RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 GLMPQ8WWB7 406 aa10.01□□□□□ -0.81
TCOF1-215ENST00000515516 TRIM63Q969Q1 353 aa10.01□□□□□ -0.81
TCOF1-215ENST00000515516 KNCNA6PVL3 124 aa10□□□□□ -0.81
TCOF1-215ENST00000515516 SLC25A6P12236 298 aa10□□□□□ -0.81
TCOF1-215ENST00000515516 PSMG4Q5JS54 123 aa10□□□□□ -0.81
TCOF1-215ENST00000515516 SIGLEC15Q6ZMC9 328 aa10□□□□□ -0.81
TCOF1-215ENST00000515516 TRPT1Q86TN4 253 aaKnown RBP10□□□□□ -0.81
TCOF1-215ENST00000515516 CENPSQ8N2Z9 138 aa10□□□□□ -0.81
TCOF1-215ENST00000515516 DCANP1Q8TF63 244 aa10□□□□□ -0.81
TCOF1-215ENST00000515516 LINC00476Q8WZB0 136 aa10□□□□□ -0.81
TCOF1-215ENST00000515516 PBDC1Q9BVG4 233 aa10□□□□□ -0.81
TCOF1-215ENST00000515516 C11orf68Q9H3H3 251 aaKnown RBP10□□□□□ -0.81
TCOF1-215ENST00000515516 FBXL17Q9UF56 701 aa10□□□□□ -0.81
TCOF1-215ENST00000515516 V9GYH0 126 aa10□□□□□ -0.81
TCOF1-215ENST00000515516 FAM90A26D6RGX4 464 aa9.99□□□□□ -0.81
TCOF1-215ENST00000515516 IAPPP10997 89 aa9.99□□□□□ -0.81
TCOF1-215ENST00000515516 GAMTQ14353 236 aa9.99□□□□□ -0.81
TCOF1-215ENST00000515516 LRTM2Q8N967 370 aa9.99□□□□□ -0.81
TCOF1-215ENST00000515516 RNF125Q96EQ8 232 aa9.99□□□□□ -0.81
TCOF1-215ENST00000515516 CIB3Q96Q77 187 aaPredicted RBP9.99□□□□□ -0.81
TCOF1-215ENST00000515516 RAB40CQ96S21 281 aa9.99□□□□□ -0.81
TCOF1-215ENST00000515516 NRN1Q9NPD7 142 aa9.99□□□□□ -0.81
TCOF1-215ENST00000515516 TMED3Q9Y3Q3 217 aa9.99□□□□□ -0.81
TCOF1-215ENST00000515516 SNRPGP15A8MWD9 76 aa9.98□□□□□ -0.81
TCOF1-215ENST00000515516 BUB3O43684 328 aa9.98□□□□□ -0.81
TCOF1-215ENST00000515516 PITX3O75364 302 aa9.98□□□□□ -0.81
TCOF1-215ENST00000515516 SFT2D2O95562 160 aa9.98□□□□□ -0.81
TCOF1-215ENST00000515516 NANOS2P60321 138 aaKnown RBP9.98□□□□□ -0.81
TCOF1-215ENST00000515516 NUTF2P61970 127 aaKnown RBP9.98□□□□□ -0.81
TCOF1-215ENST00000515516 ZNF79Q15937 498 aa9.98□□□□□ -0.81
TCOF1-215ENST00000515516 TRIQKQ629K1 86 aa9.98□□□□□ -0.81
TCOF1-215ENST00000515516 OR8G2PQ6IF36 304 aa9.98□□□□□ -0.81
TCOF1-215ENST00000515516 CCDC190Q86UF4 302 aa9.98□□□□□ -0.81
TCOF1-215ENST00000515516 PPP1R14BQ96C90 147 aa9.98□□□□□ -0.81
TCOF1-215ENST00000515516 SEPSECSQ9HD40 501 aaKnown RBP9.98□□□□□ -0.81
TCOF1-215ENST00000515516 ZNF701M0R085 212 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-215ENST00000515516 DEFB4AO15263 64 aa9.97□□□□□ -0.81
TCOF1-215ENST00000515516 HOXB5P09067 269 aa9.97□□□□□ -0.81
TCOF1-215ENST00000515516 UBE2MP61081 183 aaKnown RBP9.97□□□□□ -0.81
TCOF1-215ENST00000515516 LYZP61626 148 aa9.97□□□□□ -0.81
TCOF1-215ENST00000515516 PPP1R1AQ13522 171 aa9.97□□□□□ -0.81
TCOF1-215ENST00000515516 NAP1L6A6NFF2 107 aa9.96□□□□□ -0.82
TCOF1-215ENST00000515516 WRBO00258 174 aa9.96□□□□□ -0.82
TCOF1-215ENST00000515516 SYNGR2O43760 224 aa9.96□□□□□ -0.82
TCOF1-215ENST00000515516 MIFP14174 115 aa9.96□□□□□ -0.82
TCOF1-215ENST00000515516 ID1P41134 155 aa9.96□□□□□ -0.82
TCOF1-215ENST00000515516 ZNF90Q03938 601 aa9.96□□□□□ -0.82
TCOF1-215ENST00000515516 TRGV9Q99603 122 aa9.96□□□□□ -0.82
TCOF1-215ENST00000515516 C1QTNF4Q9BXJ3 329 aa9.96□□□□□ -0.82
TCOF1-215ENST00000515516 MAGT1Q9H0U3 335 aa9.96□□□□□ -0.82
TCOF1-215ENST00000515516 ALMS1Q8TCU4 4167 aa9.95□□□□□ -0.82
TCOF1-215ENST00000515516 CENPXA8MT69 81 aa9.95□□□□□ -0.82
TCOF1-215ENST00000515516 CFDP00746 253 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-215ENST00000515516 S100A7P31151 101 aa9.95□□□□□ -0.82
TCOF1-215ENST00000515516 OR2F1Q13607 317 aa9.95□□□□□ -0.82
TCOF1-215ENST00000515516 C1orf194Q5T5A4 169 aa9.95□□□□□ -0.82
TCOF1-215ENST00000515516 GGNBP1Q5YKI7 109 aa9.95□□□□□ -0.82
TCOF1-215ENST00000515516 COQ8AQ8NI60 647 aa9.95□□□□□ -0.82
TCOF1-215ENST00000515516 C2CD4CQ8TF44 421 aa9.95□□□□□ -0.82
TCOF1-215ENST00000515516 LINC00052Q96N35 136 aa9.95□□□□□ -0.82
TCOF1-215ENST00000515516 SRRQ9GZT4 340 aa9.95□□□□□ -0.82
TCOF1-215ENST00000515516 TBC1D24Q9ULP9 559 aa9.95□□□□□ -0.82
TCOF1-215ENST00000515516 IGKV1D-37A0A075B6S9 117 aa9.94□□□□□ -0.82
TCOF1-215ENST00000515516 IGHV4-28A0A0C4DH34 117 aa9.94□□□□□ -0.82
TCOF1-215ENST00000515516 C11orf94C9JXX5 98 aa9.94□□□□□ -0.82
TCOF1-215ENST00000515516 IFNA21P01568 189 aa9.94□□□□□ -0.82
TCOF1-215ENST00000515516 GIG44P09565 113 aaPredicted RBP9.94□□□□□ -0.82
TCOF1-215ENST00000515516 C4BPBP20851 252 aa9.94□□□□□ -0.82
TCOF1-215ENST00000515516 NKX2-1P43699 371 aaPredicted RBP9.94□□□□□ -0.82
TCOF1-215ENST00000515516 SPANXN5Q5MJ07 72 aa9.94□□□□□ -0.82
TCOF1-215ENST00000515516 OR8I2Q8N0Y5 310 aa9.94□□□□□ -0.82
TCOF1-215ENST00000515516 Q8NAQ8 132 aa9.94□□□□□ -0.82
TCOF1-215ENST00000515516 RBM38Q9H0Z9 239 aaKnown RBP9.94□□□□□ -0.82
TCOF1-215ENST00000515516 HRH4Q9H3N8 390 aa9.94□□□□□ -0.82
TCOF1-215ENST00000515516 CLEC5AQ9NY25 188 aa9.94□□□□□ -0.82
TCOF1-215ENST00000515516 STRAPQ9Y3F4 350 aaKnown RBP9.94□□□□□ -0.82
TCOF1-215ENST00000515516 LINC00854A0A1B0GVQ3 168 aa9.93□□□□□ -0.82
TCOF1-215ENST00000515516 C9orf170A2RU37 121 aa9.93□□□□□ -0.82
TCOF1-215ENST00000515516 ZNF705EA8MWA4 302 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-215ENST00000515516 H3BMM0 161 aa9.93□□□□□ -0.82
TCOF1-215ENST00000515516 SAMD13Q5VXD3 122 aa9.93□□□□□ -0.82
TCOF1-215ENST00000515516 THAP8Q8NA92 274 aa9.93□□□□□ -0.82
TCOF1-215ENST00000515516 NDUFB6O95139 128 aa9.92□□□□□ -0.82
TCOF1-215ENST00000515516 RBMY1A1P0DJD3 496 aaKnown RBP9.92□□□□□ -0.82
TCOF1-215ENST00000515516 RBMY1CP0DJD4 496 aa9.92□□□□□ -0.82
TCOF1-215ENST00000515516 HLA-DRB4P13762 266 aa9.92□□□□□ -0.82
TCOF1-215ENST00000515516 PSMB3P49720 205 aa9.92□□□□□ -0.82
TCOF1-215ENST00000515516 TCTAP57738 103 aa9.92□□□□□ -0.82
TCOF1-215ENST00000515516 AKR1C1Q04828 323 aa9.92□□□□□ -0.82
TCOF1-215ENST00000515516 RBMY1FQ15415 496 aaKnown RBP9.92□□□□□ -0.82
TCOF1-215ENST00000515516 BAK1Q16611 211 aa9.92□□□□□ -0.82
TCOF1-215ENST00000515516 LGALS9CQ6DKI2 356 aa9.92□□□□□ -0.82
TCOF1-215ENST00000515516 BPIFCQ8NFQ6 507 aa9.92□□□□□ -0.82
TCOF1-215ENST00000515516 XCL2Q9UBD3 114 aa9.92□□□□□ -0.82
TCOF1-215ENST00000515516 HLA-DRB4X5D2U9 266 aa9.92□□□□□ -0.82
TCOF1-215ENST00000515516 IGLL5B9A064 214 aa9.91□□□□□ -0.82
TCOF1-215ENST00000515516 H3BP45 60 aa9.91□□□□□ -0.82
TCOF1-215ENST00000515516 ADAP1O75689 374 aa9.91□□□□□ -0.82
TCOF1-215ENST00000515516 OR4E1P0C645 316 aa9.91□□□□□ -0.82
TCOF1-215ENST00000515516 GALR1P47211 349 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms