RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 F11RQ9Y624 299 aaKnown RBP12.16□□□□□ -0.46
USP38-202ENST00000510377 WNT2P09544 360 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 TMPRSS3P57727 454 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 FBLN7Q53RD9 439 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 C12orf54Q6X4T0 127 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 S100A7AQ86SG5 101 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.16□□□□□ -0.46
USP38-202ENST00000510377 SZT2Q5T011 3432 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 TM4SF20Q53R12 229 aa12.15□□□□□ -0.46
USP38-202ENST00000510377 NAA38Q9BRA0 125 aaKnown RBP12.15□□□□□ -0.46
USP38-202ENST00000510377 HILPDAQ9Y5L2 63 aa12.15□□□□□ -0.46
USP38-202ENST00000510377 APOHP02749 345 aaPredicted RBP12.15□□□□□ -0.46
USP38-202ENST00000510377 ORM1P02763 201 aa12.15□□□□□ -0.46
USP38-202ENST00000510377 COMPP49747 757 aaPredicted RBP12.15□□□□□ -0.46
USP38-202ENST00000510377 ARF6P62330 175 aa12.15□□□□□ -0.46
USP38-202ENST00000510377 Q8TCH9 128 aa12.15□□□□□ -0.46
USP38-202ENST00000510377 AP5S1Q9NUS5 200 aa12.15□□□□□ -0.46
USP38-202ENST00000510377 IGHV3OR16-8A0A075B7F1 116 aa12.15□□□□□ -0.46
USP38-202ENST00000510377 GAGE10A6NGK3 116 aa12.15□□□□□ -0.46
USP38-202ENST00000510377 FCGR2BP31994 310 aaPredicted RBP12.15□□□□□ -0.46
USP38-202ENST00000510377 VWC2Q2TAL6 325 aa12.15□□□□□ -0.46
USP38-202ENST00000510377 SMIM15Q7Z3B0 74 aa12.15□□□□□ -0.46
USP38-202ENST00000510377 CACNG8Q8WXS5 425 aa12.15□□□□□ -0.46
USP38-202ENST00000510377 Q9H3A6 140 aa12.15□□□□□ -0.46
USP38-202ENST00000510377 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.14□□□□□ -0.472e-18■■■■■ 68.3
USP38-202ENST00000510377 OR2J3O76001 311 aa12.14□□□□□ -0.47
USP38-202ENST00000510377 WISP2O76076 250 aa12.14□□□□□ -0.47
USP38-202ENST00000510377 IGKV3-15P01624 115 aa12.14□□□□□ -0.47
USP38-202ENST00000510377 LINC00614P0C842 121 aa12.14□□□□□ -0.47
USP38-202ENST00000510377 SPRNQ5BIV9 151 aa12.14□□□□□ -0.47
USP38-202ENST00000510377 RPUSD1Q9UJJ7 312 aaKnown RBP12.14□□□□□ -0.47
USP38-202ENST00000510377 C16orf97H3BN30 126 aa12.14□□□□□ -0.47
USP38-202ENST00000510377 LDLRAD2Q5SZI1 272 aa12.14□□□□□ -0.47
USP38-202ENST00000510377 C1orf162Q8NEQ5 155 aaPredicted RBP12.14□□□□□ -0.47
USP38-202ENST00000510377 FBXL15Q9H469 300 aa12.14□□□□□ -0.47
USP38-202ENST00000510377 LAMA1P25391 3075 aa12.14□□□□□ -0.47
USP38-202ENST00000510377 RNASE2P10153 161 aaKnown RBP12.14□□□□□ -0.47
USP38-202ENST00000510377 TIMM23BQ5SRD1 257 aa12.14□□□□□ -0.47
USP38-202ENST00000510377 TMEM116Q8NCL8 245 aa12.14□□□□□ -0.47
USP38-202ENST00000510377 TLN1Q9Y490 2541 aaKnown RBP12.13□□□□□ -0.47
USP38-202ENST00000510377 ZNF785A8K8V0 405 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 IGHV1-46P01743 117 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 LIPFP07098 398 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 UTF1Q5T230 341 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 CIARTQ8N365 385 aaPredicted RBP12.13□□□□□ -0.47
USP38-202ENST00000510377 TCRBV4S1A1TA0A5B7 111 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 SRRM4A7MD48 611 aaKnown RBP12.13□□□□□ -0.47
USP38-202ENST00000510377 FXYD7P58549 80 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 CHODLQ9H9P2 273 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 TMEM14BQ9NUH8 114 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 LY96Q9Y6Y9 160 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 KMT2EQ8IZD2 1858 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 ATG2AQ2TAZ0 1938 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 C2orf83Q53S99 150 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 EXOC3-AS1Q8N2X6 119 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 PRSS33Q8NF86 280 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 C18orf15Q96N68 181 aa12.13□□□□□ -0.47
USP38-202ENST00000510377 DLX1P56177 255 aa12.12□□□□□ -0.47
USP38-202ENST00000510377 C1orf185Q5T7R7 199 aa12.12□□□□□ -0.47
USP38-202ENST00000510377 J3KRW8 73 aa12.12□□□□□ -0.47
USP38-202ENST00000510377 PROP1O75360 226 aa12.12□□□□□ -0.47
USP38-202ENST00000510377 NDFIP1Q9BT67 221 aa12.12□□□□□ -0.47
USP38-202ENST00000510377 CD40P25942 277 aa12.12□□□□□ -0.47
USP38-202ENST00000510377 RBPMS2Q6ZRY4 209 aaKnown RBP12.12□□□□□ -0.47
USP38-202ENST00000510377 ABHD17AQ96GS6 310 aa12.12□□□□□ -0.47
USP38-202ENST00000510377 K7ERU9 68 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 F2RL2O00254 374 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 MC5RP33032 325 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 MORN5Q5VZ52 161 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 HCFC1P51610 2035 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 A0A087X0K7 114 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 RPL11P62913 178 aaKnown RBP12.11□□□□□ -0.47
USP38-202ENST00000510377 SSBP2P81877 361 aaPredicted RBP12.11□□□□□ -0.47
USP38-202ENST00000510377 MBNL2Q5VZF2 373 aaKnown RBP12.11□□□□□ -0.47
USP38-202ENST00000510377 SPACA3Q8IXA5 215 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 RPRMLQ8N4K4 120 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 NEUROG1Q92886 237 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 NOTCH3Q9UM47 2321 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 IGLL1P15814 213 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 TWIST1Q15672 202 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 C11orf52Q96A22 123 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 ZNF257Q9Y2Q1 563 aa12.11□□□□□ -0.47
USP38-202ENST00000510377 ANKRD11Q6UB99 2663 aaPredicted RBP12.11□□□□□ -0.47
USP38-202ENST00000510377 IL4P05112 153 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 SFTPCP11686 197 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 CKS2P33552 79 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 LOXL3P58215 753 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 PRR20EP86478 221 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 PRR20CP86479 221 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 PRR20DP86480 221 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 PRR20BP86481 221 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 PRR20AP86496 221 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 AMMECR1LQ6DCA0 310 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 OR10AG1Q8NH19 301 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 TMEM186Q96B77 213 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 UFC1Q9Y3C8 167 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 LSM4Q9Y4Z0 139 aaKnown RBP12.1□□□□□ -0.47
USP38-202ENST00000510377 SLC25A15Q9Y619 301 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 LINC00312Q9Y6C7 94 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 A0A1B0GUT8 65 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms