RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 BPIFCQ8NFQ6 507 aa10.87□□□□□ -0.67
RNF4-208ENST00000507247 RCC1LQ96I51 464 aaKnown RBP10.87□□□□□ -0.67
RNF4-208ENST00000507247 ARV1Q9H2C2 271 aa10.87□□□□□ -0.67
RNF4-208ENST00000507247 ZFAND3Q9H8U3 227 aa10.87□□□□□ -0.67
RNF4-208ENST00000507247 PUS1Q9Y606 427 aaKnown RBP eCLIP10.87□□□□□ -0.67
RNF4-208ENST00000507247 IGHV3OR16-8A0A075B7F1 116 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 JTBO76095 146 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 LINC00869P0C866 280 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 RD3LP0DJH9 198 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 PRR20EP86478 221 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 PRR20CP86479 221 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 PRR20DP86480 221 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 PRR20BP86481 221 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 PRR20AP86496 221 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 RELQ04864 619 aaPredicted RBP10.86□□□□□ -0.67
RNF4-208ENST00000507247 RAB31Q13636 194 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 SHISA2Q6UWI4 295 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 TOMM20LQ6UXN7 152 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 UNQ9165/PRO28630Q6UXU0 137 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 STPG3Q8N7X2 389 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 DPF1Q92782 380 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 SH3BGRL3Q9H299 93 aa10.86□□□□□ -0.67
RNF4-208ENST00000507247 NDUFA4O00483 81 aa10.85□□□□□ -0.67
RNF4-208ENST00000507247 ZP3P21754 424 aa10.85□□□□□ -0.67
RNF4-208ENST00000507247 RPL29P47914 159 aaKnown RBP10.85□□□□□ -0.67
RNF4-208ENST00000507247 SELENOTP62341 195 aa10.85□□□□□ -0.67
RNF4-208ENST00000507247 GPHB5Q86YW7 130 aa10.85□□□□□ -0.67
RNF4-208ENST00000507247 OR51G1Q8NGK1 321 aa10.85□□□□□ -0.67
RNF4-208ENST00000507247 STOML3Q8TAV4 291 aa10.85□□□□□ -0.67
RNF4-208ENST00000507247 Q8WTZ3 238 aa10.85□□□□□ -0.67
RNF4-208ENST00000507247 GINS3Q9BRX5 216 aa10.85□□□□□ -0.67
RNF4-208ENST00000507247 PXMP4Q9Y6I8 212 aa10.85□□□□□ -0.67
RNF4-208ENST00000507247 WI2-2373I1.2A0A1W2PRP0 233 aa10.84□□□□□ -0.67
RNF4-208ENST00000507247 IL4P05112 153 aa10.84□□□□□ -0.67
RNF4-208ENST00000507247 FABP1P07148 127 aa10.84□□□□□ -0.67
RNF4-208ENST00000507247 MYCNOSP40205 109 aa10.84□□□□□ -0.67
RNF4-208ENST00000507247 SYNJ2BPP57105 145 aa10.84□□□□□ -0.67
RNF4-208ENST00000507247 LYZP61626 148 aa10.84□□□□□ -0.67
RNF4-208ENST00000507247 B2MP61769 119 aa10.84□□□□□ -0.67
RNF4-208ENST00000507247 KLF5Q13887 457 aaPredicted RBP10.84□□□□□ -0.67
RNF4-208ENST00000507247 USF2Q15853 346 aaPredicted RBP10.84□□□□□ -0.67
RNF4-208ENST00000507247 SLC51BQ86UW2 128 aa10.84□□□□□ -0.67
RNF4-208ENST00000507247 ZNF709Q8N972 641 aa10.84□□□□□ -0.67
RNF4-208ENST00000507247 TMEM190Q8WZ59 177 aa10.84□□□□□ -0.67
RNF4-208ENST00000507247 DLX4Q92988 240 aaPredicted RBP10.84□□□□□ -0.67
RNF4-208ENST00000507247 SLC39A9Q9NUM3 307 aa10.84□□□□□ -0.67
RNF4-208ENST00000507247 TIMM9Q9Y5J7 89 aa10.84□□□□□ -0.67
RNF4-208ENST00000507247 C17orf112F2Z3M2 114 aa10.83□□□□□ -0.68
RNF4-208ENST00000507247 ZNF207O43670 478 aaKnown RBP10.83□□□□□ -0.68
RNF4-208ENST00000507247 YIF1AO95070 293 aa10.83□□□□□ -0.68
RNF4-208ENST00000507247 TSPAN15O95858 294 aa10.83□□□□□ -0.68
RNF4-208ENST00000507247 TPT1P13693 172 aaKnown RBP10.83□□□□□ -0.68
RNF4-208ENST00000507247 EDN2P20800 178 aa10.83□□□□□ -0.68
RNF4-208ENST00000507247 FAM106AQ4KMX7 169 aa10.83□□□□□ -0.68
RNF4-208ENST00000507247 REC114Q7Z4M0 266 aa10.83□□□□□ -0.68
RNF4-208ENST00000507247 C1QL4Q86Z23 238 aa10.83□□□□□ -0.68
RNF4-208ENST00000507247 ST8SIA2Q92186 375 aa10.83□□□□□ -0.68
RNF4-208ENST00000507247 RNF125Q96EQ8 232 aa10.83□□□□□ -0.68
RNF4-208ENST00000507247 PSMG3Q9BT73 122 aaPredicted RBP10.83□□□□□ -0.68
RNF4-208ENST00000507247 C20orf24Q9BUV8 137 aa10.83□□□□□ -0.68
RNF4-208ENST00000507247 SLC25A32Q9H2D1 315 aa10.83□□□□□ -0.68
RNF4-208ENST00000507247 DOK5Q9P104 306 aa10.83□□□□□ -0.68
RNF4-208ENST00000507247 ZNF320A2RRD8 509 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 LGALS9O00182 355 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 SPP1P10451 314 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 C4BPBP20851 252 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 ELLP55199 621 aaPredicted RBP10.82□□□□□ -0.68
RNF4-208ENST00000507247 PLP1P60201 277 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 GCSAMLQ5JQS6 135 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 FFAR4Q5NUL3 377 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 PATE2Q6UY27 113 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 BAP18Q8IXM2 172 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 OR4F17Q8NGA8 305 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 GNPNAT1Q96EK6 184 aaPredicted RBP10.82□□□□□ -0.68
RNF4-208ENST00000507247 OR4F4Q96R69 305 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 PBDC1Q9BVG4 233 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 KCNIP2Q9NS61 270 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 PLA2G2EQ9NZK7 142 aa10.82□□□□□ -0.68
RNF4-208ENST00000507247 ANK2Q01484 3957 aa10.81□□□□□ -0.68
RNF4-208ENST00000507247 A8MWP6 167 aa10.81□□□□□ -0.68
RNF4-208ENST00000507247 CFDP00746 253 aaPredicted RBP10.81□□□□□ -0.68
RNF4-208ENST00000507247 PF4P02776 101 aa10.81□□□□□ -0.68
RNF4-208ENST00000507247 ORM2P19652 201 aa10.81□□□□□ -0.68
RNF4-208ENST00000507247 EIF5AP63241 154 aaKnown RBP10.81□□□□□ -0.68
RNF4-208ENST00000507247 TM4SF20Q53R12 229 aa10.81□□□□□ -0.68
RNF4-208ENST00000507247 LINC00482Q8N8I6 264 aa10.81□□□□□ -0.68
RNF4-208ENST00000507247 OR1B1Q8NGR6 318 aa10.81□□□□□ -0.68
RNF4-208ENST00000507247 OR2G3Q8NGZ4 309 aa10.81□□□□□ -0.68
RNF4-208ENST00000507247 VSIRQ9H7M9 311 aa10.81□□□□□ -0.68
RNF4-208ENST00000507247 MRPL27Q9P0M9 148 aaKnown RBP10.81□□□□□ -0.68
RNF4-208ENST00000507247 WNK1Q9H4A3 2382 aa10.81□□□□□ -0.68
RNF4-208ENST00000507247 TMEM213A2RRL7 107 aa10.8□□□□□ -0.68
RNF4-208ENST00000507247 OVOL1O14753 267 aa10.8□□□□□ -0.68
RNF4-208ENST00000507247 OR5G3P0C626 314 aa10.8□□□□□ -0.68
RNF4-208ENST00000507247 RAB2AP61019 212 aa10.8□□□□□ -0.68
RNF4-208ENST00000507247 Q6ZRG5 221 aa10.8□□□□□ -0.68
RNF4-208ENST00000507247 TMED6Q8WW62 240 aa10.8□□□□□ -0.68
RNF4-208ENST00000507247 TMEM37Q8WXS4 190 aa10.8□□□□□ -0.68
RNF4-208ENST00000507247 TENM1Q9UKZ4 2725 aa10.8□□□□□ -0.68
RNF4-208ENST00000507247 IGHV3-49A0A0A0MS15 119 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms