RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 NAT8BQ9UHF3 227 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 TRAPPC1Q9Y5R8 145 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 CLDN34H7C241 214 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 CAMPP49913 170 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 LINC00205P59089 165 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 YPEL3P61236 119 aaPredicted RBP4.09□□□□□ -1.75
PHF3-210ENST00000509876 MEF2BQ02080 365 aaPredicted RBP4.09□□□□□ -1.75
PHF3-210ENST00000509876 NDUFA11Q86Y39 141 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 C5orf56Q8N8D9 126 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 PRSS3P2Q8NHM4 247 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 GLMPQ8WWB7 406 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 A0A087X0M5 115 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 TRAV21A0A0B4J279 112 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 A0A1B0GX30 115 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 A6NDX4 124 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 FCN1O00602 326 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 NDUFB4O95168 129 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 CRYBB3P26998 211 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 IBA57Q5T440 356 aaKnown RBP4.09□□□□□ -1.75
PHF3-210ENST00000509876 BCL6BQ8N143 479 aaPredicted RBP4.09□□□□□ -1.75
PHF3-210ENST00000509876 C4orf3Q8WVX3 66 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 ATG101Q9BSB4 218 aa4.09□□□□□ -1.75
PHF3-210ENST00000509876 INTS1Q8N201 2190 aaKnown RBP4.09□□□□□ -1.76
PHF3-210ENST00000509876 PEX7O00628 323 aa4.09□□□□□ -1.76
PHF3-210ENST00000509876 SPINK4O60575 86 aa4.09□□□□□ -1.76
PHF3-210ENST00000509876 CD81P60033 236 aa4.09□□□□□ -1.76
PHF3-210ENST00000509876 PUSL1Q8N0Z8 303 aaKnown RBP4.09□□□□□ -1.76
PHF3-210ENST00000509876 ASCL2Q99929 193 aa4.09□□□□□ -1.76
PHF3-210ENST00000509876 CEP250Q9BV73 2442 aa4.09□□□□□ -1.76
PHF3-210ENST00000509876 ZGRF1Q86YA3 2104 aa4.09□□□□□ -1.76
PHF3-210ENST00000509876 CXCL2P19875 107 aa4.09□□□□□ -1.76
PHF3-210ENST00000509876 TCTEX1D4Q5JR98 221 aa4.09□□□□□ -1.76
PHF3-210ENST00000509876 LY6G5BQ8NDX9 201 aa4.09□□□□□ -1.76
PHF3-210ENST00000509876 C9JCJ5 164 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 ZNF688P0C7X2 276 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 TCL1AP56279 114 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 TREML4Q6UXN2 200 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 EIF4E3Q8N5X7 224 aaKnown RBP4.08□□□□□ -1.76
PHF3-210ENST00000509876 OR11H4Q8NGC9 324 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 ST6GALNAC6Q969X2 333 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 NEU1Q99519 415 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 TMEM50AO95807 157 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 BTCP35070 178 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 C8orf86Q6ZUL3 223 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 AP1S3Q96PC3 154 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 WDR83OSQ9Y284 106 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 PHF3Q92576 2039 aaKnown RBP4.08□□□□□ -1.76
PHF3-210ENST00000509876 MPTX1A8MV57 137 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 ZNF841Q6ZN19 808 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 Q6ZN92 141 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 UBE2E2Q96LR5 201 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 SEC11CQ9BY50 192 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 HOXD3P31249 432 aaPredicted RBP4.08□□□□□ -1.76
PHF3-210ENST00000509876 TMEM95Q3KNT9 176 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 FAM74A4Q5TZK3 123 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 MEGF9Q9H1U4 602 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 NRN1Q9NPD7 142 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 ZNF98A6NK75 572 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 ODF3BA8MYP8 253 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 CD7P09564 240 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 KRTAP10-9P60411 292 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 C1orf194Q5T5A4 169 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 SPATA31B1PQ5VZV4 182 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 SLC7A5P1Q8MH63 180 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 SGK494Q96LW2 274 aa4.08□□□□□ -1.76
PHF3-210ENST00000509876 TPSG1Q9NRR2 321 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 RNASE1P07998 156 aaKnown RBP4.07□□□□□ -1.76
PHF3-210ENST00000509876 LINC00477Q96M19 166 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 TRGV4A0A0C4DH28 118 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 IGHV7-4-1A0A0J9YVY3 117 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 TMEM262E9PQX1 116 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 GCGP01275 180 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 DEFB131AP59861 70 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 POU2AF1Q16633 256 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 TMEM14EPQ6UXP3 125 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 ZNF295-AS1Q8N0V1 137 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 PSMG3-AS1Q96PY0 264 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 TNFRSF18Q9Y5U5 241 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 SELENOKQ9Y6D0 94 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 FAM74A7A6NL05 159 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 SCRT1Q9BWW7 348 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 FCN3O75636 299 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 AMTP48728 403 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 BLCAPP62952 87 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 ZNF415Q09FC8 603 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 BTN1A1Q13410 526 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 RNASEKQ6P5S7 137 aaKnown RBP4.07□□□□□ -1.76
PHF3-210ENST00000509876 RCC1LQ96I51 464 aaKnown RBP4.07□□□□□ -1.76
PHF3-210ENST00000509876 AJUBAQ96IF1 538 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 TMEM101Q96IK0 257 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 GSX1Q9H4S2 264 aaPredicted RBP4.07□□□□□ -1.76
PHF3-210ENST00000509876 CACNA1GO43497 2377 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 PIEZO1Q92508 2521 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 MED13Q9UHV7 2174 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 IGHV7-81A0A0B4J1V7 117 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 NTF3P20783 257 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 INSL3P51460 131 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 SHANK2-AS3Q9BTD1 123 aa4.07□□□□□ -1.76
PHF3-210ENST00000509876 YTHDF2Q9Y5A9 579 aaKnown RBP4.07□□□□□ -1.76
PHF3-210ENST00000509876 PPP1R17O96001 155 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms