RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 ZNF320A2RRD8 509 aa11.73□□□□□ -0.53
SNCAIP-216ENST00000512146 CX3CL1P78423 397 aa11.73□□□□□ -0.53
SNCAIP-216ENST00000512146 HES1Q14469 280 aa11.73□□□□□ -0.53
SNCAIP-216ENST00000512146 ASPHD1Q5U4P2 390 aa11.73□□□□□ -0.53
SNCAIP-216ENST00000512146 GSX1Q9H4S2 264 aaPredicted RBP11.73□□□□□ -0.53
SNCAIP-216ENST00000512146 MRPL27Q9P0M9 148 aaKnown RBP11.73□□□□□ -0.53
SNCAIP-216ENST00000512146 PEX7O00628 323 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 TOX4O94842 621 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 PDLIM4P50479 330 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 YPEL3P61236 119 aaPredicted RBP11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 OR5I1Q13606 314 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 TTC9CQ8N5M4 171 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 ZNF48Q96MX3 618 aaPredicted RBP11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 GPR61Q9BZJ8 451 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 TMEM14CQ9P0S9 112 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 IGLV11-55A0A075B6I3 123 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 SLC17A3O00476 420 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 FABP1P07148 127 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 NBEAP1P0C6P0 100 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 ERVFC1-1P60608 527 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 TMEM183AQ8IXX5 376 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 ARPC1AQ92747 370 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 FANCD2OSQ96PS1 177 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 RASL11BQ9BPW5 248 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 HIGD1AQ9Y241 93 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 KLF12Q9Y4X4 402 aa11.72□□□□□ -0.53
SNCAIP-216ENST00000512146 IGHV4-39P01824 125 aa11.71□□□□□ -0.54
SNCAIP-216ENST00000512146 S100A2P29034 98 aa11.71□□□□□ -0.54
SNCAIP-216ENST00000512146 CNN1P51911 297 aaKnown RBP11.71□□□□□ -0.54
SNCAIP-216ENST00000512146 S100A12P80511 92 aa11.71□□□□□ -0.54
SNCAIP-216ENST00000512146 NDPQ00604 133 aa11.71□□□□□ -0.54
SNCAIP-216ENST00000512146 FAM103A1Q9BTL3 118 aaKnown RBP11.71□□□□□ -0.54
SNCAIP-216ENST00000512146 RD3LP0DJH9 198 aa11.7□□□□□ -0.54
SNCAIP-216ENST00000512146 TMEM190Q8WZ59 177 aa11.7□□□□□ -0.54
SNCAIP-216ENST00000512146 LINC00479Q96M42 142 aa11.7□□□□□ -0.54
SNCAIP-216ENST00000512146 SLC25A39Q9BZJ4 359 aaPredicted RBP11.7□□□□□ -0.54
SNCAIP-216ENST00000512146 EPDR1Q9UM22 224 aa11.7□□□□□ -0.54
SNCAIP-216ENST00000512146 CFAP46Q8IYW2 2715 aa11.7□□□□□ -0.54
SNCAIP-216ENST00000512146 FAM106CPP0CH98 169 aa11.7□□□□□ -0.54
SNCAIP-216ENST00000512146 TMEM11P17152 192 aa11.7□□□□□ -0.54
SNCAIP-216ENST00000512146 RANP62826 216 aaKnown RBP11.7□□□□□ -0.54
SNCAIP-216ENST00000512146 TMEM183BQ1AE95 376 aa11.7□□□□□ -0.54
SNCAIP-216ENST00000512146 RBM14Q96PK6 669 aaKnown RBP11.7□□□□□ -0.54
SNCAIP-216ENST00000512146 LPAR2Q9HBW0 351 aa11.7□□□□□ -0.54
SNCAIP-216ENST00000512146 TRAV30A0A087WSZ9 112 aa11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 TOMM40O96008 361 aa11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 EGR2P11161 476 aaPredicted RBP11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 LYZP61626 148 aa11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 RPEL1Q2QD12 228 aa11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 KLK9Q2XQG4 91 aa11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 ZNF600Q6ZNG1 722 aa11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 FAM231DQ6ZW35 169 aa11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 Q8N9W7 124 aa11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 SMIM12Q96EX1 92 aa11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 RNASE7Q9H1E1 156 aaKnown RBP11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 C1RLQ9NZP8 487 aa11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 KLK9Q9UKQ9 250 aa11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 TRAPPC1Q9Y5R8 145 aa11.69□□□□□ -0.54
SNCAIP-216ENST00000512146 ABCA1O95477 2261 aa11.68□□□□□ -0.54
SNCAIP-216ENST00000512146 IGHV7-81A0A0B4J1V7 117 aa11.68□□□□□ -0.54
SNCAIP-216ENST00000512146 XKRY2A2RUG3 117 aa11.68□□□□□ -0.54
SNCAIP-216ENST00000512146 PCP4L1A6NKN8 68 aa11.68□□□□□ -0.54
SNCAIP-216ENST00000512146 NCBP2LA6PVI3 153 aaKnown RBP11.68□□□□□ -0.54
SNCAIP-216ENST00000512146 HLA-DRB1P01911 266 aa11.68□□□□□ -0.54
SNCAIP-216ENST00000512146 KLF17Q5JT82 389 aaPredicted RBP11.68□□□□□ -0.54
SNCAIP-216ENST00000512146 C5orf17Q8NAS9 161 aa11.68□□□□□ -0.54
SNCAIP-216ENST00000512146 HIST1H2BLQ99880 126 aa11.68□□□□□ -0.54
SNCAIP-216ENST00000512146 SHANK2-AS3Q9BTD1 123 aa11.68□□□□□ -0.54
SNCAIP-216ENST00000512146 WI2-2373I1.2A0A1W2PRP0 233 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 PGPA6NDG6 321 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 F8W735 103 aaPredicted RBP11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 HIST1H1EP10412 219 aaKnown RBP11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 HIST1H1BP16401 226 aaKnown RBP11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 SAA4P35542 130 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 PYY3Q5JQD4 70 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 LEMD1Q68G75 181 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 BAGE2Q86Y30 109 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 ZNF491Q8N8L2 437 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 OR10D4PQ8NGN7 298 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 TMEM68Q96MH6 324 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 C7orf69Q9H7B7 122 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 NIT2Q9NQR4 276 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 SMIM27A0A1W2PRY6 76 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 H3BRN7 92 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 BRS3P32247 399 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 MFAP4P55083 255 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 PAX8Q06710 450 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 IBA57Q5T440 356 aaKnown RBP11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 BLNKQ8WV28 456 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 MBD6Q96DN6 1003 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 ATG101Q9BSB4 218 aa11.67□□□□□ -0.54
SNCAIP-216ENST00000512146 TRBV9A0A0B4J1U6 114 aa11.66□□□□□ -0.54
SNCAIP-216ENST00000512146 SLC25A5P05141 298 aaKnown RBP11.66□□□□□ -0.54
SNCAIP-216ENST00000512146 GNG5P63218 68 aa11.66□□□□□ -0.54
SNCAIP-216ENST00000512146 PDZD11Q5EBL8 140 aa11.66□□□□□ -0.54
SNCAIP-216ENST00000512146 DNLZQ5SXM8 178 aa11.66□□□□□ -0.54
SNCAIP-216ENST00000512146 FAM120AOSQ5T036 256 aa11.66□□□□□ -0.54
SNCAIP-216ENST00000512146 RNF125Q96EQ8 232 aa11.66□□□□□ -0.54
SNCAIP-216ENST00000512146 MLST8Q9BVC4 326 aa11.66□□□□□ -0.54
SNCAIP-216ENST00000512146 Q9H3A6 140 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms