RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 FABP12A6NFH5 140 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 FAM25AB3EWG3 89 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 FAM25CB3EWG5 89 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 FAM25GB3EWG6 89 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 UPK1BO75841 260 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 CD5P06127 495 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 HLA-DRB4P13762 266 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 OR10J1P30954 320 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 S100A5P33763 92 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 HOXA1P49639 335 aaPredicted RBP5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 AKR1C2P52895 323 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 EMP1P54849 157 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 SPCS3P61009 180 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 YPEL3P61236 119 aaPredicted RBP5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 SUPT4H1P63272 117 aaKnown RBP5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 LGALS9BQ3B8N2 356 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 NMSQ5H8A3 153 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 LPCAT3Q6P1A2 487 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 AMTNQ6UX39 209 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 LINC00336Q6ZUF6 198 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 CROCCP3Q8IVE0 287 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 ARRDC1Q8N5I2 433 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 EXTL2Q9UBQ6 330 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 DKK2Q9UBU2 259 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 GPR132Q9UNW8 380 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 HLA-DRB4X5D2U9 266 aa5.84□□□□□ -1.47
SCARNA20.3-201ENST00000516913 PLAC8L1A1L4L8 177 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 PLA2G10O15496 165 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 CRXO43186 299 aaPredicted RBP5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 IL4P05112 153 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 HNRNPCP07910 306 aaKnown RBP eCLIP5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 TNP2Q05952 138 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 FAM222AQ5U5X8 452 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 IGFL4Q6B9Z1 124 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 MZT2AQ6P582 158 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 Q6ZNX1 250 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 LYZL2Q7Z4W2 148 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 TMEM229BQ8NBD8 167 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 OR52E5Q8NH55 327 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 AP3S1Q92572 193 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 ZNF486Q96H40 463 aaPredicted RBP5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 ACY3Q96HD9 319 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 NEU1Q99519 415 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 NAA60Q9H7X0 242 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 NRN1Q9NPD7 142 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 TMEM56-RWDD3S4R434 201 aa5.83□□□□□ -1.48
SCARNA20.3-201ENST00000516913 IGHV3OR16-12A0A075B7B8 117 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 TRAV8-2A0A0B4J237 113 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 TEX13DA0A0J9YY54 714 aaPredicted RBP5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 A0A1W2PS18 150 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 TOMM40O96008 361 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 IL7P13232 177 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 AZU1P20160 251 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 GAMTQ14353 236 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 FCN2Q15485 313 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 TRIM16LQ309B1 348 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 RNASE10Q5GAN6 216 aaKnown RBP5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 SPANXN2Q5MJ10 180 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 TMEM88Q6PEY1 159 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 SIGLEC15Q6ZMC9 328 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 FAM219AQ8IW50 185 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 CENPSQ8N2Z9 138 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 OR4C16Q8NGL9 310 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 OR1S2Q8NGQ3 325 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 KRTAP1-5Q9BYS1 174 aa5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 SAV1Q9H4B6 383 aaPredicted RBP5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 HEYLQ9NQ87 328 aaPredicted RBP5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.82□□□□□ -1.48
SCARNA20.3-201ENST00000516913 LRP1Q07954 4544 aaKnown RBP5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 LINC00854A0A1B0GVQ3 168 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 CRYM-AS1A6NIL9 109 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 A8MTW9 85 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 PRSS46E5RG02 174 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 RAB3DO95716 219 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 RD3LP0DJH9 198 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 GATA2P23769 480 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 HTR2BP41595 481 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 NKX2-1P43699 371 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 OR2F1Q13607 317 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 IL18Q14116 193 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 OXA1LQ15070 435 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 SCGB2B2Q4G0G5 96 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 PYDC2Q56P42 97 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 FAM78BQ5VT40 261 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 TMEM268Q5VZI3 342 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 STEAP1BQ6NZ63 245 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 SLC24A4Q8NFF2 622 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 Q8WTZ3 238 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 RNF125Q96EQ8 232 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 NDUFAF3Q9BU61 184 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 CCDC32Q9BV29 185 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 RBKSQ9H477 322 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 TMEM231Q9H6L2 316 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 COPZ2Q9P299 210 aa5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 DMBT1Q9UGM3 2413 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.3-201ENST00000516913 A0A0J9YX75 114 aa5.8□□□□□ -1.48
SCARNA20.3-201ENST00000516913 CORTO00230 105 aa5.8□□□□□ -1.48
SCARNA20.3-201ENST00000516913 PITX3O75364 302 aa5.8□□□□□ -1.48
SCARNA20.3-201ENST00000516913 P0DMU3 169 aa5.8□□□□□ -1.48
SCARNA20.3-201ENST00000516913 FAM231AP0DMU4 169 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms