
SPIDR-210ENST00000519362 NBEAP1P0C6P0 100 aa9.76□□□□□ -0.85
SPIDR-210ENST00000519362 TMEM11P17152 192 aa9.76□□□□□ -0.85
SPIDR-210ENST00000519362 PDLIM4P50479 330 aa9.76□□□□□ -0.85
SPIDR-210ENST00000519362 KLF17Q5JT82 389 aaPredicted RBP9.76□□□□□ -0.85
SPIDR-210ENST00000519362 LINC00479Q96M42 142 aa9.76□□□□□ -0.85
SPIDR-210ENST00000519362 ZNF48Q96MX3 618 aaPredicted RBP9.76□□□□□ -0.85
SPIDR-210ENST00000519362 RBM14Q96PK6 669 aaKnown RBP9.76□□□□□ -0.85
SPIDR-210ENST00000519362 GPR61Q9BZJ8 451 aa9.76□□□□□ -0.85
SPIDR-210ENST00000519362 GAR1Q9NY12 217 aaKnown RBP9.76□□□□□ -0.85
SPIDR-210ENST00000519362 FAM106CPP0CH98 169 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 RD3LP0DJH9 198 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 LYZP61626 148 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 RANP62826 216 aaKnown RBP9.75□□□□□ -0.85
SPIDR-210ENST00000519362 Q8N9W7 124 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 SLC25A39Q9BZJ4 359 aaPredicted RBP9.75□□□□□ -0.85
SPIDR-210ENST00000519362 LPAR2Q9HBW0 351 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 TMEM14CQ9P0S9 112 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 IGSF10Q6WRI0 2623 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 IGHV7-81A0A0B4J1V7 117 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 TOMM40O96008 361 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 FABP1P07148 127 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 SNRPCP09234 159 aaKnown RBP9.75□□□□□ -0.85
SPIDR-210ENST00000519362 EGR2P11161 476 aaPredicted RBP9.75□□□□□ -0.85
SPIDR-210ENST00000519362 SAA4P35542 130 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 CNN1P51911 297 aaKnown RBP9.75□□□□□ -0.85
SPIDR-210ENST00000519362 YPEL3P61236 119 aaPredicted RBP9.75□□□□□ -0.85
SPIDR-210ENST00000519362 LEMD1Q68G75 181 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 BLNKQ8WV28 456 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 RNASE7Q9H1E1 156 aaKnown RBP9.75□□□□□ -0.85
SPIDR-210ENST00000519362 C1RLQ9NZP8 487 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 EPDR1Q9UM22 224 aa9.75□□□□□ -0.85
SPIDR-210ENST00000519362 F8W735 103 aaPredicted RBP9.74□□□□□ -0.85
SPIDR-210ENST00000519362 TMEM183BQ1AE95 376 aa9.74□□□□□ -0.85
SPIDR-210ENST00000519362 RPEL1Q2QD12 228 aa9.74□□□□□ -0.85
SPIDR-210ENST00000519362 FAM120AOSQ5T036 256 aa9.74□□□□□ -0.85
SPIDR-210ENST00000519362 ZNF600Q6ZNG1 722 aa9.74□□□□□ -0.85
SPIDR-210ENST00000519362 TMEM183AQ8IXX5 376 aa9.74□□□□□ -0.85
SPIDR-210ENST00000519362 PIP4P2Q8N4L2 257 aa9.74□□□□□ -0.85
SPIDR-210ENST00000519362 ZNF491Q8N8L2 437 aa9.74□□□□□ -0.85
SPIDR-210ENST00000519362 CFAP46Q8IYW2 2715 aa9.74□□□□□ -0.85
SPIDR-210ENST00000519362 ASH1LQ9NR48 2969 aaKnown RBP9.74□□□□□ -0.85
SPIDR-210ENST00000519362 SVEP1Q4LDE5 3571 aa9.73□□□□□ -0.85
SPIDR-210ENST00000519362 TRAV30A0A087WSZ9 112 aa9.73□□□□□ -0.85
SPIDR-210ENST00000519362 PGPA6NDG6 321 aa9.73□□□□□ -0.85
SPIDR-210ENST00000519362 PCP4L1A6NKN8 68 aa9.73□□□□□ -0.85
SPIDR-210ENST00000519362 HLA-DRB1P01911 266 aa9.73□□□□□ -0.85
SPIDR-210ENST00000519362 S100A2P29034 98 aa9.73□□□□□ -0.85
SPIDR-210ENST00000519362 BRS3P32247 399 aa9.73□□□□□ -0.85
SPIDR-210ENST00000519362 PAX8Q06710 450 aa9.73□□□□□ -0.85
SPIDR-210ENST00000519362 IBA57Q5T440 356 aaKnown RBP9.73□□□□□ -0.85
SPIDR-210ENST00000519362 CCL19Q99731 98 aa9.73□□□□□ -0.85
SPIDR-210ENST00000519362 KLF12Q9Y4X4 402 aa9.73□□□□□ -0.85
SPIDR-210ENST00000519362 TRAPPC1Q9Y5R8 145 aa9.73□□□□□ -0.85
SPIDR-210ENST00000519362 CENPVL3A0A0U1RRI6 287 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 WI2-2373I1.2A0A1W2PRP0 233 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 XKRY2A2RUG3 117 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 NPFFO15130 113 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 RNF224P0DH78 156 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 HIST1H1BP16401 226 aaKnown RBP9.72□□□□□ -0.85
SPIDR-210ENST00000519362 GNG5P63218 68 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 PDZD11Q5EBL8 140 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 FAM231DQ6ZW35 169 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 SHANK2-AS3Q9BTD1 123 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 CSMD1Q96PZ7 3565 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 TRAV34A0A0B4J273 112 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 VWC2LB2RUY7 222 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 H3BRN7 92 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 SLC25A5P05141 298 aaKnown RBP9.72□□□□□ -0.85
SPIDR-210ENST00000519362 HIST1H1EP10412 219 aaKnown RBP9.72□□□□□ -0.85
SPIDR-210ENST00000519362 MGST1P10620 155 aaKnown RBP9.72□□□□□ -0.85
SPIDR-210ENST00000519362 MFAP4P55083 255 aa9.72□□□□□ -0.85
SPIDR-210ENST00000519362 BAGE2Q86Y30 109 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms