RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 PSMG4Q5JS54 123 aa5.91□□□□□ -1.46
CTNNA1-215ENST00000519309 FAM222AQ5U5X8 452 aa5.91□□□□□ -1.46
CTNNA1-215ENST00000519309 OR51S1Q8NGJ8 323 aa5.91□□□□□ -1.46
CTNNA1-215ENST00000519309 TMEM170AQ8WVE7 144 aa5.91□□□□□ -1.46
CTNNA1-215ENST00000519309 DIRAS2Q96HU8 199 aa5.91□□□□□ -1.46
CTNNA1-215ENST00000519309 RAB40CQ96S21 281 aa5.91□□□□□ -1.46
CTNNA1-215ENST00000519309 TMEM222Q9H0R3 208 aa5.91□□□□□ -1.46
CTNNA1-215ENST00000519309 SEPSECSQ9HD40 501 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-215ENST00000519309 COPZ2Q9P299 210 aa5.91□□□□□ -1.46
CTNNA1-215ENST00000519309 XCL2Q9UBD3 114 aa5.91□□□□□ -1.46
CTNNA1-215ENST00000519309 GPR132Q9UNW8 380 aa5.91□□□□□ -1.46
CTNNA1-215ENST00000519309 ANKRD20A5PA0PJZ0 165 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 HELTA6NFD8 242 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 CRYM-AS1A6NIL9 109 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 INS-IGF2F8WCM5 200 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 H3BMM0 161 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 GSTZ1O43708 216 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 NXPH3O95157 252 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 CDS2O95674 445 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 AKAIN1P0CW23 69 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 HLA-DRB4P13762 266 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 RPL5P46777 297 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 SUPT4H1P63272 117 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 MRPS10P82664 201 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 SSBP1Q04837 148 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 BSXQ3C1V8 233 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 AARDQ4LEZ3 155 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 Q5VSD8 79 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 SELENOHQ8IZQ5 122 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 LYPD1Q8N2G4 141 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 SLC35G3Q8N808 338 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 ZFAND1Q8TCF1 268 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 TRIM63Q969Q1 353 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 GPR146Q96CH1 333 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 C18orf15Q96N68 181 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 METTL26Q96S19 204 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 ATG101Q9BSB4 218 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 RBM38Q9H0Z9 239 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 NAA60Q9H7X0 242 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 V9GYH0 126 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 HLA-DRB4X5D2U9 266 aa5.9□□□□□ -1.46
CTNNA1-215ENST00000519309 FAT1Q14517 4588 aa5.9□□□□□ -1.47
CTNNA1-215ENST00000519309 TEX13DA0A0J9YY54 714 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 FAM90A26D6RGX4 464 aa5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 NPPCP23582 126 aa5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 HOXA1P49639 335 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 EIF2B2P49770 351 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 EMP1P54849 157 aa5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 ERHP84090 104 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 TTC32Q5I0X7 151 aa5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 TMEM268Q5VZI3 342 aa5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 CCDC71LQ8N9Z2 235 aa5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 C15orf40Q8WUR7 153 aa5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 GLMPQ8WWB7 406 aa5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 RBPMSQ93062 196 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 CLUHP3Q96NS8 147 aa5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 BCL7BQ9BQE9 202 aa5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 CACNG5Q9UF02 275 aa5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 U3KQE9 123 aa5.89□□□□□ -1.47
CTNNA1-215ENST00000519309 DISC1C4P0D8 188 aa5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 TMEM50AO95807 157 aa5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 IGKV1-17P01599 117 aa5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 HTN3P15516 51 aa5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 SNRPD3P62318 126 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 DHRS2Q13268 280 aa5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 KLF9Q13886 244 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 SURF2Q15527 256 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 ZNF79Q15937 498 aa5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 ZNF709Q8N972 641 aa5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 MCFD2Q8NI22 146 aa5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 RRNAD1Q96FB5 475 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 NARS2Q96I59 477 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 KRTAP1-5Q9BYS1 174 aa5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 C14orf166Q9Y224 244 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 YTHDF2Q9Y5A9 579 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-215ENST00000519309 FABP12A6NFH5 140 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 VAMP1P23763 118 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 SNCAP37840 140 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 NKX2-1P43699 371 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 XGP55808 180 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 SPCS3P61009 180 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 DAD1P61803 113 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 NMSQ5H8A3 153 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 C16orf54Q6UWD8 224 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 LYZL2Q7Z4W2 148 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 LINC00528Q8N1L1 170 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 RNASE11Q8TAA1 199 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 FRZBQ92765 325 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 PRRT1Q99946 306 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 Q9H3A6 140 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 NRN1Q9NPD7 142 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 MCUBQ9NWR8 336 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 RSL24D1Q9UHA3 163 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 LINC00588Q9Y4M8 146 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 TMEM56-RWDD3S4R434 201 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 UBR4Q5T4S7 5183 aa5.87□□□□□ -1.47
CTNNA1-215ENST00000519309 LOC102723971A0A1B0GUV8 181 aa5.86□□□□□ -1.47
CTNNA1-215ENST00000519309 A0A1W2PPQ1 181 aa5.86□□□□□ -1.47
CTNNA1-215ENST00000519309 CORTO00230 105 aa5.86□□□□□ -1.47
CTNNA1-215ENST00000519309 CLN5O75503 358 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms