RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SPATA25Q9BR10 227 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 ELOVL1Q9BW60 279 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 RETNQ9HD89 108 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 HEYLQ9NQ87 328 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 KCNIP3Q9Y2W7 256 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 TMED3Q9Y3Q3 217 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 PUS1Q9Y606 427 aaKnown RBP eCLIP5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 EPPK1P58107 5090 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 IGHV7-4-1A0A0J9YVY3 117 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 RBMY1BA6NDE4 496 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 RBMY1EA6NEQ0 496 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 PRSS47A8MTI9 375 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 NUPL2O15504 423 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 MBPP02686 304 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 RBMY1DP0C7P1 496 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 INPP1P49441 399 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 ELLP55199 621 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 MZT2BQ6NZ67 158 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 SPSB3Q6PJ21 355 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 ACOT7LQ6ZUV0 252 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 DEFB125Q8N687 156 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 TMEM116Q8NCL8 245 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 RNASEH2CQ8TDP1 164 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 NPIPB3Q92617 1050 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 TXN2Q99757 166 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 PDCD10Q9BUL8 212 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 C20orf24Q9BUV8 137 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 VSIRQ9H7M9 311 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 DAZ1Q9NQZ3 744 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 THYN1Q9P016 225 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 PEMTQ9UBM1 199 aa5.36□□□□□ -1.55
TOPBP1-207ENST00000509162 C9orf118A6NHY6 69 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 A8MZ25 164 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 B5MCH6 92 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 FAM90A26D6RGX4 464 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 K7EPK0 472 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 CORTO00230 105 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 WRBO00258 174 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 SYNGR2O43760 224 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 SSSCA1O60232 199 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 GNG7O60262 68 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 SIX6O95475 246 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 SNCAP37840 140 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 LINC00310P59036 64 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 CD81P60033 236 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 ZNF90Q03938 601 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 GAMTQ14353 236 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 IAH1Q2TAA2 248 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 LCN12Q6JVE5 192 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 TMEM14EPQ6UXP3 125 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 ZNF600Q6ZNG1 722 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 THAP8Q8NA92 274 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 DUSP18Q8NEJ0 188 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 OR2K2Q8NGT1 345 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 DYNLRB2Q8TF09 96 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 ACY3Q96HD9 319 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 NEURL2Q9BR09 285 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 ENY2Q9NPA8 101 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 SMPXQ9UHP9 88 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 UFC1Q9Y3C8 167 aa5.35□□□□□ -1.55
TOPBP1-207ENST00000509162 DNAH2Q9P225 4427 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 LOC102723971A0A1B0GUV8 181 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 FAM240BA0A1B0GVZ2 78 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 CENPXA8MT69 81 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 H0YIZ8 118 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 K7EMT4 169 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 TSPAN4O14817 238 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 IFNA10P01566 189 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 IL5P05113 134 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 GATA2P23769 480 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 OR10J1P30954 320 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 NKX2-1P43699 371 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 H2BFSP57053 126 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 FAM106AQ4KMX7 169 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 CCDC28AQ8IWP9 274 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 OR1S2Q8NGQ3 325 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 COQ8AQ8NI60 647 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 GLMPQ8WWB7 406 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 TM2D3Q9BRN9 247 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 MARVELD1Q9BSK0 173 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 RHPN1-AS1Q9BWJ2 59 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 TECRQ9NZ01 308 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 MRPL27Q9P0M9 148 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 UBQLN2Q9UHD9 624 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 SMAD5-AS1Q9Y6J3 95 aa5.34□□□□□ -1.55
TOPBP1-207ENST00000509162 IGSF23A1L1A6 192 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 C7orf66A4D0T2 115 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 KRTAP9-7A8MTY7 169 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 CYB5BO43169 146 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 TOMM40O96008 361 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 PSG1P11464 419 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 CRYBB3P26998 211 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 NPBWR1P48145 328 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 RELQ04864 619 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 GUCA2BQ16661 112 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 HAGHQ16775 308 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 RNF151Q2KHN1 245 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 DEFB121Q5J5C9 76 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 SPANXN5Q5MJ07 72 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 CFAP161Q6P656 301 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms