RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 REEP5Q00765 189 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 DEFB113Q30KQ7 82 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 C3orf56Q8N813 242 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 SLC30A7Q8NEW0 376 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 TEX47Q8TBZ9 253 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 SLAMF6Q96DU3 332 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 ADAT3Q96EY9 351 aaPredicted RBP0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 PRAP1Q96NZ9 151 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 TLNRD1Q9H1K6 362 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 BCL2L10Q9HD36 194 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 ENY2Q9NPA8 101 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 ARL2BPQ9Y2Y0 163 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 TAF1LQ8IZX4 1826 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 TNRC6BQ9UPQ9 1833 aaKnown RBP0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 CEP192Q8TEP8 1941 aa0.85□□□□□ -2.27
TRAPPC11-207ENST00000511409 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.85□□□□□ -2.27
TRAPPC11-207ENST00000511409 GADD45GO95257 159 aa0.85□□□□□ -2.27
TRAPPC11-207ENST00000511409 PIGPP57054 158 aa0.85□□□□□ -2.27
TRAPPC11-207ENST00000511409 CNBPP62633 177 aaKnown RBP0.85□□□□□ -2.27
TRAPPC11-207ENST00000511409 FADDQ13158 208 aa0.85□□□□□ -2.27
TRAPPC11-207ENST00000511409 AKIRIN2Q53H80 203 aa0.85□□□□□ -2.27
TRAPPC11-207ENST00000511409 C1orf137Q5JT78 98 aa0.85□□□□□ -2.27
TRAPPC11-207ENST00000511409 C4orf3Q8WVX3 66 aa0.85□□□□□ -2.27
TRAPPC11-207ENST00000511409 ITFG2Q969R8 447 aa0.85□□□□□ -2.27
TRAPPC11-207ENST00000511409 DGCR14Q96DF8 476 aaKnown RBP0.85□□□□□ -2.27
TRAPPC11-207ENST00000511409 PRADC1Q9BSG0 188 aa0.85□□□□□ -2.27
TRAPPC11-207ENST00000511409 CDC42SE1Q9NRR8 79 aa0.85□□□□□ -2.27
TRAPPC11-207ENST00000511409 HMGB3O15347 200 aaKnown RBP0.84□□□□□ -2.27
TRAPPC11-207ENST00000511409 CST8O60676 142 aa0.84□□□□□ -2.27
TRAPPC11-207ENST00000511409 IFNA6P05013 189 aa0.84□□□□□ -2.27
TRAPPC11-207ENST00000511409 DYNLT1P63172 113 aa0.84□□□□□ -2.27
TRAPPC11-207ENST00000511409 KRR1Q13601 381 aaKnown RBP0.84□□□□□ -2.27
TRAPPC11-207ENST00000511409 GDF5OSQ5U4N7 250 aa0.84□□□□□ -2.27
TRAPPC11-207ENST00000511409 LINC00526Q96FQ7 95 aa0.84□□□□□ -2.27
TRAPPC11-207ENST00000511409 PHB2Q99623 299 aa0.84□□□□□ -2.27
TRAPPC11-207ENST00000511409 RNF122Q9H9V4 155 aa0.84□□□□□ -2.27
TRAPPC11-207ENST00000511409 C14orf132Q9NPU4 83 aa0.84□□□□□ -2.27
TRAPPC11-207ENST00000511409 DENND4CQ5VZ89 1909 aa0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 SCN3AQ9NY46 2000 aa0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 ZNF736B4DX44 427 aaPredicted RBP0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 TIMM17BO60830 172 aa0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 SERPINA1P01009 418 aa0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 CTXN2P0C2S0 81 aa0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 ERVS71-1P61550 626 aa0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 MRPS25P82663 173 aaKnown RBP0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 PRB3Q04118 309 aaPredicted RBP0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 OR11H6Q8NGC7 330 aa0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 OR2T35Q8NGX2 323 aa0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 TMEM254Q8TBM7 123 aa0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 C9orf16Q9BUW7 83 aa0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 OPTCQ9UBM4 332 aa0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 SBF1O95248 1867 aa0.83□□□□□ -2.28
TRAPPC11-207ENST00000511409 KIF1BO60333 1816 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 FMN1Q68DA7 1419 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 TRGV10A0A0A0MS01 117 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 TRAV4A0A0B4J268 109 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 FAM159BA6NKW6 160 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 DNAL4O96015 105 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 ZNF25P17030 456 aaPredicted RBP0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 ATP5G3P48201 142 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 MPV17LQ2QL34 196 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 FAM74A1Q5RGS3 127 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 BCL2L15Q5TBC7 163 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 SOSTDC1Q6X4U4 206 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 S100A7AQ86SG5 101 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 OR10X1Q8NGY0 326 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 STAG3L4Q8TBR4 150 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 BORCS5Q969J3 196 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 YPEL2Q96QA6 119 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 TMEM133Q9H2Q1 129 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 RIMBP3CA6NJZ7 1639 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 RIMBP3BA6NNM3 1639 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 RIMBP3Q9UFD9 1639 aa0.82□□□□□ -2.28
TRAPPC11-207ENST00000511409 DOCK3Q8IZD9 2030 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 TRBV19A0A075B6N1 114 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 TMEM210A6NLX4 147 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 M0R2N4 97 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 INE1O15225 51 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 NDUFB3O43676 98 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 IFNA7P01567 189 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 CST2P09228 141 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 RNASE4P34096 147 aaKnown RBP0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 TMED2Q15363 201 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 RRN3P1Q2M238 152 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 GOLT1AQ6ZVE7 132 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 PDZD9Q8IXQ8 264 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 ST6GALNAC3Q8NDV1 305 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 CHMP6Q96FZ7 201 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 IMUPQ9GZP8 106 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 PARVBQ9HBI1 364 aa0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 TNRC6AQ8NDV7 1962 aaKnown RBP0.81□□□□□ -2.28
TRAPPC11-207ENST00000511409 OBSL1O75147 1896 aa0.8□□□□□ -2.28
TRAPPC11-207ENST00000511409 ATP5HO75947 161 aa0.8□□□□□ -2.28
TRAPPC11-207ENST00000511409 DHFRP00374 187 aa0.8□□□□□ -2.28
TRAPPC11-207ENST00000511409 TAF1AQ15573 450 aaPredicted RBP0.8□□□□□ -2.28
TRAPPC11-207ENST00000511409 Q8IYB0 196 aa0.8□□□□□ -2.28
TRAPPC11-207ENST00000511409 CEP19Q96LK0 163 aa0.8□□□□□ -2.28
TRAPPC11-207ENST00000511409 GPER1Q99527 375 aa0.8□□□□□ -2.28
TRAPPC11-207ENST00000511409 SLC25A21Q9BQT8 299 aaPredicted RBP0.8□□□□□ -2.28
TRAPPC11-207ENST00000511409 MYH7BA7E2Y1 1941 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms