RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 COA6Q5JTJ3 125 aaKnown RBP2.49□□□□□ -2.01
NUP54-209ENST00000510569 NXNL2Q5VZ03 156 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 NCBP2-AS2Q69YL0 99 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 HRCT1Q6UXD1 115 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 FBXW12Q6X9E4 464 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 Q6ZS49 121 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 ZNF767PQ75MW2 155 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 ZNF664Q8N3J9 261 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 LMX1AQ8TE12 382 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 MS4A6EQ96DS6 147 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 GNPNAT1Q96EK6 184 aaPredicted RBP2.49□□□□□ -2.01
NUP54-209ENST00000510569 DERL3Q96Q80 235 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 MGLLQ99685 303 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 ANAPC13Q9BS18 74 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 OR2J1Q9GZK6 312 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 AIG1Q9NVV5 245 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 TVP23BQ9NYZ1 205 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 SCP2D1Q9UJQ7 156 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 LTBP2Q14767 1821 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 MIA3Q5JRA6 1907 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 KMT2EQ8IZD2 1858 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 ZNF106Q9H2Y7 1883 aaKnown RBP2.48□□□□□ -2.01
NUP54-209ENST00000510569 IGKV1-27A0A075B6S5 117 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 A0A0G2JND7 137 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 TCRBV3S1A0A5B6 114 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 LINC00862A6NCI5 91 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 A8MWP6 167 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 H7BYZ3 331 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 GSTZ1O43708 216 aaPredicted RBP2.48□□□□□ -2.01
NUP54-209ENST00000510569 ZNF780AO75290 641 aaPredicted RBP2.48□□□□□ -2.01
NUP54-209ENST00000510569 IGLV3-25P01717 112 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 GPX1P07203 203 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 SMIM10L2AP0DMW4 78 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 SMIM10L2BP0DMW5 78 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 ATP6V0CP27449 155 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 INPP1P49441 399 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 AQP4P55087 323 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 COPZ1P61923 177 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 RPS11P62280 158 aaKnown RBP eCLIP2.48□□□□□ -2.01
NUP54-209ENST00000510569 HERVK_113P63121 156 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 SLC38A11Q08AI6 406 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 ADIGQ0VDE8 80 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 TCEAL5Q5H9L2 206 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 COL5A1-AS1Q5SY13 56 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 NCMAPQ5T1S8 102 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 KPRPQ5T749 579 aaPredicted RBP2.48□□□□□ -2.01
NUP54-209ENST00000510569 Q5XG85 94 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 AMMECR1LQ6DCA0 310 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 Q6Q795 121 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 GLIPR1L1Q6UWM5 242 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 IZUMO2Q6UXV1 221 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 SHISA6Q6ZSJ9 500 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 FAM19A3Q7Z5A8 133 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 ARPINQ7Z6K5 226 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 LHFPL1Q86WI0 220 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 SNX29P2Q8IUI4 249 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 ZNF695Q8IW36 515 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 TMEM75Q8N9X5 138 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 OR11G2Q8NGC1 345 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 NAT14Q8WUY8 206 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 RTN4IP1Q8WWV3 396 aaPredicted RBP2.48□□□□□ -2.01
NUP54-209ENST00000510569 YPEL4Q96NS1 127 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 OR2A5Q96R48 311 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 SLC25A21Q9BQT8 299 aaPredicted RBP2.48□□□□□ -2.01
NUP54-209ENST00000510569 TMEM243Q9BU79 118 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 SNRNP25Q9BV90 132 aaKnown RBP2.48□□□□□ -2.01
NUP54-209ENST00000510569 SNHG12Q9BXW3 62 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 IMUPQ9GZP8 106 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 PARP12Q9H0J9 701 aaKnown RBP2.48□□□□□ -2.01
NUP54-209ENST00000510569 MED28Q9H204 178 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 TAAR3PQ9P1P4 343 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 NUFIP1Q9UHK0 495 aaKnown RBP2.48□□□□□ -2.01
NUP54-209ENST00000510569 RPUSD1Q9UJJ7 312 aaKnown RBP2.48□□□□□ -2.01
NUP54-209ENST00000510569 BOKQ9UMX3 212 aaPredicted RBP2.48□□□□□ -2.01
NUP54-209ENST00000510569 AMMECR1Q9Y4X0 333 aaPredicted RBP2.48□□□□□ -2.01
NUP54-209ENST00000510569 ZFC3H1O60293 1989 aaKnown RBP2.48□□□□□ -2.01
NUP54-209ENST00000510569 SCN8AQ9UQD0 1980 aa2.48□□□□□ -2.01
NUP54-209ENST00000510569 CENPFP49454 3210 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 COL4A6Q14031 1691 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 MEIS3P1A6NDR6 274 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 ARRDC5A6NEK1 342 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 TMEM212A6NML5 194 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 KRBOX1C9JBD0 128 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 LY6LH3BQJ8 138 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 J3QQQ9 107 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 M0R381 172 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 FXYD1O00168 92 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 PEX7O00628 323 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 FSTL3O95633 263 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 SCGB1C2P0DMR2 95 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 CXCL8P10145 99 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 IL3RAP26951 378 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 IMPA1P29218 277 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 RAB5CP51148 216 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 RHOGP84095 191 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 EIF3IQ13347 325 aaKnown RBP2.47□□□□□ -2.01
NUP54-209ENST00000510569 CCSMST1Q4G0I0 132 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 SPANXN3Q5MJ09 141 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 LYRM7Q5U5X0 104 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 ZNF773Q6PK81 442 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms