RNA–Protein interactions for RNA: ENST00000507836.1

CAST-219, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-219ENST00000507836 MCM3APO60318 1980 aa0.15□□□□□ -2.39
CAST-219ENST00000507836 CASP8AP2Q9UKL3 1982 aa0.15□□□□□ -2.39
CAST-219ENST00000507836 ROBO3Q96MS0 1386 aa0.15□□□□□ -2.39
CAST-219ENST00000507836 COL1A1P02452 1464 aaPredicted RBP0.15□□□□□ -2.39
CAST-219ENST00000507836 SNAPC4Q5SXM2 1469 aa0.15□□□□□ -2.39
CAST-219ENST00000507836 TAF1LQ8IZX4 1826 aa0.15□□□□□ -2.39
CAST-219ENST00000507836 IGHV1-58A0A0C4DH39 117 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 hADV38S2A0JD32 116 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 C7orf71A4D174 169 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 M0R036 132 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 TIMM17BO60830 172 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 TTRP02766 147 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 RPS17P08708 135 aaKnown RBP0.14□□□□□ -2.39
CAST-219ENST00000507836 KDELR1P24390 212 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 SRIP30626 198 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 EIF5AP63241 154 aaKnown RBP0.14□□□□□ -2.39
CAST-219ENST00000507836 LCA10Q71F78 164 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 TRAPPC5Q8IUR0 188 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 GDPD1Q8N9F7 314 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 CT55Q8WUE5 264 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 FAM172AQ8WUF8 416 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 SMR3AQ99954 134 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 ORMDL1Q9P0S3 153 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 TNFSF18Q9UNG2 199 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 ADGRB2O60241 1585 aa0.14□□□□□ -2.39
CAST-219ENST00000507836 MED1Q15648 1581 aaPredicted RBP0.14□□□□□ -2.39
CAST-219ENST00000507836 ZNF106Q9H2Y7 1883 aaKnown RBP0.14□□□□□ -2.39
CAST-219ENST00000507836 A0A087WUJ7 227 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 NUPR2A6NF83 97 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 CST8O60676 142 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 ZNF682O95780 498 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 DHFRP00374 187 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 IGLV3-1P01715 115 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 PPIBP23284 216 aaKnown RBP0.13□□□□□ -2.39
CAST-219ENST00000507836 SRP14P37108 136 aaKnown RBP0.13□□□□□ -2.39
CAST-219ENST00000507836 SERPINB9P50453 376 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 MAGOHP61326 146 aaKnown RBP0.13□□□□□ -2.39
CAST-219ENST00000507836 ITGB3BPQ13352 177 aaPredicted RBP0.13□□□□□ -2.39
CAST-219ENST00000507836 C12orf74Q32Q52 190 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 KRTAP26-1Q6PEX3 210 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 OR6V1Q8N148 313 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 PLPP5Q8NEB5 264 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 STAG3L4Q8TBR4 150 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 GPER1Q99527 375 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 C20orf27Q9GZN8 174 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 PRELID3BQ9Y3B1 194 aa0.13□□□□□ -2.39
CAST-219ENST00000507836 CHCHD2Q9Y6H1 151 aaPredicted RBP0.13□□□□□ -2.39
CAST-219ENST00000507836 FAT4Q6V0I7 4981 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 TRAV23DV6A0A075B6W5 121 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 A0A0D9SG42 100 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 F8W1H4 67 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 H3BRM9 83 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 PDE6DO43924 150 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 C8GP07360 202 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 SERPINA6P08185 405 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 OMPP47874 163 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 AESQ08117 197 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 C2orf82Q6UX34 121 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 TEN1Q86WV5 123 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 PDZD9Q8IXQ8 264 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 OR5D14Q8NGL3 314 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 BORCS7Q96B45 105 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 C2orf50Q96LR7 162 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 LINC00052Q96N35 136 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 TP53RKQ96S44 253 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 WFDC10AQ9H1F0 79 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 TMEM138Q9NPI0 162 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 TVP23BQ9NYZ1 205 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 IDI2-AS1Q9NZ38 188 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 PCTPQ9UKL6 214 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 NAV2Q8IVL1 2488 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 NAV3Q8IVL0 2385 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 RIMBP3CA6NJZ7 1639 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 RIMBP3BA6NNM3 1639 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 RIMBP3Q9UFD9 1639 aa0.12□□□□□ -2.39
CAST-219ENST00000507836 SYNE1Q8NF91 8797 aaKnown RBP0.12□□□□□ -2.39
CAST-219ENST00000507836 ALPK3Q96L96 1907 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 PLXND1Q9Y4D7 1925 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 TRAV10A0A0B4J240 114 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 SMIM23A6NLE4 172 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 NDUFB3O43676 98 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 NUPR1O60356 82 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 RPP14O95059 124 aaKnown RBP0.11□□□□□ -2.39
CAST-219ENST00000507836 HOXA6P31267 233 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 RNASE4P34096 147 aaKnown RBP0.11□□□□□ -2.39
CAST-219ENST00000507836 KRR1Q13601 381 aaKnown RBP0.11□□□□□ -2.39
CAST-219ENST00000507836 SPINK9Q5DT21 86 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 C6orf52Q5T4I8 152 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 LYRM7Q5U5X0 104 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 HAGHLQ6PII5 290 aaPredicted RBP0.11□□□□□ -2.39
CAST-219ENST00000507836 Q6Q795 121 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 C12orf45Q8N5I9 185 aaPredicted RBP0.11□□□□□ -2.39
CAST-219ENST00000507836 OR51A2Q8NGJ7 313 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 TSKUQ8WUA8 353 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 ITFG2Q969R8 447 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 SLC25A21Q9BQT8 299 aaPredicted RBP0.11□□□□□ -2.39
CAST-219ENST00000507836 GGACTQ9BVM4 153 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 TRIM4Q9C037 500 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 MED29Q9NX70 200 aa0.11□□□□□ -2.39
CAST-219ENST00000507836 GLTPQ9NZD2 209 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms