RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 GSKIPQ9P0R6 139 aa4.6□□□□□ -1.67
MRPS28-203ENST00000518371 SORL1Q92673 2214 aa4.6□□□□□ -1.67
MRPS28-203ENST00000518371 IGHV3-49A0A0A0MS15 119 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 TRAV25A0A0B4J276 109 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 C15orf62A8K5M9 175 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 FAM25EA8MYX2 175 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 SCAF4O95104 1147 aaKnown RBP4.59□□□□□ -1.67
MRPS28-203ENST00000518371 SCGB1D2O95969 90 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 BMI1P35226 326 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 GPX4P36969 197 aaPredicted RBP4.59□□□□□ -1.67
MRPS28-203ENST00000518371 NKX2-1P43699 371 aaPredicted RBP4.59□□□□□ -1.67
MRPS28-203ENST00000518371 RND2P52198 227 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 DEFA1P59665 94 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 DEFA3P59666 94 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 CD81P60033 236 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 IAH1Q2TAA2 248 aaPredicted RBP4.59□□□□□ -1.67
MRPS28-203ENST00000518371 TIGITQ495A1 244 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 SPANXN5Q5MJ07 72 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 PRSS54Q6PEW0 395 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 TOMM20LQ6UXN7 152 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 SLC16A13Q7RTY0 426 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 TMEM61Q8N0U2 210 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 C12orf45Q8N5I9 185 aaPredicted RBP4.59□□□□□ -1.67
MRPS28-203ENST00000518371 TMEM116Q8NCL8 245 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 OR1S2Q8NGQ3 325 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 ZNF431Q8TF32 576 aaPredicted RBP4.59□□□□□ -1.67
MRPS28-203ENST00000518371 TMEM170AQ8WVE7 144 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 ACY3Q96HD9 319 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 SLC35E1Q96K37 410 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 NEURL2Q9BR09 285 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 SEC22CQ9BRL7 303 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 RHPN1-AS1Q9BWJ2 59 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 PSENENQ9NZ42 101 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 MRPL36Q9P0J6 103 aaKnown RBP4.59□□□□□ -1.67
MRPS28-203ENST00000518371 MLXQ9UH92 298 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 SMPXQ9UHP9 88 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 TBC1D24Q9ULP9 559 aa4.59□□□□□ -1.67
MRPS28-203ENST00000518371 PUS1Q9Y606 427 aaKnown RBP eCLIP4.59□□□□□ -1.67
MRPS28-203ENST00000518371 IGHV3OR16-13A0A075B7E8 117 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 IGHV3-74A0A0B4J1X5 117 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 IGHV7-4-1A0A0J9YVY3 117 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 C5orf51A6NDU8 294 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 MPTX1A8MV57 137 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 CCSO14618 274 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 CHEK1O14757 476 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 CD7P09564 240 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 FRMD6-AS1P0C7T7 363 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 NHLRC4P0CG21 123 aaPredicted RBP4.58□□□□□ -1.68
MRPS28-203ENST00000518371 IGHV4-30-4P0DP06 118 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 NPPCP23582 126 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 OR10J1P30954 320 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 YPEL3P61236 119 aaPredicted RBP4.58□□□□□ -1.68
MRPS28-203ENST00000518371 POLR2GP62487 172 aaKnown RBP eCLIP4.58□□□□□ -1.68
MRPS28-203ENST00000518371 IFITM3Q01628 133 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 ZBTB8BQ8NAP8 495 aaPredicted RBP4.58□□□□□ -1.68
MRPS28-203ENST00000518371 OR4D5Q8NGN0 318 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 NARS2Q96I59 477 aaKnown RBP4.58□□□□□ -1.68
MRPS28-203ENST00000518371 OR10C1Q96KK4 312 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 METTL26Q96S19 204 aa4.58□□□□□ -1.68
MRPS28-203ENST00000518371 GPN1Q9HCN4 374 aaPredicted RBP4.58□□□□□ -1.68
MRPS28-203ENST00000518371 STRAPQ9Y3F4 350 aaKnown RBP4.58□□□□□ -1.68
MRPS28-203ENST00000518371 IGKV3-7A0A075B6H7 116 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 IGHV3-66A0A0C4DH42 116 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 A0A1W2PS18 150 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 OR4C46A6NHA9 309 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 ZFP92A6NM28 416 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 OR11H12B2RN74 326 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 INMT-MINDY4F8WBC2 141 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 H3BP45 60 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 L7N2F9 121 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 TSPAN4O14817 238 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 SSSCA1O60232 199 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 IGKV1-17P01599 117 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 IL5P05113 134 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 CD5P06127 495 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 FABP1P07148 127 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 IGLC1P0CG04 106 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 RD3LP0DJH9 198 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 TFPI2P48307 235 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 VAMP2P63027 116 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 PAFAH1B2P68402 229 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 GAMTQ14353 236 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 GSG1LQ6UXU4 331 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 NRARPQ7Z6K4 114 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 DEFB125Q8N687 156 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 ST8SIA2Q92186 375 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 GRAMD2BQ96HH9 432 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 SMIM8Q96KF7 97 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 C2orf50Q96LR7 162 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 RAB40CQ96S21 281 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 RNF2Q99496 336 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 SPAG8Q99932 426 aaPredicted RBP4.57□□□□□ -1.68
MRPS28-203ENST00000518371 MLST8Q9BVC4 326 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 TMEM231Q9H6L2 316 aa4.57□□□□□ -1.68
MRPS28-203ENST00000518371 LSM5Q9Y4Y9 91 aaKnown RBP4.57□□□□□ -1.68
MRPS28-203ENST00000518371 SMCO3A2RU48 225 aa4.56□□□□□ -1.68
MRPS28-203ENST00000518371 SNRPGP15A8MWD9 76 aa4.56□□□□□ -1.68
MRPS28-203ENST00000518371 A8MZ25 164 aa4.56□□□□□ -1.68
MRPS28-203ENST00000518371 DNASE2O00115 360 aaPredicted RBP4.56□□□□□ -1.68
MRPS28-203ENST00000518371 PRAF2O60831 178 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms