RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 ACTL10Q5JWF8 245 aa11.68□□□□□ -0.54
HOXC4-203ENST00000507650 ETFRF1Q6IPR1 90 aa11.68□□□□□ -0.54
HOXC4-203ENST00000507650 STHQ8IWL8 128 aa11.68□□□□□ -0.54
HOXC4-203ENST00000507650 OR1S1Q8NH92 325 aa11.68□□□□□ -0.54
HOXC4-203ENST00000507650 SDHCQ99643 169 aaPredicted RBP11.68□□□□□ -0.54
HOXC4-203ENST00000507650 SRRQ9GZT4 340 aa11.68□□□□□ -0.54
HOXC4-203ENST00000507650 CLEC5AQ9NY25 188 aa11.68□□□□□ -0.54
HOXC4-203ENST00000507650 X6R8D5 127 aa11.68□□□□□ -0.54
HOXC4-203ENST00000507650 SFT2D2O95562 160 aa11.67□□□□□ -0.54
HOXC4-203ENST00000507650 VAMP1P23763 118 aa11.67□□□□□ -0.54
HOXC4-203ENST00000507650 SRPXP78539 464 aa11.67□□□□□ -0.54
HOXC4-203ENST00000507650 BAK1Q16611 211 aa11.67□□□□□ -0.54
HOXC4-203ENST00000507650 PSMG4Q5JS54 123 aa11.67□□□□□ -0.54
HOXC4-203ENST00000507650 RNF125Q96EQ8 232 aa11.67□□□□□ -0.54
HOXC4-203ENST00000507650 RAB40CQ96S21 281 aa11.67□□□□□ -0.54
HOXC4-203ENST00000507650 IGHV4-28A0A0C4DH34 117 aa11.66□□□□□ -0.54
HOXC4-203ENST00000507650 DUXBA0A1W2PPF3 345 aa11.66□□□□□ -0.54
HOXC4-203ENST00000507650 ZNF705EA8MWA4 302 aaPredicted RBP11.66□□□□□ -0.54
HOXC4-203ENST00000507650 SCGB2A1O75556 95 aa11.66□□□□□ -0.54
HOXC4-203ENST00000507650 ANXA3P12429 323 aa11.66□□□□□ -0.54
HOXC4-203ENST00000507650 FAUP35544 74 aaKnown RBP11.66□□□□□ -0.54
HOXC4-203ENST00000507650 GDF5OSQ5U4N7 250 aa11.66□□□□□ -0.54
HOXC4-203ENST00000507650 RPP25LQ8N5L8 163 aaKnown RBP11.66□□□□□ -0.54
HOXC4-203ENST00000507650 TMEM217Q8N7C4 229 aa11.66□□□□□ -0.54
HOXC4-203ENST00000507650 C11orf45Q8TAV5 145 aa11.66□□□□□ -0.54
HOXC4-203ENST00000507650 C17orf77Q96MU5 243 aa11.66□□□□□ -0.54
HOXC4-203ENST00000507650 WDR12Q9GZL7 423 aaKnown RBP11.66□□□□□ -0.54
HOXC4-203ENST00000507650 MAGT1Q9H0U3 335 aa11.66□□□□□ -0.54
HOXC4-203ENST00000507650 NRN1Q9NPD7 142 aa11.66□□□□□ -0.54
HOXC4-203ENST00000507650 CACFD1Q9UGQ2 172 aa11.66□□□□□ -0.54
HOXC4-203ENST00000507650 HELTA6NFD8 242 aa11.65□□□□□ -0.54
HOXC4-203ENST00000507650 CCDC160A6NGH7 325 aa11.65□□□□□ -0.54
HOXC4-203ENST00000507650 SOCS3O14543 225 aa11.65□□□□□ -0.54
HOXC4-203ENST00000507650 IFNA4P05014 189 aa11.65□□□□□ -0.54
HOXC4-203ENST00000507650 SLC25A6P12236 298 aa11.65□□□□□ -0.54
HOXC4-203ENST00000507650 BTCP35070 178 aa11.65□□□□□ -0.54
HOXC4-203ENST00000507650 GPX4P36969 197 aaPredicted RBP11.65□□□□□ -0.54
HOXC4-203ENST00000507650 SIGLEC15Q6ZMC9 328 aa11.65□□□□□ -0.54
HOXC4-203ENST00000507650 NOXA1Q86UR1 476 aa11.65□□□□□ -0.54
HOXC4-203ENST00000507650 NARS2Q96I59 477 aaKnown RBP11.65□□□□□ -0.54
HOXC4-203ENST00000507650 SLC25A21Q9BQT8 299 aaPredicted RBP11.65□□□□□ -0.54
HOXC4-203ENST00000507650 FBXL17Q9UF56 701 aa11.65□□□□□ -0.54
HOXC4-203ENST00000507650 ELOA3CA0A087WX78 387 aaPredicted RBP11.64□□□□□ -0.55
HOXC4-203ENST00000507650 SPP1P10451 314 aa11.64□□□□□ -0.55
HOXC4-203ENST00000507650 AP3S2P59780 193 aa11.64□□□□□ -0.55
HOXC4-203ENST00000507650 OR2F1Q13607 317 aa11.64□□□□□ -0.55
HOXC4-203ENST00000507650 GGNBP1Q5YKI7 109 aa11.64□□□□□ -0.55
HOXC4-203ENST00000507650 TMEM182Q6ZP80 229 aaPredicted RBP11.64□□□□□ -0.55
HOXC4-203ENST00000507650 THAP8Q8NA92 274 aa11.64□□□□□ -0.55
HOXC4-203ENST00000507650 FLVCR2Q9UPI3 526 aa11.64□□□□□ -0.55
HOXC4-203ENST00000507650 ZFP92A6NM28 416 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 H3BMM0 161 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 DEDDO75618 318 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 ADAP1O75689 374 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 HOXB5P09067 269 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 S100A5P33763 92 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 EIF2B2P49770 351 aaKnown RBP11.63□□□□□ -0.55
HOXC4-203ENST00000507650 PRR20EP86478 221 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 PRR20CP86479 221 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 PRR20DP86480 221 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 PRR20BP86481 221 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 PRR20AP86496 221 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 MORN3Q6PF18 240 aaPredicted RBP11.63□□□□□ -0.55
HOXC4-203ENST00000507650 CENPSQ8N2Z9 138 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 DEDD2Q8WXF8 326 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 PBDC1Q9BVG4 233 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 CELA1Q9UNI1 258 aa11.63□□□□□ -0.55
HOXC4-203ENST00000507650 KLK5Q9Y337 293 aaPredicted RBP11.63□□□□□ -0.55
HOXC4-203ENST00000507650 ZNF701M0R085 212 aaPredicted RBP11.62□□□□□ -0.55
HOXC4-203ENST00000507650 AP2S1P53680 142 aaPredicted RBP11.62□□□□□ -0.55
HOXC4-203ENST00000507650 ATP5IP56385 69 aaPredicted RBP11.62□□□□□ -0.55
HOXC4-203ENST00000507650 LYZP61626 148 aa11.62□□□□□ -0.55
HOXC4-203ENST00000507650 OR8G2PQ6IF36 304 aa11.62□□□□□ -0.55
HOXC4-203ENST00000507650 SLC35E1Q96K37 410 aa11.62□□□□□ -0.55
HOXC4-203ENST00000507650 TRGV9Q99603 122 aa11.62□□□□□ -0.55
HOXC4-203ENST00000507650 TMED3Q9Y3Q3 217 aa11.62□□□□□ -0.55
HOXC4-203ENST00000507650 C9orf170A2RU37 121 aa11.61□□□□□ -0.55
HOXC4-203ENST00000507650 H3BP45 60 aa11.61□□□□□ -0.55
HOXC4-203ENST00000507650 WRBO00258 174 aa11.61□□□□□ -0.55
HOXC4-203ENST00000507650 SYNGR2O43760 224 aa11.61□□□□□ -0.55
HOXC4-203ENST00000507650 NDUFB6O95139 128 aa11.61□□□□□ -0.55
HOXC4-203ENST00000507650 HLA-DRB4P13762 266 aa11.61□□□□□ -0.55
HOXC4-203ENST00000507650 SEPSECSQ9HD40 501 aaKnown RBP11.61□□□□□ -0.55
HOXC4-203ENST00000507650 HLA-DRB4X5D2U9 266 aa11.61□□□□□ -0.55
HOXC4-203ENST00000507650 PMS2P5A8MQ11 134 aa11.6□□□□□ -0.55
HOXC4-203ENST00000507650 CCNKO75909 580 aa11.6□□□□□ -0.55
HOXC4-203ENST00000507650 MIFP14174 115 aa11.6□□□□□ -0.55
HOXC4-203ENST00000507650 GATA2P23769 480 aaPredicted RBP11.6□□□□□ -0.55
HOXC4-203ENST00000507650 TMEM41BQ5BJD5 291 aa11.6□□□□□ -0.55
HOXC4-203ENST00000507650 MFFQ9GZY8 342 aa11.6□□□□□ -0.55
HOXC4-203ENST00000507650 HRH4Q9H3N8 390 aa11.6□□□□□ -0.55
HOXC4-203ENST00000507650 XCL2Q9UBD3 114 aa11.6□□□□□ -0.55
HOXC4-203ENST00000507650 NKX2-1P43699 371 aaPredicted RBP11.59□□□□□ -0.55
HOXC4-203ENST00000507650 SNRPD3P62318 126 aaKnown RBP11.59□□□□□ -0.55
HOXC4-203ENST00000507650 ID3Q02535 119 aa11.59□□□□□ -0.55
HOXC4-203ENST00000507650 SPANXN2Q5MJ10 180 aa11.59□□□□□ -0.55
HOXC4-203ENST00000507650 LGALS9CQ6DKI2 356 aa11.59□□□□□ -0.55
HOXC4-203ENST00000507650 Q6ZTC4 211 aa11.59□□□□□ -0.55
HOXC4-203ENST00000507650 ZNF709Q8N972 641 aa11.59□□□□□ -0.55
HOXC4-203ENST00000507650 OR4D5Q8NGN0 318 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms