RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 C5orf64Q2M2E5 130 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 Q8N2B8 174 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 OR4S2Q8NH73 311 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 ORAOV1Q8WV07 137 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 PINX1Q96BK5 328 aaKnown RBP13.03□□□□□ -0.32
HMGCL-209ENST00000513148 MS4A10Q96PG2 267 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 HSPB9Q9BQS6 159 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 RBKSQ9H477 322 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 TPSG1Q9NRR2 321 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 A0A1W2PN81 502 aa13.02□□□□□ -0.33
HMGCL-209ENST00000513148 SRRM4A7MD48 611 aaKnown RBP13.02□□□□□ -0.33
HMGCL-209ENST00000513148 ESDP10768 282 aa13.02□□□□□ -0.33
HMGCL-209ENST00000513148 S100GP29377 79 aa13.02□□□□□ -0.33
HMGCL-209ENST00000513148 CHRNA7P36544 502 aa13.02□□□□□ -0.33
HMGCL-209ENST00000513148 COMPP49747 757 aaPredicted RBP13.02□□□□□ -0.33
HMGCL-209ENST00000513148 PSG5Q15238 335 aa13.02□□□□□ -0.33
HMGCL-209ENST00000513148 TMEM183BQ1AE95 376 aa13.02□□□□□ -0.33
HMGCL-209ENST00000513148 TMEM177Q53S58 311 aa13.02□□□□□ -0.33
HMGCL-209ENST00000513148 KCNIP4Q6PIL6 250 aa13.02□□□□□ -0.33
HMGCL-209ENST00000513148 IL22RA2Q969J5 263 aa13.02□□□□□ -0.33
HMGCL-209ENST00000513148 RNF5Q99942 180 aa13.02□□□□□ -0.33
HMGCL-209ENST00000513148 SERTAD4Q9NUC0 356 aa13.02□□□□□ -0.33
HMGCL-209ENST00000513148 C3orf85A0A1B0GTC6 90 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 A0A1B0GUS0 222 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 LINC01548A6NM66 108 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 MPPED1O15442 326 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 SELENOTP62341 195 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 AARDQ4LEZ3 155 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 TBC1D26Q86UD7 250 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 VKORC1L1Q8N0U8 176 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 LINC00527Q9UJ94 153 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 RFNGQ9Y644 331 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 STAB1Q9NY15 2570 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 IGLV2-23P01705 113 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 SLC25A6P12236 298 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 KIR2DS2P43631 304 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 PROK1P58294 105 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 KLHDC1Q8N7A1 406 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 C3orf56Q8N813 242 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 OSR1Q8TAX0 266 aaPredicted RBP13.01□□□□□ -0.33
HMGCL-209ENST00000513148 TMEM37Q8WXS4 190 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 SMIM7Q9BQ49 75 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 FUT9Q9Y231 359 aa13.01□□□□□ -0.33
HMGCL-209ENST00000513148 LGALS7P47929 136 aa13□□□□□ -0.33
HMGCL-209ENST00000513148 RPL23P62829 140 aaKnown RBP13□□□□□ -0.33
HMGCL-209ENST00000513148 OR2D3Q8NGH3 330 aa13□□□□□ -0.33
HMGCL-209ENST00000513148 ZFP92A6NM28 416 aa13□□□□□ -0.33
HMGCL-209ENST00000513148 FCN1O00602 326 aa13□□□□□ -0.33
HMGCL-209ENST00000513148 VDAC1P21796 283 aa13□□□□□ -0.33
HMGCL-209ENST00000513148 RPP30P78346 268 aaKnown RBP13□□□□□ -0.33
HMGCL-209ENST00000513148 OR5I1Q13606 314 aa13□□□□□ -0.33
HMGCL-209ENST00000513148 LEMD1Q68G75 181 aa13□□□□□ -0.33
HMGCL-209ENST00000513148 SSX7Q7RTT5 188 aa13□□□□□ -0.33
HMGCL-209ENST00000513148 WFDC12Q8WWY7 111 aa13□□□□□ -0.33
HMGCL-209ENST00000513148 RPRMQ9NS64 109 aa13□□□□□ -0.33
HMGCL-209ENST00000513148 S1PR2O95136 353 aa12.99□□□□□ -0.33
HMGCL-209ENST00000513148 IGHG2P01859 326 aa12.99□□□□□ -0.33
HMGCL-209ENST00000513148 HLA-DRB1P01911 266 aa12.99□□□□□ -0.33
HMGCL-209ENST00000513148 SAA1P0DJI8 122 aaPredicted RBP12.99□□□□□ -0.33
HMGCL-209ENST00000513148 F2RP25116 425 aa12.99□□□□□ -0.33
HMGCL-209ENST00000513148 ADIRFQ15847 76 aa12.99□□□□□ -0.33
HMGCL-209ENST00000513148 VMA21Q3ZAQ7 101 aa12.99□□□□□ -0.33
HMGCL-209ENST00000513148 DNAJC4Q9NNZ3 241 aa12.99□□□□□ -0.33
HMGCL-209ENST00000513148 IGHV7-81A0A0B4J1V7 117 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 C20orf202A1L168 122 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 SSSCA1O60232 199 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 CA2P00918 260 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 GNB1P62873 340 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 RUNX1Q01196 453 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 NMSQ5H8A3 153 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 HIST2H2BDQ6DRA6 164 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 ZNF695Q8IW36 515 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 SELENOHQ8IZQ5 122 aaKnown RBP12.98□□□□□ -0.33
HMGCL-209ENST00000513148 C11orf44Q8N8P7 122 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 SLC35E1Q96K37 410 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 TP53RKQ96S44 253 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 PXMP4Q9Y6I8 212 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 PLXNB1O43157 2135 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 ZNF705FA8MVS1 300 aaPredicted RBP12.98□□□□□ -0.33
HMGCL-209ENST00000513148 RBFOX2O43251 390 aaKnown RBP eCLIP12.98□□□□□ -0.33
HMGCL-209ENST00000513148 ZNF705DP0CH99 300 aaPredicted RBP12.98□□□□□ -0.33
HMGCL-209ENST00000513148 ZNF705BP0CI00 300 aaPredicted RBP12.98□□□□□ -0.33
HMGCL-209ENST00000513148 KRTAP10-3P60369 221 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 MEF2BQ02080 365 aaPredicted RBP12.98□□□□□ -0.33
HMGCL-209ENST00000513148 PPP1R27Q86WC6 154 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 SCGB1C1Q8TD33 95 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 RAB40CQ96S21 281 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 MAGT1Q9H0U3 335 aa12.98□□□□□ -0.33
HMGCL-209ENST00000513148 CEBPZOSA8MTT3 80 aa12.97□□□□□ -0.33
HMGCL-209ENST00000513148 TPPP2P59282 170 aa12.97□□□□□ -0.33
HMGCL-209ENST00000513148 NDPQ00604 133 aa12.97□□□□□ -0.33
HMGCL-209ENST00000513148 ATP6V0E1O15342 81 aa12.96□□□□□ -0.33
HMGCL-209ENST00000513148 CST7O76096 145 aa12.96□□□□□ -0.33
HMGCL-209ENST00000513148 TMEM50AO95807 157 aa12.96□□□□□ -0.33
HMGCL-209ENST00000513148 CRYGBP07316 175 aa12.96□□□□□ -0.33
HMGCL-209ENST00000513148 PAX9P55771 341 aa12.96□□□□□ -0.33
HMGCL-209ENST00000513148 CX3CL1P78423 397 aa12.96□□□□□ -0.33
HMGCL-209ENST00000513148 ZNF585BQ52M93 769 aa12.96□□□□□ -0.33
HMGCL-209ENST00000513148 TMEM41BQ5BJD5 291 aa12.96□□□□□ -0.33
HMGCL-209ENST00000513148 C10orf99Q6UWK7 81 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms