RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 HIGD1AQ9Y241 93 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 MOB4Q9Y3A3 225 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 C9JCJ5 164 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 ATP6V0E1O15342 81 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 RD3LP0DJH9 198 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 LYZP61626 148 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 C16orf82Q7Z2V1 217 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 OR5T1Q8NG75 326 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 ANAPC16Q96DE5 110 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 TMEM68Q96MH6 324 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 BEX4Q9NWD9 120 aaPredicted RBP11.74□□□□□ -0.53
VCAN-211ENST00000513984 URGCP-MRPS24S4R325 110 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 CELSR2Q9HCU4 2923 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 SVEP1Q4LDE5 3571 aa11.73□□□□□ -0.53
VCAN-211ENST00000513984 F8W735 103 aaPredicted RBP11.73□□□□□ -0.53
VCAN-211ENST00000513984 CD99P14209 185 aa11.73□□□□□ -0.53
VCAN-211ENST00000513984 HIST1H1BP16401 226 aaKnown RBP11.73□□□□□ -0.53
VCAN-211ENST00000513984 COL8A1P27658 744 aa11.73□□□□□ -0.53
VCAN-211ENST00000513984 KRTAP10-9P60411 292 aa11.73□□□□□ -0.53
VCAN-211ENST00000513984 YPEL3P61236 119 aaPredicted RBP11.73□□□□□ -0.53
VCAN-211ENST00000513984 LINC01356Q8N9X3 169 aa11.73□□□□□ -0.53
VCAN-211ENST00000513984 C2CD4CQ8TF44 421 aa11.73□□□□□ -0.53
VCAN-211ENST00000513984 MRPL27Q9P0M9 148 aaKnown RBP11.73□□□□□ -0.53
VCAN-211ENST00000513984 LY96Q9Y6Y9 160 aa11.73□□□□□ -0.53
VCAN-211ENST00000513984 KMT2BQ9UMN6 2715 aaPredicted RBP11.73□□□□□ -0.53
VCAN-211ENST00000513984 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
VCAN-211ENST00000513984 GNG7O60262 68 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 NDUFB8O95169 186 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 CXCL1P09341 107 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 GP9P14770 177 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 CRYBB3P26998 211 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 FCGR2BP31994 310 aaPredicted RBP11.72□□□□□ -0.53
VCAN-211ENST00000513984 RPL35P42766 123 aaKnown RBP11.72□□□□□ -0.53
VCAN-211ENST00000513984 SUMO1P63165 101 aaKnown RBP11.72□□□□□ -0.53
VCAN-211ENST00000513984 UNQ5815/PRO19632Q6UWF5 114 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 C21orf62Q9NYP8 219 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 PTPN13Q12923 2485 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 CSMD1Q96PZ7 3565 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 C1orf196B1AJZ1 125 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 H7BYZ3 331 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 OR2J3O76001 311 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 AVPP01185 164 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 RAB5BP61020 215 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 TMEM219Q86XT9 240 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 LRRC75A-AS1Q8N1F1 130 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 ZNF491Q8N8L2 437 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 TMUB1Q9BVT8 246 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 ELOVL1Q9BW60 279 aa11.72□□□□□ -0.53
VCAN-211ENST00000513984 SLC25A39Q9BZJ4 359 aaPredicted RBP11.72□□□□□ -0.53
VCAN-211ENST00000513984 TGIF2-C20orf24A0A0A6YYL0 155 aa11.71□□□□□ -0.54
VCAN-211ENST00000513984 WI2-2373I1.2A0A1W2PRP0 233 aa11.71□□□□□ -0.54
VCAN-211ENST00000513984 PGPEP1LA6NFU8 196 aa11.71□□□□□ -0.54
VCAN-211ENST00000513984 AMY1AP04745 511 aa11.71□□□□□ -0.54
VCAN-211ENST00000513984 MYCNOSP40205 109 aa11.71□□□□□ -0.54
VCAN-211ENST00000513984 CRIP2P52943 208 aaPredicted RBP11.71□□□□□ -0.54
VCAN-211ENST00000513984 LOXL1Q08397 574 aaPredicted RBP11.71□□□□□ -0.54
VCAN-211ENST00000513984 ECSCRQ19T08 205 aa11.71□□□□□ -0.54
VCAN-211ENST00000513984 C1QL4Q86Z23 238 aa11.71□□□□□ -0.54
VCAN-211ENST00000513984 VN1R17PQ8TDU5 208 aa11.71□□□□□ -0.54
VCAN-211ENST00000513984 TXN2Q99757 166 aa11.71□□□□□ -0.54
VCAN-211ENST00000513984 TCEAL7Q9BRU2 100 aa11.71□□□□□ -0.54
VCAN-211ENST00000513984 S4R3C0 116 aa11.71□□□□□ -0.54
VCAN-211ENST00000513984 TRBV24-1A0A075B6N3 115 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 PFN1P07737 140 aaKnown RBP11.7□□□□□ -0.54
VCAN-211ENST00000513984 DEFB113Q30KQ7 82 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 Q56UQ5 140 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 ZNF329Q86UD4 541 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 OCC1Q8TAD7 63 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 RNF125Q96EQ8 232 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 TMEM14CQ9P0S9 112 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 FBXL7Q9UJT9 491 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 TRBV9A0A0B4J1U6 114 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 HELTA6NFD8 242 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 SH2D7A6NKC9 451 aaPredicted RBP11.7□□□□□ -0.54
VCAN-211ENST00000513984 LINC01548A6NM66 108 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 H3BRN7 92 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 J3QLI3 93 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 SHANK2-AS3Q9BTD1 123 aa11.7□□□□□ -0.54
VCAN-211ENST00000513984 AURKAIP1Q9NWT8 199 aaPredicted RBP11.7□□□□□ -0.54
VCAN-211ENST00000513984 SOX21Q9Y651 276 aaPredicted RBP11.7□□□□□ -0.54
VCAN-211ENST00000513984 CELSR1Q9NYQ6 3014 aa11.69□□□□□ -0.54
VCAN-211ENST00000513984 CSMD2Q7Z408 3487 aa11.69□□□□□ -0.54
VCAN-211ENST00000513984 A6NDX4 124 aa11.69□□□□□ -0.54
VCAN-211ENST00000513984 PPP1R2P9O14990 202 aa11.69□□□□□ -0.54
VCAN-211ENST00000513984 SCGB2A1O75556 95 aa11.69□□□□□ -0.54
VCAN-211ENST00000513984 IL4P05112 153 aa11.69□□□□□ -0.54
VCAN-211ENST00000513984 NBEAP1P0C6P0 100 aa11.69□□□□□ -0.54
VCAN-211ENST00000513984 C19orf54Q5BKX5 351 aa11.69□□□□□ -0.54
VCAN-211ENST00000513984 LEMD1Q68G75 181 aa11.69□□□□□ -0.54
VCAN-211ENST00000513984 ZFP82Q8N141 532 aa11.69□□□□□ -0.54
VCAN-211ENST00000513984 SFRP2Q96HF1 295 aa11.69□□□□□ -0.54
VCAN-211ENST00000513984 OR5B12Q96R08 314 aa11.69□□□□□ -0.54
VCAN-211ENST00000513984 POLQO75417 2590 aa11.69□□□□□ -0.54
VCAN-211ENST00000513984 MDFIC2A0A1B0GVS7 189 aa11.68□□□□□ -0.54
VCAN-211ENST00000513984 G3V318 75 aa11.68□□□□□ -0.54
VCAN-211ENST00000513984 H3BUX3 64 aa11.68□□□□□ -0.54
VCAN-211ENST00000513984 K7EN84 100 aa11.68□□□□□ -0.54
VCAN-211ENST00000513984 RPS10P46783 165 aaKnown RBP11.68□□□□□ -0.54
VCAN-211ENST00000513984 GALR1P47211 349 aa11.68□□□□□ -0.54
VCAN-211ENST00000513984 CENPWQ5EE01 88 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms