RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 YIPF6Q96EC8 236 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 CCDC115Q96NT0 180 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 OR2A7Q96R45 310 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 FAAP24Q9BTP7 215 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 NAGKQ9UJ70 344 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 RAB22AQ9UL26 194 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 ZNF706Q9Y5V0 76 aaPredicted RBP1.9□□□□□ -2.11
CPNE3-204ENST00000517862 IGHV3-49A0A0A0MS15 119 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 LOC389332A0A1B0GUA5 103 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 ARRDC5A6NEK1 342 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 OR2AT4A6NND4 320 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 IQCF6A8MYZ5 107 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 FTCDNL1E5RQL4 147 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 BPY2O14599 106 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 FFAR1O14842 300 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 ZNF207O43670 478 aaKnown RBP1.89□□□□□ -2.11
CPNE3-204ENST00000517862 PSMG1O95456 288 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 SEC11BP0C7V7 166 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 ZNF688P0C7X2 276 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 COX5BP10606 129 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 UCHL3P15374 230 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 ZNF32P17041 273 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 GABRA2P47869 451 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 POLR2HP52434 150 aaKnown RBP1.89□□□□□ -2.11
CPNE3-204ENST00000517862 BLVRAP53004 296 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 SLC18A1P54219 525 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 EMP1P54849 157 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 DLX6P56179 175 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 TPPP2P59282 170 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 PTGES3Q15185 160 aaKnown RBP1.89□□□□□ -2.11
CPNE3-204ENST00000517862 C4orf26Q17RF5 130 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 Q499Y3 187 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 DNAL1Q4LDG9 190 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 C2orf83Q53S99 150 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 ZNF684Q5T5D7 378 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 DRAM2Q6UX65 266 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 ZFP2Q6ZN57 461 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 ENTHD1Q8IYW4 607 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 OR5L1Q8NGL2 311 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 OR2T27Q8NH04 317 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 OR52E6Q96RD3 313 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 OR51E2Q9H255 320 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 TXNIPQ9H3M7 391 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 DIABLOQ9NR28 239 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 FBXO6Q9NRD1 293 aaPredicted RBP1.89□□□□□ -2.11
CPNE3-204ENST00000517862 PLEKHJ1Q9NW61 149 aa1.89□□□□□ -2.11
CPNE3-204ENST00000517862 IGHV7-4-1A0A0J9YVY3 117 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 C2orf70A6NJV1 201 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 C8orf87E5RJ46 101 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 CRXO43186 299 aaPredicted RBP1.88□□□□□ -2.11
CPNE3-204ENST00000517862 RBFOX2O43251 390 aaKnown RBP eCLIP1.88□□□□□ -2.11
CPNE3-204ENST00000517862 CRTAPO75718 401 aaPredicted RBP1.88□□□□□ -2.11
CPNE3-204ENST00000517862 CCNKO75909 580 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 IGKV1-39P01597 117 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 IGKV1D-39P04432 117 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 ZNF728P0DKX0 622 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 CGB7P0DN87 165 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 PIPP12273 146 aaPredicted RBP1.88□□□□□ -2.11
CPNE3-204ENST00000517862 MAGEA2P43356 314 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 TAS2R43P59537 309 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 PSG4Q00888 419 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 ASB16-AS1Q495Z4 193 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 LUZP6Q538Z0 58 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 TEX30Q5JUR7 227 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 ZFP1Q6P2D0 407 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 ZNF676Q8N7Q3 588 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 SLC25A29Q8N8R3 303 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 CMTM5Q96DZ9 223 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 NARS2Q96I59 477 aaKnown RBP1.88□□□□□ -2.11
CPNE3-204ENST00000517862 OR10C1Q96KK4 312 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 RBP7Q96R05 134 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 ANAPC13Q9BS18 74 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 NDFIP1Q9BT67 221 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 TMEM133Q9H2Q1 129 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 PARP11Q9NR21 331 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 C21orf62Q9NYP8 219 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 PSORS1C2Q9UIG4 136 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 CBY1Q9Y3M2 126 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 TMEM14AQ9Y6G1 99 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 S4R3C0 116 aa1.88□□□□□ -2.11
CPNE3-204ENST00000517862 TRAV8-2A0A0B4J237 113 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 IGKV1-6A0A0C4DH72 117 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 TRAPPC13A5PLN9 417 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 METTL15A6NJ78 407 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 OOSP1A8MZH6 123 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 C9JCJ5 164 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 F5H768 121 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 PLIN3O60664 434 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 HPGDSO60760 199 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 PDCD6O75340 191 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 HLA-DQA1P01909 254 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 RBP4P02753 201 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 TFPTP0C1Z6 253 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 S100A2P29034 98 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 REG1BP48304 166 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 IDH2P48735 452 aaKnown RBP1.87□□□□□ -2.11
CPNE3-204ENST00000517862 SSX1Q16384 188 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 KLHL12Q53G59 568 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 YIF1BQ5BJH7 314 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 UBE2NLQ5JXB2 153 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms