RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 SPANXN5Q5MJ07 72 aa10.4□□□□□ -0.74
PDGFRB-202ENST00000517488 C16orf54Q6UWD8 224 aa10.4□□□□□ -0.74
PDGFRB-202ENST00000517488 STXBP6Q8NFX7 210 aa10.4□□□□□ -0.74
PDGFRB-202ENST00000517488 OR4D5Q8NGN0 318 aa10.4□□□□□ -0.74
PDGFRB-202ENST00000517488 MITD1Q8WV92 249 aa10.4□□□□□ -0.74
PDGFRB-202ENST00000517488 GLMPQ8WWB7 406 aa10.4□□□□□ -0.74
PDGFRB-202ENST00000517488 CCDC32Q9BV29 185 aa10.4□□□□□ -0.74
PDGFRB-202ENST00000517488 DNAH1Q9P2D7 4330 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 KIR2DL5BA0A0G2JN68 375 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 KIR2DL5BA0A0G2JPC4 375 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 PRSS46E5RG02 174 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 K7EQG2 157 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 TCRBP04435 133 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 RPP30P78346 268 aaKnown RBP10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 DEFB135Q30KP9 77 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 LEMD1Q68G75 181 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 LINC00299Q6ZSB3 139 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 Q6ZWC4 215 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 KIR2DL5AQ8N109 375 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 STPG3Q8N7X2 389 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 KIR2DL5BQ8NHK3 375 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 GRAMD2BQ96HH9 432 aa10.39□□□□□ -0.75
PDGFRB-202ENST00000517488 TRAV6A0A075B6T7 132 aa10.38□□□□□ -0.75
PDGFRB-202ENST00000517488 IGKV1OR2-108A0A075B7D4 117 aa10.38□□□□□ -0.75
PDGFRB-202ENST00000517488 UBE2CO00762 179 aa10.38□□□□□ -0.75
PDGFRB-202ENST00000517488 BUB3O43684 328 aa10.38□□□□□ -0.75
PDGFRB-202ENST00000517488 NKX2-1P43699 371 aaPredicted RBP10.38□□□□□ -0.75
PDGFRB-202ENST00000517488 OR2F1Q13607 317 aa10.38□□□□□ -0.75
PDGFRB-202ENST00000517488 DCANP1Q8TF63 244 aa10.38□□□□□ -0.75
PDGFRB-202ENST00000517488 RNF125Q96EQ8 232 aa10.38□□□□□ -0.75
PDGFRB-202ENST00000517488 PBDC1Q9BVG4 233 aa10.38□□□□□ -0.75
PDGFRB-202ENST00000517488 NUDT15Q9NV35 164 aa10.38□□□□□ -0.75
PDGFRB-202ENST00000517488 TBC1D24Q9ULP9 559 aa10.38□□□□□ -0.75
PDGFRB-202ENST00000517488 STRAPQ9Y3F4 350 aaKnown RBP10.38□□□□□ -0.75
PDGFRB-202ENST00000517488 HELTA6NFD8 242 aa10.37□□□□□ -0.75
PDGFRB-202ENST00000517488 SPRY2O43597 315 aa10.37□□□□□ -0.75
PDGFRB-202ENST00000517488 SSSCA1O60232 199 aa10.37□□□□□ -0.75
PDGFRB-202ENST00000517488 ZNF688P0C7X2 276 aa10.37□□□□□ -0.75
PDGFRB-202ENST00000517488 IAH1Q2TAA2 248 aaPredicted RBP10.37□□□□□ -0.75
PDGFRB-202ENST00000517488 THAP8Q8NA92 274 aa10.37□□□□□ -0.75
PDGFRB-202ENST00000517488 S100ZQ8WXG8 99 aa10.37□□□□□ -0.75
PDGFRB-202ENST00000517488 TRGV9Q99603 122 aa10.37□□□□□ -0.75
PDGFRB-202ENST00000517488 LYSTQ99698 3801 aa10.37□□□□□ -0.75
PDGFRB-202ENST00000517488 SEC22CQ9BRL7 303 aa10.37□□□□□ -0.75
PDGFRB-202ENST00000517488 CSTL1Q9H114 145 aa10.37□□□□□ -0.75
PDGFRB-202ENST00000517488 PSENENQ9NZ42 101 aa10.37□□□□□ -0.75
PDGFRB-202ENST00000517488 TP53TG1Q9Y2A0 90 aa10.37□□□□□ -0.75
PDGFRB-202ENST00000517488 SCGB1D2O95969 90 aa10.36□□□□□ -0.75
PDGFRB-202ENST00000517488 EIF2B2P49770 351 aaKnown RBP10.36□□□□□ -0.75
PDGFRB-202ENST00000517488 PAX9P55771 341 aa10.36□□□□□ -0.75
PDGFRB-202ENST00000517488 LYZP61626 148 aa10.36□□□□□ -0.75
PDGFRB-202ENST00000517488 ZBTB8BQ8NAP8 495 aaPredicted RBP10.36□□□□□ -0.75
PDGFRB-202ENST00000517488 RNF183Q96D59 192 aa10.36□□□□□ -0.75
PDGFRB-202ENST00000517488 SMIM8Q96KF7 97 aa10.36□□□□□ -0.75
PDGFRB-202ENST00000517488 GSKIPQ9P0R6 139 aa10.36□□□□□ -0.75
PDGFRB-202ENST00000517488 TENM2Q9NT68 2774 aa10.36□□□□□ -0.75
PDGFRB-202ENST00000517488 FAM240BA0A1B0GVZ2 78 aa10.35□□□□□ -0.75
PDGFRB-202ENST00000517488 PMS2P5A8MQ11 134 aa10.35□□□□□ -0.75
PDGFRB-202ENST00000517488 SNRPGP15A8MWD9 76 aa10.35□□□□□ -0.75
PDGFRB-202ENST00000517488 CCSO14618 274 aa10.35□□□□□ -0.75
PDGFRB-202ENST00000517488 CCNKO75909 580 aa10.35□□□□□ -0.75
PDGFRB-202ENST00000517488 FABP1P07148 127 aa10.35□□□□□ -0.75
PDGFRB-202ENST00000517488 H2AFB2P0C5Z0 115 aa10.35□□□□□ -0.75
PDGFRB-202ENST00000517488 AP2S1P53680 142 aaPredicted RBP10.35□□□□□ -0.75
PDGFRB-202ENST00000517488 OR8G2PQ6IF36 304 aa10.35□□□□□ -0.75
PDGFRB-202ENST00000517488 SIGLEC15Q6ZMC9 328 aa10.35□□□□□ -0.75
PDGFRB-202ENST00000517488 TMEM182Q6ZP80 229 aaPredicted RBP10.35□□□□□ -0.75
PDGFRB-202ENST00000517488 ACOT7LQ6ZUV0 252 aa10.35□□□□□ -0.75
PDGFRB-202ENST00000517488 ZNF431Q8TF32 576 aaPredicted RBP10.35□□□□□ -0.75
PDGFRB-202ENST00000517488 KNCNA6PVL3 124 aa10.34□□□□□ -0.75
PDGFRB-202ENST00000517488 GATA2P23769 480 aaPredicted RBP10.34□□□□□ -0.75
PDGFRB-202ENST00000517488 AKR1C1Q04828 323 aa10.34□□□□□ -0.75
PDGFRB-202ENST00000517488 ASAH1Q13510 395 aa10.34□□□□□ -0.75
PDGFRB-202ENST00000517488 TMEM14EPQ6UXP3 125 aa10.34□□□□□ -0.75
PDGFRB-202ENST00000517488 PTTG2Q9NZH5 202 aa10.34□□□□□ -0.75
PDGFRB-202ENST00000517488 RCL1Q9Y2P8 373 aaKnown RBP10.34□□□□□ -0.75
PDGFRB-202ENST00000517488 ALMS1Q8TCU4 4167 aa10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 A0A0J9YWU9 116 aa10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 FAM25EA8MYX2 175 aa10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 MBPP02686 304 aaPredicted RBP10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 METTL15P1P0C7V9 234 aa10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 NUP62P37198 522 aaPredicted RBP10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 IFITM3Q01628 133 aa10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 EWSR1Q01844 656 aaKnown RBP eCLIP10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 PSMG4Q5JS54 123 aa10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 MZT2BQ6NZ67 158 aa10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 GSG1LQ6UXU4 331 aa10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 STHQ8IWL8 128 aa10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 RAB40CQ96S21 281 aa10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 WDR12Q9GZL7 423 aaKnown RBP10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 NRN1Q9NPD7 142 aa10.33□□□□□ -0.76
PDGFRB-202ENST00000517488 HYDINQ4G0P3 5121 aa10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 SMCO3A2RU48 225 aa10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 UPK1BO75841 260 aa10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 CA1P00915 261 aaPredicted RBP10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 GIG44P09565 113 aaPredicted RBP10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 TAS2R30P59541 319 aa10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 RRAS2P62070 204 aaPredicted RBP10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 ZNF846Q147U1 533 aa10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 ACTL10Q5JWF8 245 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms