RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 YAE1D1Q9NRH1 226 aa8.12□□□□□ -1.11
PDGFRA-207ENST00000509092 DNAH14Q0VDD8 3507 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 C19orf71A6NCJ1 209 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 SRRM4A7MD48 611 aaKnown RBP8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 P01737 135 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 ACP1P24666 158 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 KIR2DL1P43626 348 aaPredicted RBP8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 ZNF562Q6V9R5 426 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 TEX29Q8N6K0 151 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 OR9G1Q8NH87 305 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 CABIN1Q9Y6J0 2220 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 PRSS29PA6NIE9 313 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 C12orf77C9JDV5 145 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 C16orf97H3BN30 126 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 LINC00205P59089 165 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 SRYQ05066 204 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 RRN3P1Q2M238 152 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 TMEM196Q5HYL7 178 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 FAM53AQ6NSI3 398 aaPredicted RBP8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 POLDIP2Q9Y2S7 368 aa8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 KLF13Q9Y2Y9 288 aaPredicted RBP8.11□□□□□ -1.11
PDGFRA-207ENST00000509092 GAGE12JA6NER3 117 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 J3QT63 122 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 GAGE7O76087 117 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 NGFP01138 241 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 LTAP01374 205 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 GAGE12FP0CL80 117 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 GAGE12GP0CL81 117 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 GAGE12IP0CL82 117 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 COL9A1P20849 921 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 ERVK-16P61578 105 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 GAGE4Q13068 117 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 OR1C1Q15619 314 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 C12orf74Q32Q52 190 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 Q8TCH9 128 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 COQ2Q96H96 371 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 MLST8Q9BVC4 326 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 TMEM30CPA0ZSE6 113 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 LILRA5A6NI73 299 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 PPIFP30405 207 aaKnown RBP8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 TFF2Q03403 129 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 LINC00322Q6ZN03 302 aaPredicted RBP8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 GATD1Q8NB37 220 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 OR5AN1Q8NGI8 311 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 GLMPQ8WWB7 406 aa8.1□□□□□ -1.11
PDGFRA-207ENST00000509092 OOEPA6NGQ2 149 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 FAM90A27PA6NNH2 459 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 NPIPB5A8MRT5 1133 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 FCGR3BO75015 233 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 SPINK2P20155 84 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 CFHR2P36980 270 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 DSCR4P56555 118 aaPredicted RBP8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 TAL2Q16559 108 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 CFAP126Q5VTH2 177 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 NFE4Q86UQ8 179 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 MOGAT3Q86VF5 341 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 SRXN1Q9BYN0 137 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 KLF12Q9Y4X4 402 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 A0A087WX48 190 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 TRAV3A0A0B4J244 114 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 TRAV5A0A0B4J249 113 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 FABP5P3A8MUU1 101 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 SHISA9B4DS77 424 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 PRRG2O14669 202 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 MT-CO3P00414 261 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 PLGLB1Q02325 96 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 AAED1Q7RTV5 226 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 Q8IYB0 196 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 PPDPFLQ8WWR9 84 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 IFI27L1Q96BM0 104 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 CITED1Q99966 193 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 ENY2Q9NPA8 101 aa8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 MRPS17Q9Y2R5 130 aaKnown RBP8.09□□□□□ -1.11
PDGFRA-207ENST00000509092 IGKV1OR2-108A0A075B7D4 117 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 A0A1W2PQF6 199 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 SS18L1O75177 396 aaPredicted RBP8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 FAM106CPP0CH98 169 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 SRD5A1P18405 259 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 IFI27P40305 119 aaPredicted RBP8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 ID1P41134 155 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 GNG5P63218 68 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 LOXL1Q08397 574 aaPredicted RBP8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 FOXF2Q12947 444 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 FAM106AQ4KMX7 169 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 MORN5Q5VZ52 161 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 ITLN1Q8WWA0 313 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 DAZAP1Q96EP5 407 aaKnown RBP8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 PAXXQ9BUH6 204 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 SPANXA1Q9NS26 97 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 TMEM140Q9NV12 185 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 EPDR1Q9UM22 224 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 NCOR1O75376 2440 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 IGKV2D-26A0A0A0MRZ7 120 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 A0A0J9YW62 118 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 C15orf61A6NNL5 157 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 HBDP02042 147 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 RBP4P02753 201 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 SLC25A5P05141 298 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms