RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 LGALS9O00182 355 aa7.15□□□□□ -1.26
CLCN3-205ENST00000506924 IFNA4P05014 189 aa7.15□□□□□ -1.26
CLCN3-205ENST00000506924 SLC25A6P12236 298 aa7.15□□□□□ -1.26
CLCN3-205ENST00000506924 GP9P14770 177 aa7.15□□□□□ -1.26
CLCN3-205ENST00000506924 CBLN1P23435 193 aa7.15□□□□□ -1.26
CLCN3-205ENST00000506924 NPBWR1P48145 328 aa7.15□□□□□ -1.26
CLCN3-205ENST00000506924 POLR2GP62487 172 aaKnown RBP eCLIP7.15□□□□□ -1.26
CLCN3-205ENST00000506924 IAH1Q2TAA2 248 aaPredicted RBP7.15□□□□□ -1.26
CLCN3-205ENST00000506924 SPSB3Q6PJ21 355 aa7.15□□□□□ -1.26
CLCN3-205ENST00000506924 ZNF431Q8TF32 576 aaPredicted RBP7.15□□□□□ -1.26
CLCN3-205ENST00000506924 MITD1Q8WV92 249 aa7.15□□□□□ -1.26
CLCN3-205ENST00000506924 ZNF414Q96IQ9 312 aa7.15□□□□□ -1.26
CLCN3-205ENST00000506924 ZNF436Q9C0F3 470 aaPredicted RBP7.15□□□□□ -1.26
CLCN3-205ENST00000506924 CORTO00230 105 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 NDUFA4O00483 81 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 SYNGR2O43760 224 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 TMEM50AO95807 157 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 RND2P52198 227 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 DEFB114Q30KQ6 69 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 TIGITQ495A1 244 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 SPANXN5Q5MJ07 72 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 PRSS54Q6PEW0 395 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 BTNL8Q6UX41 500 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 C12orf45Q8N5I9 185 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-205ENST00000506924 OR4D5Q8NGN0 318 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 TMEM190Q8WZ59 177 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 ACY3Q96HD9 319 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 TXN2Q99757 166 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 ZMAT5Q9UDW3 170 aaKnown RBP7.14□□□□□ -1.27
CLCN3-205ENST00000506924 CACFD1Q9UGQ2 172 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 MLXQ9UH92 298 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 UFC1Q9Y3C8 167 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 U3KQ87 197 aa7.14□□□□□ -1.27
CLCN3-205ENST00000506924 IGHV3OR16-13A0A075B7E8 117 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 IGHV3-74A0A0B4J1X5 117 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 RPS10-NUDT3A0A1W2PQS6 291 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 C5orf51A6NDU8 294 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 C15orf62A8K5M9 175 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 A8MWP6 167 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 FAM90A26D6RGX4 464 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 SSSCA1O60232 199 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 CLN5O75503 358 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 MED6O75586 246 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 FCGR2BP31994 310 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-205ENST00000506924 NKX2-1P43699 371 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-205ENST00000506924 DEFA1P59665 94 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 DEFA3P59666 94 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 RELQ04864 619 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-205ENST00000506924 GUCA2BQ16661 112 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 TOMM20LQ6UXN7 152 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 ZBTB8BQ8NAP8 495 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-205ENST00000506924 OR4X1Q8NH49 305 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 RNASEH2CQ8TDP1 164 aaKnown RBP7.13□□□□□ -1.27
CLCN3-205ENST00000506924 NPIPB3Q92617 1050 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 PALMDQ9NP74 551 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 SIGLEC8Q9NYZ4 499 aa7.13□□□□□ -1.27
CLCN3-205ENST00000506924 PUS1Q9Y606 427 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLCN3-205ENST00000506924 SORL1Q92673 2214 aa7.12□□□□□ -1.27
CLCN3-205ENST00000506924 IGHV3-66A0A0C4DH42 116 aa7.12□□□□□ -1.27
CLCN3-205ENST00000506924 INMT-MINDY4F8WBC2 141 aa7.12□□□□□ -1.27
CLCN3-205ENST00000506924 SIX6O95475 246 aa7.12□□□□□ -1.27
CLCN3-205ENST00000506924 OR10J1P30954 320 aa7.12□□□□□ -1.27
CLCN3-205ENST00000506924 LCN12Q6JVE5 192 aa7.12□□□□□ -1.27
CLCN3-205ENST00000506924 SLC16A13Q7RTY0 426 aa7.12□□□□□ -1.27
CLCN3-205ENST00000506924 NOXA1Q86UR1 476 aa7.12□□□□□ -1.27
CLCN3-205ENST00000506924 TMEM61Q8N0U2 210 aa7.12□□□□□ -1.27
CLCN3-205ENST00000506924 ATP6V0BQ99437 205 aa7.12□□□□□ -1.27
CLCN3-205ENST00000506924 DAZ1Q9NQZ3 744 aaKnown RBP7.12□□□□□ -1.27
CLCN3-205ENST00000506924 PSENENQ9NZ42 101 aa7.12□□□□□ -1.27
CLCN3-205ENST00000506924 LSM4Q9Y4Z0 139 aaKnown RBP7.12□□□□□ -1.27
CLCN3-205ENST00000506924 IGKV3-7A0A075B6H7 116 aa7.11□□□□□ -1.27
CLCN3-205ENST00000506924 CCNKO75909 580 aa7.11□□□□□ -1.27
CLCN3-205ENST00000506924 IGKV1-17P01599 117 aa7.11□□□□□ -1.27
CLCN3-205ENST00000506924 MBPP02686 304 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-205ENST00000506924 APOHP02749 345 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-205ENST00000506924 IL5P05113 134 aa7.11□□□□□ -1.27
CLCN3-205ENST00000506924 IGLC1P0CG04 106 aa7.11□□□□□ -1.27
CLCN3-205ENST00000506924 C8orf88P0DMB2 117 aa7.11□□□□□ -1.27
CLCN3-205ENST00000506924 SLC25A4P12235 298 aa7.11□□□□□ -1.27
CLCN3-205ENST00000506924 RAB11AP62491 216 aa7.11□□□□□ -1.27
CLCN3-205ENST00000506924 ETFRF1Q6IPR1 90 aa7.11□□□□□ -1.27
CLCN3-205ENST00000506924 ZNF600Q6ZNG1 722 aa7.11□□□□□ -1.27
CLCN3-205ENST00000506924 GLMPQ8WWB7 406 aa7.11□□□□□ -1.27
CLCN3-205ENST00000506924 CIB3Q96Q77 187 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-205ENST00000506924 ASCL2Q99929 193 aa7.11□□□□□ -1.27
CLCN3-205ENST00000506924 TECRQ9NZ01 308 aaKnown RBP7.11□□□□□ -1.27
CLCN3-205ENST00000506924 MRPL27Q9P0M9 148 aaKnown RBP7.11□□□□□ -1.27
CLCN3-205ENST00000506924 RCL1Q9Y2P8 373 aaKnown RBP7.11□□□□□ -1.27
CLCN3-205ENST00000506924 STRAPQ9Y3F4 350 aaKnown RBP7.11□□□□□ -1.27
CLCN3-205ENST00000506924 LSM5Q9Y4Y9 91 aaKnown RBP7.11□□□□□ -1.27
CLCN3-205ENST00000506924 PRKDCP78527 4128 aaKnown RBP7.11□□□□□ -1.27
CLCN3-205ENST00000506924 TRAV14DV4A0A0A6YYC5 116 aa7.1□□□□□ -1.27
CLCN3-205ENST00000506924 IGHV7-4-1A0A0J9YVY3 117 aa7.1□□□□□ -1.27
CLCN3-205ENST00000506924 K7EMT4 169 aa7.1□□□□□ -1.27
CLCN3-205ENST00000506924 GOSR2O14653 212 aa7.1□□□□□ -1.27
CLCN3-205ENST00000506924 CD7P09564 240 aa7.1□□□□□ -1.27
CLCN3-205ENST00000506924 PAX9P55771 341 aa7.1□□□□□ -1.27
CLCN3-205ENST00000506924 CD81P60033 236 aa7.1□□□□□ -1.27
CLCN3-205ENST00000506924 RPP30P78346 268 aaKnown RBP7.1□□□□□ -1.27
CLCN3-205ENST00000506924 GAMTQ14353 236 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms