RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 TNS3Q68CZ2 1445 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 CASP8AP2Q9UKL3 1982 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 ZNF106Q9H2Y7 1883 aaKnown RBP0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 J3QRK9 145 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 SERPINA6P08185 405 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 AP3S2P59780 193 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 CIRBPQ14011 172 aaKnown RBP0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 C2orf82Q6UX34 121 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 OR6V1Q8N148 313 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 SLC30A7Q8NEW0 376 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 OR2T35Q8NGX2 323 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 CT55Q8WUE5 264 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 SLAMF6Q96DU3 332 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 GPER1Q99527 375 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 PLAC8Q9NZF1 115 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 FBXO5Q9UKT4 447 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 CHCHD2Q9Y6H1 151 aaPredicted RBP0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 ALPK3Q96L96 1907 aa0.23□□□□□ -2.37
SMARCA5-203ENST00000515531 KDM6AO15550 1401 aaPredicted RBP0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 IGLV3-32A0A0A0MS00 114 aa0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 SMIM23A6NLE4 172 aa0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 CLDN24A6NM45 220 aa0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 CYB5BO43169 146 aa0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 SERPINE1P05121 402 aa0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 PPIBP23284 216 aaKnown RBP0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 KRTAP26-1Q6PEX3 210 aa0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 HAGHLQ6PII5 290 aaPredicted RBP0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 CLDN22Q8N7P3 220 aa0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 FAM172AQ8WUF8 416 aa0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 BORCS7Q96B45 105 aa0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 ADAT3Q96EY9 351 aaPredicted RBP0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 TP53RKQ96S44 253 aa0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 NOSIPQ9Y314 301 aaKnown RBP0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 SNRNP200O75643 2136 aaKnown RBP0.22□□□□□ -2.37
SMARCA5-203ENST00000515531 RIMBP3CA6NJZ7 1639 aa0.21□□□□□ -2.38
SMARCA5-203ENST00000515531 RIMBP3BA6NNM3 1639 aa0.21□□□□□ -2.38
SMARCA5-203ENST00000515531 RIMBP3Q9UFD9 1639 aa0.21□□□□□ -2.38
SMARCA5-203ENST00000515531 NAV2Q8IVL1 2488 aa0.21□□□□□ -2.38
SMARCA5-203ENST00000515531 hCG_1818297A0A087WSY0 165 aa0.21□□□□□ -2.38
SMARCA5-203ENST00000515531 A8MT66 165 aa0.21□□□□□ -2.38
SMARCA5-203ENST00000515531 CNIH1O95406 144 aa0.21□□□□□ -2.38
SMARCA5-203ENST00000515531 DYNLT1P63172 113 aa0.21□□□□□ -2.38
SMARCA5-203ENST00000515531 C12orf74Q32Q52 190 aa0.21□□□□□ -2.38
SMARCA5-203ENST00000515531 LINC00052Q96N35 136 aa0.21□□□□□ -2.38
SMARCA5-203ENST00000515531 KIAA1549Q9HCM3 1950 aa0.2□□□□□ -2.38
SMARCA5-203ENST00000515531 A0A0D9SG42 100 aa0.2□□□□□ -2.38
SMARCA5-203ENST00000515531 hADV38S2A0JD32 116 aa0.2□□□□□ -2.38
SMARCA5-203ENST00000515531 TIMM17BO60830 172 aa0.2□□□□□ -2.38
SMARCA5-203ENST00000515531 SMIM17P0DL12 118 aa0.2□□□□□ -2.38
SMARCA5-203ENST00000515531 EIF5AP63241 154 aaKnown RBP0.2□□□□□ -2.38
SMARCA5-203ENST00000515531 OR52L1Q8NGH7 329 aa0.2□□□□□ -2.38
SMARCA5-203ENST00000515531 LINC00467Q9BRT7 94 aa0.2□□□□□ -2.38
SMARCA5-203ENST00000515531 PRADC1Q9BSG0 188 aa0.2□□□□□ -2.38
SMARCA5-203ENST00000515531 M0R378 163 aa0.19□□□□□ -2.38
SMARCA5-203ENST00000515531 OMPP47874 163 aa0.19□□□□□ -2.38
SMARCA5-203ENST00000515531 EXOC3-AS1Q8N2X6 119 aa0.19□□□□□ -2.38
SMARCA5-203ENST00000515531 C12orf45Q8N5I9 185 aaPredicted RBP0.19□□□□□ -2.38
SMARCA5-203ENST00000515531 SLC25A40Q8TBP6 338 aa0.19□□□□□ -2.38
SMARCA5-203ENST00000515531 PSTPIP2Q9H939 334 aa0.19□□□□□ -2.38
SMARCA5-203ENST00000515531 TVP23BQ9NYZ1 205 aa0.19□□□□□ -2.38
SMARCA5-203ENST00000515531 IDI2-AS1Q9NZ38 188 aa0.19□□□□□ -2.38
SMARCA5-203ENST00000515531 PLXND1Q9Y4D7 1925 aa0.19□□□□□ -2.38
SMARCA5-203ENST00000515531 C8GP07360 202 aa0.18□□□□□ -2.38
SMARCA5-203ENST00000515531 SRP14P37108 136 aaKnown RBP0.18□□□□□ -2.38
SMARCA5-203ENST00000515531 IMPG1Q17R60 797 aa0.18□□□□□ -2.38
SMARCA5-203ENST00000515531 IAH1Q2TAA2 248 aaPredicted RBP0.18□□□□□ -2.38
SMARCA5-203ENST00000515531 Q8IYB0 196 aa0.18□□□□□ -2.38
SMARCA5-203ENST00000515531 PSMF1Q92530 271 aa0.18□□□□□ -2.38
SMARCA5-203ENST00000515531 RNF122Q9H9V4 155 aa0.18□□□□□ -2.38
SMARCA5-203ENST00000515531 CD2P06729 351 aa0.17□□□□□ -2.38
SMARCA5-203ENST00000515531 SPINK7P58062 85 aa0.17□□□□□ -2.38
SMARCA5-203ENST00000515531 LYRM7Q5U5X0 104 aa0.17□□□□□ -2.38
SMARCA5-203ENST00000515531 C4orf22Q6V702 233 aa0.17□□□□□ -2.38
SMARCA5-203ENST00000515531 ARHGEF28Q8N1W1 1705 aaKnown RBP0.17□□□□□ -2.38
SMARCA5-203ENST00000515531 TSKUQ8WUA8 353 aa0.17□□□□□ -2.38
SMARCA5-203ENST00000515531 CCDC42Q96M95 316 aa0.17□□□□□ -2.38
SMARCA5-203ENST00000515531 MED29Q9NX70 200 aa0.17□□□□□ -2.38
SMARCA5-203ENST00000515531 RTL1A6NKG5 1358 aa0.17□□□□□ -2.38
SMARCA5-203ENST00000515531 H3BRM9 83 aa0.16□□□□□ -2.38
SMARCA5-203ENST00000515531 Q6Q795 121 aa0.16□□□□□ -2.38
SMARCA5-203ENST00000515531 GRINAQ7Z429 371 aa0.16□□□□□ -2.38
SMARCA5-203ENST00000515531 TEN1Q86WV5 123 aa0.16□□□□□ -2.38
SMARCA5-203ENST00000515531 TRAPPC5Q8IUR0 188 aa0.16□□□□□ -2.38
SMARCA5-203ENST00000515531 CANT1Q8WVQ1 401 aa0.16□□□□□ -2.38
SMARCA5-203ENST00000515531 TRIM4Q9C037 500 aa0.16□□□□□ -2.38
SMARCA5-203ENST00000515531 TMEM138Q9NPI0 162 aa0.16□□□□□ -2.38
SMARCA5-203ENST00000515531 PCTPQ9UKL6 214 aa0.16□□□□□ -2.38
SMARCA5-203ENST00000515531 PHRF1Q9P1Y6 1649 aaKnown RBP0.16□□□□□ -2.38
SMARCA5-203ENST00000515531 TRGV10A0A0A0MS01 117 aa0.15□□□□□ -2.39
SMARCA5-203ENST00000515531 F8W1H4 67 aa0.15□□□□□ -2.39
SMARCA5-203ENST00000515531 KRTAP2-3P0C7H8 128 aa0.15□□□□□ -2.39
SMARCA5-203ENST00000515531 ZNF833PQ6ZTB9 187 aa0.15□□□□□ -2.39
SMARCA5-203ENST00000515531 OR5D14Q8NGL3 314 aa0.15□□□□□ -2.39
SMARCA5-203ENST00000515531 KRTAP2-4Q9BYR9 128 aa0.15□□□□□ -2.39
SMARCA5-203ENST00000515531 KRTAP2-1Q9BYU5 128 aa0.15□□□□□ -2.39
SMARCA5-203ENST00000515531 TMEM133Q9H2Q1 129 aa0.15□□□□□ -2.39
SMARCA5-203ENST00000515531 A0A087WUJ7 227 aa0.14□□□□□ -2.39
SMARCA5-203ENST00000515531 TRAV10A0A0B4J240 114 aa0.14□□□□□ -2.39
SMARCA5-203ENST00000515531 K7EIL1 84 aa0.14□□□□□ -2.39
SMARCA5-203ENST00000515531 PDE6DO43924 150 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms