RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CCL28Q9NRJ3 127 aa2.14□□□□□ -2.07
SKP1-204ENST00000517691 SLC2A9Q9NRM0 540 aa2.14□□□□□ -2.07
SKP1-204ENST00000517691 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.14□□□□□ -2.07
SKP1-204ENST00000517691 TAS2R8Q9NYW2 309 aa2.14□□□□□ -2.07
SKP1-204ENST00000517691 MTFP1Q9UDX5 166 aa2.14□□□□□ -2.07
SKP1-204ENST00000517691 LINC00527Q9UJ94 153 aa2.14□□□□□ -2.07
SKP1-204ENST00000517691 WASHC3Q9Y3C0 194 aa2.14□□□□□ -2.07
SKP1-204ENST00000517691 TENM1Q9UKZ4 2725 aa2.14□□□□□ -2.07
SKP1-204ENST00000517691 TGIF2-C20orf24A0A0A6YYL0 155 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 IGLV9-49A0A0B4J1Y8 123 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 DISC1C4P0D8 188 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 PGLYRP1O75594 196 aaPredicted RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 CRYZL1O95825 349 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 AKAIN1P0CW23 69 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 TBPP20226 339 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 CRYBA4P53673 196 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 TAS2R19P59542 299 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 ARL16Q0P5N6 197 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 AKIRIN2Q53H80 203 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 AADACL3Q5VUY0 350 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 ZNF57Q68EA5 555 aaPredicted RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 FAAP20Q6NZ36 180 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 LPCAT3Q6P1A2 487 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 ZNF818PQ6ZRF7 136 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 SLC35E3Q7Z769 313 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 PDPNQ86YL7 162 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 TOMM5Q8N4H5 51 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 Q8N6K4 173 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 Q8N9W7 124 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 TMEM229BQ8NBD8 167 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 OR2D3Q8NGH3 330 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 OR4D10Q8NGI6 311 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 OR51H1Q8NH63 302 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 SMIM4Q8WVI0 70 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 BORCS5Q969J3 196 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 EEF1AKMT3Q96AZ1 226 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 URB1-AS1Q96HZ7 61 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 NOL4LQ96MY1 436 aaPredicted RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 FAM218AQ96MZ4 157 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 TSNAXQ99598 290 aaKnown RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 HSD17B10Q99714 261 aaKnown RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 QTRT1Q9BXR0 403 aaKnown RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 FBXL15Q9H469 300 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 PARP11Q9NR21 331 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 PLSCR3Q9NRY6 295 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 METTL1Q9UBP6 276 aaKnown RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 ANAPC10Q9UM13 185 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 STAB1Q9NY15 2570 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 DOCK11Q5JSL3 2073 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 TCRBV4S1A1TA0A5B7 111 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 K7EMT4 169 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 GPR31O00270 319 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 BUB3O43684 328 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 GSTZ1O43708 216 aaPredicted RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 CDK2AP2O75956 126 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 HRASP01112 189 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 GCGP01275 180 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 CD28P10747 220 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 PVALBP20472 110 aaPredicted RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 VDAC1P21796 283 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 S100A1P23297 94 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 KIR2DS2P43631 304 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 LGALS7P47929 136 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 TAS2R60P59551 318 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 KRTAP10-3P60369 221 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 RPL30P62888 115 aaKnown RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 RPL24P83731 157 aaKnown RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 SSBP1Q04837 148 aaKnown RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 CATR1Q13166 79 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 SRSF9Q13242 221 aaKnown RBP eCLIP2.13□□□□□ -2.07
SKP1-204ENST00000517691 POU2AF1Q16633 256 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 C4orf26Q17RF5 130 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 CNPY1Q3B7I2 92 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 NSUN5P1Q3KNT7 163 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 VMA21Q3ZAQ7 101 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 VAX1Q5SQQ9 334 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 TRIQKQ629K1 86 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 ZNF660Q6AZW8 331 aaPredicted RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 PVRIGQ6DKI7 326 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 IDO2Q6ZQW0 420 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 Q6ZVH6 145 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 ZNF329Q86UD4 541 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 CBLN2Q8IUK8 224 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 Q8N2B8 174 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 FAM71E2Q8N5Q1 922 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 NPBQ8NG41 125 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 OR4S2Q8NH73 311 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 TERB2Q8NHR7 220 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 GRPEL2Q8TAA5 225 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 ZFAND1Q8TCF1 268 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 UBE2E2Q96LR5 201 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 PHB2Q99623 299 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 SDHCQ99643 169 aaPredicted RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 RNF5Q99942 180 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 SOSTQ9BQB4 213 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 HSPB9Q9BQS6 159 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 SMPXQ9UHP9 88 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 SCP2D1Q9UJQ7 156 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 C14orf166Q9Y224 244 aaKnown RBP2.13□□□□□ -2.07
SKP1-204ENST00000517691 WSB1Q9Y6I7 421 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms