RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 TMEM78Q5T7P6 136 aa10.83□□□□□ -0.68
TCOF1-213ENST00000514442 CYSLTR1Q9Y271 337 aa10.83□□□□□ -0.68
TCOF1-213ENST00000514442 SPANXN1Q5VSR9 72 aa10.83□□□□□ -0.68
TCOF1-213ENST00000514442 SRSF12Q8WXF0 261 aaKnown RBP10.83□□□□□ -0.68
TCOF1-213ENST00000514442 IGHV3-66A0A0C4DH42 116 aa10.83□□□□□ -0.68
TCOF1-213ENST00000514442 SAA1P0DJI8 122 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-213ENST00000514442 TTC9CQ8N5M4 171 aa10.83□□□□□ -0.68
TCOF1-213ENST00000514442 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-213ENST00000514442 CHTOPQ9Y3Y2 248 aaKnown RBP10.83□□□□□ -0.68
TCOF1-213ENST00000514442 A0A0G2JNJ9 132 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 RBX1P62877 108 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 LINC00305Q7Z4B0 112 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 IFI27L2Q9H2X8 130 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 Q9UFV3 132 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 TMEM189A5PLL7 270 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 PSPNO60542 156 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 SNCGO76070 127 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 HERVK_113P61574 105 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 NHP2Q9NX24 153 aaKnown RBP10.82□□□□□ -0.68
TCOF1-213ENST00000514442 METRNQ9UJH8 293 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 SLC25A15Q9Y619 301 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 ZNF407Q9C0G0 2248 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 H3BRM9 83 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 BVES-AS1Q5T3Y7 98 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 ZNF48Q96MX3 618 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-213ENST00000514442 MLNRO43193 412 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 MAP1LC3AQ9H492 121 aa10.82□□□□□ -0.68
TCOF1-213ENST00000514442 C9orf118A6NHY6 69 aa10.81□□□□□ -0.68
TCOF1-213ENST00000514442 APOMO95445 188 aa10.81□□□□□ -0.68
TCOF1-213ENST00000514442 RPL7P18124 248 aaKnown RBP10.81□□□□□ -0.68
TCOF1-213ENST00000514442 Q6ZRM9 215 aa10.81□□□□□ -0.68
TCOF1-213ENST00000514442 Q6ZS49 121 aa10.81□□□□□ -0.68
TCOF1-213ENST00000514442 C18orf32Q8TCD1 76 aa10.81□□□□□ -0.68
TCOF1-213ENST00000514442 FOXA2Q9Y261 457 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-213ENST00000514442 DIDO1Q9BTC0 2240 aaKnown RBP10.81□□□□□ -0.68
TCOF1-213ENST00000514442 SPTAN1Q13813 2472 aaKnown RBP10.81□□□□□ -0.68
TCOF1-213ENST00000514442 K7EP34 96 aa10.81□□□□□ -0.68
TCOF1-213ENST00000514442 YPEL1O60688 119 aa10.81□□□□□ -0.68
TCOF1-213ENST00000514442 RAB9AP51151 201 aa10.81□□□□□ -0.68
TCOF1-213ENST00000514442 PRSS8Q16651 343 aa10.81□□□□□ -0.68
TCOF1-213ENST00000514442 TREML4Q6UXN2 200 aa10.81□□□□□ -0.68
TCOF1-213ENST00000514442 TCF24Q7RTU0 167 aa10.81□□□□□ -0.68
TCOF1-213ENST00000514442 YPEL2Q96QA6 119 aa10.81□□□□□ -0.68
TCOF1-213ENST00000514442 SCRT1Q9BWW7 348 aa10.81□□□□□ -0.68
TCOF1-213ENST00000514442 GAGE13Q4V321 117 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 PRR30Q53SZ7 412 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-213ENST00000514442 TEX29Q8N6K0 151 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 OR10J6PQ8NGY7 276 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 C7orf69Q9H7B7 122 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 MPDZO75970 2070 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 ALPK3Q96L96 1907 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 TOMM40O96008 361 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 GUSBP1Q15486 140 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 GOLT1AQ6ZVE7 132 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 GGTLC1Q9BX51 225 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 F2Z2F3 143 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 TRGV3P03979 118 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 SCGB1A1P11684 91 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 MBNL2Q5VZF2 373 aaKnown RBP10.8□□□□□ -0.68
TCOF1-213ENST00000514442 ZNF418Q8TF45 676 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-213ENST00000514442 PROK2Q9HC23 129 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 PKDREJQ9NTG1 2253 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 THBDP07204 575 aa10.8□□□□□ -0.68
TCOF1-213ENST00000514442 MRPL16Q9NX20 251 aaKnown RBP10.8□□□□□ -0.68
TCOF1-213ENST00000514442 PLXND1Q9Y4D7 1925 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 A0A1B0GUT8 65 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 ADAMTSL5Q6ZMM2 481 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 Q6ZS92 163 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 PRELID3AQ96N28 172 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 SRRM5B3KS81 715 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 EEF1AKMT3Q96AZ1 226 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 ZNF479Q96JC4 524 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 TMEM133Q9H2Q1 129 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 TGFAP01135 160 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 ATP5IP56385 69 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-213ENST00000514442 SPATA31B1PQ5VZV4 182 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 EBLN2Q6P2I7 272 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 RPRMLQ8N4K4 120 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 CD177Q8N6Q3 437 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 CACNA1BQ00975 2339 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 HEATR5AQ86XA9 2040 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 IGHV3OR16-12A0A075B7B8 117 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 A0A1B0GW15 77 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 IGHG3P01860 377 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 OR9G9P0C7N8 305 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 AZU1P20160 251 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 ZNF474Q6S9Z5 364 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-213ENST00000514442 CENPVQ7Z7K6 275 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-213ENST00000514442 HAPLN4Q86UW8 402 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 ZNF114Q8NC26 417 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 FMC1Q96HJ9 113 aa10.79□□□□□ -0.68
TCOF1-213ENST00000514442 DGAT2L7PQ6IED9 249 aa10.78□□□□□ -0.68
TCOF1-213ENST00000514442 TTC28Q96AY4 2481 aa10.78□□□□□ -0.68
TCOF1-213ENST00000514442 AREGP15514 252 aa10.78□□□□□ -0.68
TCOF1-213ENST00000514442 GNLYP22749 145 aa10.78□□□□□ -0.68
TCOF1-213ENST00000514442 ERVK11-1P61568 191 aa10.78□□□□□ -0.68
TCOF1-213ENST00000514442 NUP35Q8NFH5 326 aa10.78□□□□□ -0.68
TCOF1-213ENST00000514442 HEATR1Q9H583 2144 aaKnown RBP10.78□□□□□ -0.68
TCOF1-213ENST00000514442 TRAV8-6A0A0B4J262 113 aa10.78□□□□□ -0.68
TCOF1-213ENST00000514442 FAM106AQ4KMX7 169 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms