RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 NCOA6Q14686 2063 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-203ENST00000517490 IGHV2-70DA0A0C4DH43 119 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 P0C879 139 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 RNASE2P10153 161 aaKnown RBP5.45□□□□□ -1.54
CPNE3-203ENST00000517490 ORMDL3Q8N138 153 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 OR10W1Q8NGF6 305 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 F11RQ9Y624 299 aaKnown RBP5.45□□□□□ -1.54
CPNE3-203ENST00000517490 RP1L1Q8IWN7 2480 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-203ENST00000517490 C2orf16Q68DN1 1984 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 LY6G6EA0A0G2JKS1 128 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 C15orf65H3BRN8 121 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 CCL8P80075 99 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 PEAR1Q5VY43 1037 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-203ENST00000517490 OR1N2Q8NGR9 330 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 RPUSD1Q9UJJ7 312 aaKnown RBP5.45□□□□□ -1.54
CPNE3-203ENST00000517490 U3KQA8 63 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 AHCTF1Q8WYP5 2266 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 IGKV1D-17A0A075B6S4 117 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 A0A087X0K7 114 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 FAM231BA6NCW3 169 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 PSG9Q00887 426 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 FAM201AQ5SY85 155 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 SP5Q6BEB4 398 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-203ENST00000517490 FAM216BQ8N7L0 139 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 LINC00479Q96M42 142 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 ZNF492Q9P255 531 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 SPRR3Q9UBC9 169 aa5.45□□□□□ -1.54
CPNE3-203ENST00000517490 ADAMTS9Q9P2N4 1935 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 NCBP2LA6PVI3 153 aaKnown RBP5.44□□□□□ -1.54
CPNE3-203ENST00000517490 TOMM40O96008 361 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 MYOD1P15172 320 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 COX7A1P24310 79 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 TIMM23BQ5SRD1 257 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 SAMD13Q5VXD3 122 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 PCNX3Q9H6A9 2034 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 CEP290O15078 2479 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 A0A1B0GV72 72 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 HBDP02042 147 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 TCRAP04437 139 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 CEACAM3P40198 252 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 RNASE8Q8TDE3 154 aaKnown RBP5.44□□□□□ -1.54
CPNE3-203ENST00000517490 TIMD4Q96H15 378 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 CHTOPQ9Y3Y2 248 aaKnown RBP5.44□□□□□ -1.54
CPNE3-203ENST00000517490 HILPDAQ9Y5L2 63 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 ESPL1Q14674 2120 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 KIAA2026Q5HYC2 2103 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 EML5Q05BV3 1969 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 IGHV3-72A0A0B4J1Y9 119 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 K7EP13 123 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 OR2J3O76001 311 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 RIPPLY3P57055 190 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 RBPJQ06330 500 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 TEX45Q8NA69 505 aa5.44□□□□□ -1.54
CPNE3-203ENST00000517490 IGHV1-18A0A0C4DH31 117 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 C8orf46Q8TAG6 207 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 TMEM167AQ8TBQ9 72 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 ASCL2Q99929 193 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 SLC25A2Q9BXI2 301 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 RAB1BQ9H0U4 201 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 KNTC1P50748 2209 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 FOXC1Q12948 553 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 BVES-AS1Q5T3Y7 98 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 RPRMLQ8N4K4 120 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 BRWD1Q9NSI6 2320 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 A0A0G2JLM5 398 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 M0QZ24 198 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 THBDP07204 575 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 FCGR2BP31994 310 aaPredicted RBP5.43□□□□□ -1.54
CPNE3-203ENST00000517490 TRGV9Q99603 122 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 IGHV1-24A0A0C4DH33 117 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 IGKV3-15P01624 115 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 POU2AF1Q16633 256 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 C9orf106Q8NAJ2 232 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 PRDM6Q9NQX0 595 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 ONECUT1Q9UBC0 465 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 UFC1Q9Y3C8 167 aa5.43□□□□□ -1.54
CPNE3-203ENST00000517490 C10orf142B7Z368 130 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 C9orf172C9J069 976 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 APC2O95996 2303 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 CACNG7P62955 275 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 GUSBP1Q15486 140 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 FAM71F2Q6NXP2 309 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 EBLN2Q6P2I7 272 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 ZNF883P0CG24 379 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 RPL7P18124 248 aaKnown RBP5.42□□□□□ -1.54
CPNE3-203ENST00000517490 MLANAQ16655 118 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 DEFB125Q8N687 156 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 HIST1H4GQ99525 98 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 PSG8Q9UQ74 426 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 SCGB1C2P0DMR2 95 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 S100A4P26447 101 aaKnown RBP5.42□□□□□ -1.54
CPNE3-203ENST00000517490 CEACAM8P31997 349 aaPredicted RBP5.42□□□□□ -1.54
CPNE3-203ENST00000517490 SCGB1D4Q6XE38 83 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 MDS2Q8NDY4 140 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 IFI27L1Q96BM0 104 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 TP53TG3Q9ULZ0 132 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 H3BRM9 83 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 SP9P0CG40 484 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 COX8AP10176 69 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 PAX2Q02962 417 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms