RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 HELTA6NFD8 242 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 DNASE2O00115 360 aaPredicted RBP9.48□□□□□ -0.89
CLCN3-210ENST00000515420 UBE2CO00762 179 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 UPK1BO75841 260 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 PSG1P11464 419 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 AP2S1P53680 142 aaPredicted RBP9.48□□□□□ -0.89
CLCN3-210ENST00000515420 TAS2R30P59541 319 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 USF2Q15853 346 aaPredicted RBP9.48□□□□□ -0.89
CLCN3-210ENST00000515420 IAH1Q2TAA2 248 aaPredicted RBP9.48□□□□□ -0.89
CLCN3-210ENST00000515420 THAP8Q8NA92 274 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 MUC7Q8TAX7 377 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 ZNF431Q8TF32 576 aaPredicted RBP9.48□□□□□ -0.89
CLCN3-210ENST00000515420 RNF125Q96EQ8 232 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 SMIM8Q96KF7 97 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 RAB40CQ96S21 281 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 MAP6D1Q9H9H5 199 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 EDA2RQ9HAV5 297 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 PFDN2Q9UHV9 154 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 RABAC1Q9UI14 185 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 TRAV6A0A075B6T7 132 aa9.47□□□□□ -0.89
CLCN3-210ENST00000515420 IGHV3-66A0A0C4DH42 116 aa9.47□□□□□ -0.89
CLCN3-210ENST00000515420 CFDP00746 253 aaPredicted RBP9.47□□□□□ -0.89
CLCN3-210ENST00000515420 H2AFB2P0C5Z0 115 aa9.47□□□□□ -0.89
CLCN3-210ENST00000515420 POLR2GP62487 172 aaKnown RBP eCLIP9.47□□□□□ -0.89
CLCN3-210ENST00000515420 RPL11P62913 178 aaKnown RBP9.47□□□□□ -0.89
CLCN3-210ENST00000515420 SPANXN5Q5MJ07 72 aa9.47□□□□□ -0.89
CLCN3-210ENST00000515420 C16orf54Q6UWD8 224 aa9.47□□□□□ -0.89
CLCN3-210ENST00000515420 Q6ZWC4 215 aa9.47□□□□□ -0.89
CLCN3-210ENST00000515420 ZBTB8BQ8NAP8 495 aaPredicted RBP9.47□□□□□ -0.89
CLCN3-210ENST00000515420 GLMPQ8WWB7 406 aa9.47□□□□□ -0.89
CLCN3-210ENST00000515420 PAIP2BQ9ULR5 123 aaKnown RBP9.47□□□□□ -0.89
CLCN3-210ENST00000515420 TP53TG1Q9Y2A0 90 aa9.47□□□□□ -0.89
CLCN3-210ENST00000515420 IGKV3-7A0A075B6H7 116 aa9.46□□□□□ -0.9
CLCN3-210ENST00000515420 IGKV1OR2-108A0A075B7D4 117 aa9.46□□□□□ -0.9
CLCN3-210ENST00000515420 SNRPGP15A8MWD9 76 aa9.46□□□□□ -0.9
CLCN3-210ENST00000515420 FNDC10F2Z333 226 aa9.46□□□□□ -0.9
CLCN3-210ENST00000515420 K7EQG2 157 aa9.46□□□□□ -0.9
CLCN3-210ENST00000515420 BUB3O43684 328 aa9.46□□□□□ -0.9
CLCN3-210ENST00000515420 SSSCA1O60232 199 aa9.46□□□□□ -0.9
CLCN3-210ENST00000515420 TSC22D2O75157 780 aa9.46□□□□□ -0.9
CLCN3-210ENST00000515420 TFPI2P48307 235 aa9.46□□□□□ -0.9
CLCN3-210ENST00000515420 GBGT1Q8N5D6 347 aa9.46□□□□□ -0.9
CLCN3-210ENST00000515420 DCANP1Q8TF63 244 aa9.46□□□□□ -0.9
CLCN3-210ENST00000515420 SEPSECSQ9HD40 501 aaKnown RBP9.46□□□□□ -0.9
CLCN3-210ENST00000515420 PSENENQ9NZ42 101 aa9.46□□□□□ -0.9
CLCN3-210ENST00000515420 H3BP45 60 aa9.45□□□□□ -0.9
CLCN3-210ENST00000515420 IL5P05113 134 aa9.45□□□□□ -0.9
CLCN3-210ENST00000515420 PAX9P55771 341 aa9.45□□□□□ -0.9
CLCN3-210ENST00000515420 ZNF90Q03938 601 aa9.45□□□□□ -0.9
CLCN3-210ENST00000515420 C1orf194Q5T5A4 169 aa9.45□□□□□ -0.9
CLCN3-210ENST00000515420 TMEM14EPQ6UXP3 125 aa9.45□□□□□ -0.9
CLCN3-210ENST00000515420 ACOT7LQ6ZUV0 252 aa9.45□□□□□ -0.9
CLCN3-210ENST00000515420 TMEM144Q7Z5S9 345 aa9.45□□□□□ -0.9
CLCN3-210ENST00000515420 WFDC3Q8IUB2 231 aa9.45□□□□□ -0.9
CLCN3-210ENST00000515420 C12orf45Q8N5I9 185 aaPredicted RBP9.45□□□□□ -0.9
CLCN3-210ENST00000515420 STPG3Q8N7X2 389 aa9.45□□□□□ -0.9
CLCN3-210ENST00000515420 STXBP6Q8NFX7 210 aa9.45□□□□□ -0.9
CLCN3-210ENST00000515420 RETNQ9HD89 108 aa9.45□□□□□ -0.9
CLCN3-210ENST00000515420 SLC45A2Q9UMX9 530 aa9.45□□□□□ -0.9
CLCN3-210ENST00000515420 RCL1Q9Y2P8 373 aaKnown RBP9.45□□□□□ -0.9
CLCN3-210ENST00000515420 PMS2P5A8MQ11 134 aa9.44□□□□□ -0.9
CLCN3-210ENST00000515420 SCGB1D2O95969 90 aa9.44□□□□□ -0.9
CLCN3-210ENST00000515420 MBPP02686 304 aaPredicted RBP9.44□□□□□ -0.9
CLCN3-210ENST00000515420 DLK1P80370 383 aa9.44□□□□□ -0.9
CLCN3-210ENST00000515420 AKR1C1Q04828 323 aa9.44□□□□□ -0.9
CLCN3-210ENST00000515420 SIGLEC15Q6ZMC9 328 aa9.44□□□□□ -0.9
CLCN3-210ENST00000515420 APRG1Q8IVJ8 170 aa9.44□□□□□ -0.9
CLCN3-210ENST00000515420 ENKURQ8TC29 256 aa9.44□□□□□ -0.9
CLCN3-210ENST00000515420 SEC22CQ9BRL7 303 aa9.44□□□□□ -0.9
CLCN3-210ENST00000515420 OVOL2Q9BRP0 275 aa9.44□□□□□ -0.9
CLCN3-210ENST00000515420 PBDC1Q9BVG4 233 aa9.44□□□□□ -0.9
CLCN3-210ENST00000515420 GSKIPQ9P0R6 139 aa9.44□□□□□ -0.9
CLCN3-210ENST00000515420 FBXL17Q9UF56 701 aa9.44□□□□□ -0.9
CLCN3-210ENST00000515420 LYL1P12980 280 aa9.43□□□□□ -0.9
CLCN3-210ENST00000515420 S100A7P31151 101 aa9.43□□□□□ -0.9
CLCN3-210ENST00000515420 DEFB131AP59861 70 aa9.43□□□□□ -0.9
CLCN3-210ENST00000515420 LYZP61626 148 aa9.43□□□□□ -0.9
CLCN3-210ENST00000515420 BPIFCQ8NFQ6 507 aa9.43□□□□□ -0.9
CLCN3-210ENST00000515420 OR10P1Q8NGE3 313 aa9.43□□□□□ -0.9
CLCN3-210ENST00000515420 IL17DQ8TAD2 202 aa9.43□□□□□ -0.9
CLCN3-210ENST00000515420 C2orf50Q96LR7 162 aa9.43□□□□□ -0.9
CLCN3-210ENST00000515420 GPN1Q9HCN4 374 aaPredicted RBP9.43□□□□□ -0.9
CLCN3-210ENST00000515420 NRN1Q9NPD7 142 aa9.43□□□□□ -0.9
CLCN3-210ENST00000515420 DNAH7Q8WXX0 4024 aa9.43□□□□□ -0.9
CLCN3-210ENST00000515420 C7orf66A4D0T2 115 aa9.42□□□□□ -0.9
CLCN3-210ENST00000515420 C5orf51A6NDU8 294 aa9.42□□□□□ -0.9
CLCN3-210ENST00000515420 CCSO14618 274 aa9.42□□□□□ -0.9
CLCN3-210ENST00000515420 PRAF2O60831 178 aa9.42□□□□□ -0.9
CLCN3-210ENST00000515420 DEFA1P59665 94 aa9.42□□□□□ -0.9
CLCN3-210ENST00000515420 DEFA3P59666 94 aa9.42□□□□□ -0.9
CLCN3-210ENST00000515420 SNRPD3P62318 126 aaKnown RBP9.42□□□□□ -0.9
CLCN3-210ENST00000515420 IFITM3Q01628 133 aa9.42□□□□□ -0.9
CLCN3-210ENST00000515420 CASC10Q5T4H9 136 aa9.42□□□□□ -0.9
CLCN3-210ENST00000515420 GSG1LQ6UXU4 331 aa9.42□□□□□ -0.9
CLCN3-210ENST00000515420 FAM24BQ8N5W8 94 aa9.42□□□□□ -0.9
CLCN3-210ENST00000515420 RNF183Q96D59 192 aa9.42□□□□□ -0.9
CLCN3-210ENST00000515420 GGACTQ9BVM4 153 aa9.42□□□□□ -0.9
CLCN3-210ENST00000515420 CSTL1Q9H114 145 aa9.42□□□□□ -0.9
CLCN3-210ENST00000515420 FAM25EA8MYX2 175 aa9.41□□□□□ -0.9
CLCN3-210ENST00000515420 K7EPK0 472 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms