RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 SPCS3P61009 180 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 TMEM187Q14656 261 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 ZNF600Q6ZNG1 722 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 OR52E5Q8NH55 327 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 OVOL2Q9BRP0 275 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 SCP2D1Q9UJQ7 156 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 TMEM56-RWDD3S4R434 201 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 IGHV3-66A0A0C4DH42 116 aa6.35□□□□□ -1.39
PDPN-209ENST00000510906 CLN5O75503 358 aa6.35□□□□□ -1.39
PDPN-209ENST00000510906 AKR1C4P17516 323 aa6.35□□□□□ -1.39
PDPN-209ENST00000510906 RPL35AP18077 110 aaKnown RBP6.35□□□□□ -1.39
PDPN-209ENST00000510906 SUPT4H1P63272 117 aaKnown RBP6.35□□□□□ -1.39
PDPN-209ENST00000510906 KLF9Q13886 244 aaPredicted RBP6.35□□□□□ -1.39
PDPN-209ENST00000510906 TCF24Q7RTU0 167 aa6.35□□□□□ -1.39
PDPN-209ENST00000510906 APRG1Q8IVJ8 170 aa6.35□□□□□ -1.39
PDPN-209ENST00000510906 GBGT1Q8N5D6 347 aa6.35□□□□□ -1.39
PDPN-209ENST00000510906 OR4X1Q8NH49 305 aa6.35□□□□□ -1.39
PDPN-209ENST00000510906 TMEM170AQ8WVE7 144 aa6.35□□□□□ -1.39
PDPN-209ENST00000510906 GALNT14Q96FL9 552 aa6.35□□□□□ -1.39
PDPN-209ENST00000510906 GINS3Q9BRX5 216 aa6.35□□□□□ -1.39
PDPN-209ENST00000510906 V9GYH0 126 aa6.35□□□□□ -1.39
PDPN-209ENST00000510906 HECTD4Q9Y4D8 3996 aa6.35□□□□□ -1.39
PDPN-209ENST00000510906 LCE6AA0A183 80 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 CEBPZOSA8MTT3 80 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 DFFBO76075 338 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 IGKV1-17P01599 117 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 SULT1A3P0DMM9 295 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 SULT1A4P0DMN0 295 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 HTR2BP41595 481 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 APOC4P55056 127 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 ZNF79Q15937 498 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 DEFB135Q30KP9 77 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 TIGITQ495A1 244 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 C2orf83Q53S99 150 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 PYDC2Q56P42 97 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 NMSQ5H8A3 153 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 LYZL2Q7Z4W2 148 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 SLC24A4Q8NFF2 622 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 IL22RA2Q969J5 263 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 RNF125Q96EQ8 232 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 SCGB3A2Q96PL1 93 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 VSIRQ9H7M9 311 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 KCNIP3Q9Y2W7 256 aa6.34□□□□□ -1.39
PDPN-209ENST00000510906 A0A0B4J2A0 478 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 KIR2DL5BA0A0G2JN68 375 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 KIR2DL5BA0A0G2JPC4 375 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 IGLC1P0CG04 106 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 NPY1RP25929 384 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 BMI1P35226 326 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 FAUP35544 74 aaKnown RBP6.33□□□□□ -1.4
PDPN-209ENST00000510906 RND2P52198 227 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 KRTAP10-2P60368 255 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 PRSS54Q6PEW0 395 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 TMED4Q7Z7H5 227 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 CCDC190Q86UF4 302 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 KIR2DL5AQ8N109 375 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 TOMM5Q8N4H5 51 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 KIR2DL5BQ8NHK3 375 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 KRTAP9-2Q9BYQ4 174 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 MS4A6AQ9H2W1 248 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 MAP6D1Q9H9H5 199 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 SHPKQ9UHJ6 478 aa6.33□□□□□ -1.4
PDPN-209ENST00000510906 A0A0J9YWU9 116 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 RPS10-NUDT3A0A1W2PQS6 291 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 UBE2CO00762 179 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 NPPCP23582 126 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 CRYBB3P26998 211 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 S100A5P33763 92 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 CCR6P51684 374 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 AP3S2P59780 193 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 PAFAH1B2P68402 229 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 EWSR1Q01844 656 aaKnown RBP eCLIP6.32□□□□□ -1.4
PDPN-209ENST00000510906 TNFRSF9Q07011 255 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 SMCO1Q147U7 214 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 LINC00299Q6ZSB3 139 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 LGI3Q8N145 548 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 FAM24BQ8N5W8 94 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 RNASEH2CQ8TDP1 164 aaKnown RBP6.32□□□□□ -1.4
PDPN-209ENST00000510906 RNF183Q96D59 192 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 DAZAP1Q96EP5 407 aaKnown RBP6.32□□□□□ -1.4
PDPN-209ENST00000510906 ACY3Q96HD9 319 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 METTL26Q96S19 204 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 RBKSQ9H477 322 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 TMEM231Q9H6L2 316 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 HSPB7Q9UBY9 170 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 TP53TG1Q9Y2A0 90 aa6.32□□□□□ -1.4
PDPN-209ENST00000510906 PLECQ15149 4684 aaKnown RBP6.31□□□□□ -1.4
PDPN-209ENST00000510906 TRAV30A0A087WSZ9 112 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 DNASE2O00115 360 aaPredicted RBP6.31□□□□□ -1.4
PDPN-209ENST00000510906 SCGB2A1O75556 95 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 IFNA10P01566 189 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 CD5P06127 495 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 SLC25A4P12235 298 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 ANXA3P12429 323 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 OR10J1P30954 320 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 P2RY1P47900 373 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 CMC4P56277 68 aaPredicted RBP6.31□□□□□ -1.4
PDPN-209ENST00000510906 DEFB131AP59861 70 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 SRPXP78539 464 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 RBMS2Q15434 407 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms