RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 CLEC5AQ9NY25 188 aa11.11□□□□□ -0.63
COL1A1-213ENST00000511732 X6R8D5 127 aa11.11□□□□□ -0.63
COL1A1-213ENST00000511732 IGHV4-28A0A0C4DH34 117 aa11.1□□□□□ -0.63
COL1A1-213ENST00000511732 ZNF705EA8MWA4 302 aaPredicted RBP11.1□□□□□ -0.63
COL1A1-213ENST00000511732 FAM90A26D6RGX4 464 aa11.1□□□□□ -0.63
COL1A1-213ENST00000511732 IFNA4P05014 189 aa11.1□□□□□ -0.63
COL1A1-213ENST00000511732 EIF2B2P49770 351 aaKnown RBP11.1□□□□□ -0.63
COL1A1-213ENST00000511732 ZNF90Q03938 601 aa11.1□□□□□ -0.63
COL1A1-213ENST00000511732 GAMTQ14353 236 aa11.1□□□□□ -0.63
COL1A1-213ENST00000511732 PYDC2Q56P42 97 aa11.1□□□□□ -0.63
COL1A1-213ENST00000511732 SIGLEC15Q6ZMC9 328 aa11.1□□□□□ -0.63
COL1A1-213ENST00000511732 TOMM5Q8N4H5 51 aa11.1□□□□□ -0.63
COL1A1-213ENST00000511732 OR1S1Q8NH92 325 aa11.1□□□□□ -0.63
COL1A1-213ENST00000511732 RNF125Q96EQ8 232 aa11.1□□□□□ -0.63
COL1A1-213ENST00000511732 MFFQ9GZY8 342 aa11.1□□□□□ -0.63
COL1A1-213ENST00000511732 VPS13DQ5THJ4 4388 aa11.1□□□□□ -0.63
COL1A1-213ENST00000511732 FRAS1Q86XX4 4008 aa11.1□□□□□ -0.63
COL1A1-213ENST00000511732 DEDDO75618 318 aa11.09□□□□□ -0.63
COL1A1-213ENST00000511732 FAUP35544 74 aaKnown RBP11.09□□□□□ -0.63
COL1A1-213ENST00000511732 SRPXP78539 464 aa11.09□□□□□ -0.63
COL1A1-213ENST00000511732 TMEM41BQ5BJD5 291 aa11.09□□□□□ -0.63
COL1A1-213ENST00000511732 TMEM128Q5BJH2 165 aa11.09□□□□□ -0.63
COL1A1-213ENST00000511732 LGALS9CQ6DKI2 356 aa11.09□□□□□ -0.63
COL1A1-213ENST00000511732 GSG1LQ6UXU4 331 aa11.09□□□□□ -0.63
COL1A1-213ENST00000511732 NRN1Q9NPD7 142 aa11.09□□□□□ -0.63
COL1A1-213ENST00000511732 ELOA3CA0A087WX78 387 aaPredicted RBP11.08□□□□□ -0.64
COL1A1-213ENST00000511732 IAPPP10997 89 aa11.08□□□□□ -0.64
COL1A1-213ENST00000511732 GPX4P36969 197 aaPredicted RBP11.08□□□□□ -0.64
COL1A1-213ENST00000511732 LRTM2Q8N967 370 aa11.08□□□□□ -0.64
COL1A1-213ENST00000511732 PBDC1Q9BVG4 233 aa11.08□□□□□ -0.64
COL1A1-213ENST00000511732 DNAH10Q8IVF4 4471 aa11.08□□□□□ -0.64
COL1A1-213ENST00000511732 DUXBA0A1W2PPF3 345 aa11.07□□□□□ -0.64
COL1A1-213ENST00000511732 ZFP92A6NM28 416 aa11.07□□□□□ -0.64
COL1A1-213ENST00000511732 MIFP14174 115 aa11.07□□□□□ -0.64
COL1A1-213ENST00000511732 VAMP1P23763 118 aa11.07□□□□□ -0.64
COL1A1-213ENST00000511732 ATP5IP56385 69 aaPredicted RBP11.07□□□□□ -0.64
COL1A1-213ENST00000511732 AP3S2P59780 193 aa11.07□□□□□ -0.64
COL1A1-213ENST00000511732 DEFB1P60022 68 aa11.07□□□□□ -0.64
COL1A1-213ENST00000511732 PPP1R1AQ13522 171 aa11.07□□□□□ -0.64
COL1A1-213ENST00000511732 GDF5OSQ5U4N7 250 aa11.07□□□□□ -0.64
COL1A1-213ENST00000511732 CCDC190Q86UF4 302 aa11.07□□□□□ -0.64
COL1A1-213ENST00000511732 SEPSECSQ9HD40 501 aaKnown RBP11.07□□□□□ -0.64
COL1A1-213ENST00000511732 IGKV1OR2-108A0A075B7D4 117 aa11.06□□□□□ -0.64
COL1A1-213ENST00000511732 H3BMM0 161 aa11.06□□□□□ -0.64
COL1A1-213ENST00000511732 SFT2D2O95562 160 aa11.06□□□□□ -0.64
COL1A1-213ENST00000511732 SNRPD3P62318 126 aaKnown RBP11.06□□□□□ -0.64
COL1A1-213ENST00000511732 PRR20EP86478 221 aa11.06□□□□□ -0.64
COL1A1-213ENST00000511732 PRR20CP86479 221 aa11.06□□□□□ -0.64
COL1A1-213ENST00000511732 PRR20DP86480 221 aa11.06□□□□□ -0.64
COL1A1-213ENST00000511732 PRR20BP86481 221 aa11.06□□□□□ -0.64
COL1A1-213ENST00000511732 PRR20AP86496 221 aa11.06□□□□□ -0.64
COL1A1-213ENST00000511732 C2CD4CQ8TF44 421 aa11.06□□□□□ -0.64
COL1A1-213ENST00000511732 SLC35E1Q96K37 410 aa11.06□□□□□ -0.64
COL1A1-213ENST00000511732 SLC25A21Q9BQT8 299 aaPredicted RBP11.06□□□□□ -0.64
COL1A1-213ENST00000511732 WDR12Q9GZL7 423 aaKnown RBP11.06□□□□□ -0.64
COL1A1-213ENST00000511732 RBM38Q9H0Z9 239 aaKnown RBP11.06□□□□□ -0.64
COL1A1-213ENST00000511732 HRH4Q9H3N8 390 aa11.06□□□□□ -0.64
COL1A1-213ENST00000511732 TBC1D24Q9ULP9 559 aa11.06□□□□□ -0.64
COL1A1-213ENST00000511732 CCDC160A6NGH7 325 aa11.05□□□□□ -0.64
COL1A1-213ENST00000511732 PRSS46E5RG02 174 aa11.05□□□□□ -0.64
COL1A1-213ENST00000511732 SLC25A6P12236 298 aa11.05□□□□□ -0.64
COL1A1-213ENST00000511732 HLA-DMBP28068 263 aa11.05□□□□□ -0.64
COL1A1-213ENST00000511732 LYZP61626 148 aa11.05□□□□□ -0.64
COL1A1-213ENST00000511732 OR2F1Q13607 317 aa11.05□□□□□ -0.64
COL1A1-213ENST00000511732 OR8G2PQ6IF36 304 aa11.05□□□□□ -0.64
COL1A1-213ENST00000511732 MAGT1Q9H0U3 335 aa11.05□□□□□ -0.64
COL1A1-213ENST00000511732 XCL2Q9UBD3 114 aa11.05□□□□□ -0.64
COL1A1-213ENST00000511732 APLNQ9ULZ1 77 aa11.05□□□□□ -0.64
COL1A1-213ENST00000511732 TMED3Q9Y3Q3 217 aa11.05□□□□□ -0.64
COL1A1-213ENST00000511732 SOCS3O14543 225 aa11.04□□□□□ -0.64
COL1A1-213ENST00000511732 HOXB5P09067 269 aa11.04□□□□□ -0.64
COL1A1-213ENST00000511732 HLA-DRB4P13762 266 aa11.04□□□□□ -0.64
COL1A1-213ENST00000511732 S100A5P33763 92 aa11.04□□□□□ -0.64
COL1A1-213ENST00000511732 RAB11AP62491 216 aa11.04□□□□□ -0.64
COL1A1-213ENST00000511732 Q6ZTC4 211 aa11.04□□□□□ -0.64
COL1A1-213ENST00000511732 THAP8Q8NA92 274 aa11.04□□□□□ -0.64
COL1A1-213ENST00000511732 TRGV9Q99603 122 aa11.04□□□□□ -0.64
COL1A1-213ENST00000511732 PAIP2BQ9ULR5 123 aaKnown RBP11.04□□□□□ -0.64
COL1A1-213ENST00000511732 CELA1Q9UNI1 258 aa11.04□□□□□ -0.64
COL1A1-213ENST00000511732 HLA-DRB4X5D2U9 266 aa11.04□□□□□ -0.64
COL1A1-213ENST00000511732 PIGBOS1A0A0B4J2F0 54 aa11.03□□□□□ -0.64
COL1A1-213ENST00000511732 SNRPGP15A8MWD9 76 aa11.03□□□□□ -0.64
COL1A1-213ENST00000511732 IGLL5B9A064 214 aa11.03□□□□□ -0.64
COL1A1-213ENST00000511732 C11orf94C9JXX5 98 aa11.03□□□□□ -0.64
COL1A1-213ENST00000511732 WRBO00258 174 aa11.03□□□□□ -0.64
COL1A1-213ENST00000511732 SYNGR2O43760 224 aa11.03□□□□□ -0.64
COL1A1-213ENST00000511732 NKX2-1P43699 371 aaPredicted RBP11.03□□□□□ -0.64
COL1A1-213ENST00000511732 GGNBP1Q5YKI7 109 aa11.03□□□□□ -0.64
COL1A1-213ENST00000511732 TMEM182Q6ZP80 229 aaPredicted RBP11.03□□□□□ -0.64
COL1A1-213ENST00000511732 CENPSQ8N2Z9 138 aa11.03□□□□□ -0.64
COL1A1-213ENST00000511732 DEDD2Q8WXF8 326 aa11.03□□□□□ -0.64
COL1A1-213ENST00000511732 SRRQ9GZT4 340 aa11.03□□□□□ -0.64
COL1A1-213ENST00000511732 MED6O75586 246 aa11.02□□□□□ -0.65
COL1A1-213ENST00000511732 NUP62P37198 522 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-213ENST00000511732 BAK1Q16611 211 aa11.02□□□□□ -0.65
COL1A1-213ENST00000511732 ZNF767PQ75MW2 155 aa11.02□□□□□ -0.65
COL1A1-213ENST00000511732 C17orf77Q96MU5 243 aa11.02□□□□□ -0.65
COL1A1-213ENST00000511732 LINC00052Q96N35 136 aa11.02□□□□□ -0.65
COL1A1-213ENST00000511732 SAV1Q9H4B6 383 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-213ENST00000511732 ADAP1O75689 374 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms