RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 ACOT6Q3I5F7 207 aaPredicted RBP8.18□□□□□ -1.1
PABPC1-203ENST00000517921 CLLU1Q5K131 121 aa8.18□□□□□ -1.1
PABPC1-203ENST00000517921 CLEC19AQ6UXS0 136 aa8.18□□□□□ -1.1
PABPC1-203ENST00000517921 DPPA3Q6W0C5 159 aa8.18□□□□□ -1.1
PABPC1-203ENST00000517921 Q6ZRG5 221 aa8.18□□□□□ -1.1
PABPC1-203ENST00000517921 SSX7Q7RTT5 188 aa8.18□□□□□ -1.1
PABPC1-203ENST00000517921 FAM213BQ8TBF2 198 aa8.18□□□□□ -1.1
PABPC1-203ENST00000517921 LRRC20Q8TCA0 184 aa8.18□□□□□ -1.1
PABPC1-203ENST00000517921 SAT2Q96F10 170 aaPredicted RBP8.18□□□□□ -1.1
PABPC1-203ENST00000517921 RCC1LQ96I51 464 aaKnown RBP8.18□□□□□ -1.1
PABPC1-203ENST00000517921 CHRDL1Q9BU40 450 aa8.18□□□□□ -1.1
PABPC1-203ENST00000517921 C19orf24Q9BVV8 132 aa8.18□□□□□ -1.1
PABPC1-203ENST00000517921 GAR1Q9NY12 217 aaKnown RBP8.18□□□□□ -1.1
PABPC1-203ENST00000517921 SEC14L6B5MCN3 397 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 PPP5D1E7EU14 171 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 NUPL2O15504 423 aaKnown RBP8.17□□□□□ -1.1
PABPC1-203ENST00000517921 SCGB2A1O75556 95 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 TRBV12-3P01733 135 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 CLEC3BP05452 202 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 FABP1P07148 127 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 PSG1P11464 419 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 PLP1P60201 277 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 RAB14P61106 215 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 TCTEX1D4Q5JR98 221 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 PXDC1Q5TGL8 231 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 ZNF343Q6P1L6 599 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 FAM122CQ6P4D5 195 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 RPP25LQ8N5L8 163 aaKnown RBP8.17□□□□□ -1.1
PABPC1-203ENST00000517921 ZNF491Q8N8L2 437 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 OR5AU1Q8NGC0 362 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 OR10G4Q8NGN3 311 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 OR10G9Q8NGN4 311 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 OR10G7Q8NGN6 311 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 OR4F5Q8NH21 305 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 SLC25A22Q9H936 323 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 GNB4Q9HAV0 340 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 DOK5Q9P104 306 aa8.17□□□□□ -1.1
PABPC1-203ENST00000517921 CTXND1A0A1B0GTU2 59 aa8.16□□□□□ -1.1
PABPC1-203ENST00000517921 OR2C1O95371 312 aa8.16□□□□□ -1.1
PABPC1-203ENST00000517921 OR5G3P0C626 314 aa8.16□□□□□ -1.1
PABPC1-203ENST00000517921 RD3LP0DJH9 198 aa8.16□□□□□ -1.1
PABPC1-203ENST00000517921 CDC34P49427 236 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-203ENST00000517921 LYZP61626 148 aa8.16□□□□□ -1.1
PABPC1-203ENST00000517921 BLOC1S1P78537 153 aa8.16□□□□□ -1.1
PABPC1-203ENST00000517921 SPSB3Q6PJ21 355 aa8.16□□□□□ -1.1
PABPC1-203ENST00000517921 PATE2Q6UY27 113 aa8.16□□□□□ -1.1
PABPC1-203ENST00000517921 ZNF600Q6ZNG1 722 aa8.16□□□□□ -1.1
PABPC1-203ENST00000517921 OR4X2Q8NGF9 303 aa8.16□□□□□ -1.1
PABPC1-203ENST00000517921 OR51G1Q8NGK1 321 aa8.16□□□□□ -1.1
PABPC1-203ENST00000517921 TMEM37Q8WXS4 190 aa8.16□□□□□ -1.1
PABPC1-203ENST00000517921 DNHD1Q96M86 4753 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 WI2-2373I1.2A0A1W2PRP0 233 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 BMPR1BO00238 502 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 COX7A2P2O60397 106 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 EIF3GO75821 320 aaKnown RBP eCLIP8.15□□□□□ -1.1
PABPC1-203ENST00000517921 IL4P05112 153 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 LGALS1P09382 135 aaKnown RBP8.15□□□□□ -1.1
PABPC1-203ENST00000517921 ARL3P36405 182 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 PROK1P58294 105 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 FAM209BQ5JX69 171 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 SPATA31B1PQ5VZV4 182 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 OR1L4Q8NGR5 311 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 LYPD6BQ8NI32 183 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 GATAD1Q8WUU5 269 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 RNF125Q96EQ8 232 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 UBE2E2Q96LR5 201 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 PFDN5Q99471 154 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 ACTR3CQ9C0K3 210 aaPredicted RBP8.15□□□□□ -1.1
PABPC1-203ENST00000517921 ZFAND3Q9H8U3 227 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 RNF114Q9Y508 228 aa8.15□□□□□ -1.1
PABPC1-203ENST00000517921 PUS1Q9Y606 427 aaKnown RBP eCLIP8.15□□□□□ -1.1
PABPC1-203ENST00000517921 TENM1Q9UKZ4 2725 aa8.15□□□□□ -1.11
PABPC1-203ENST00000517921 IGHV3-35A0A0C4DH35 117 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 CLPSL1A2RUU4 121 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 ANKRD34BA5PLL1 514 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 MAP1LC3B2A6NCE7 125 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 HYPMO75409 117 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 H2AFB1P0C5Y9 115 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 ORM2P19652 201 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 RHOBP62745 196 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 RELQ04864 619 aaPredicted RBP8.14□□□□□ -1.11
PABPC1-203ENST00000517921 USF2Q15853 346 aaPredicted RBP8.14□□□□□ -1.11
PABPC1-203ENST00000517921 FAM78BQ5VT40 261 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 MORN5Q5VZ52 161 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 LCN15Q6UWW0 184 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 MIR17HGQ75NE6 70 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 OR1B1Q8NGR6 318 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 Q8WTZ3 238 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 MBD3L1Q8WWY6 194 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 RAB24Q969Q5 203 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 OR5B12Q96R08 314 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 RNF2Q99496 336 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 MRPL32Q9BYC8 188 aaKnown RBP8.14□□□□□ -1.11
PABPC1-203ENST00000517921 MAP1LC3BQ9GZQ8 125 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 SEPSECSQ9HD40 501 aaKnown RBP8.14□□□□□ -1.11
PABPC1-203ENST00000517921 DNAJC4Q9NNZ3 241 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 PEF1Q9UBV8 284 aaKnown RBP8.14□□□□□ -1.11
PABPC1-203ENST00000517921 FUT9Q9Y231 359 aa8.14□□□□□ -1.11
PABPC1-203ENST00000517921 ELOA3CA0A087WX78 387 aaPredicted RBP8.13□□□□□ -1.11
PABPC1-203ENST00000517921 TRAV1-1A0A0B4J248 108 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms