RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 ETFRF1Q6IPR1 90 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 TEX38Q6PEX7 206 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 C19orf35Q6ZS72 473 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 CENPVQ7Z7K6 275 aaPredicted RBP5.61□□□□□ -1.51
NUP54-204ENST00000506098 PRIMA1Q86XR5 153 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 FAM223AQ8IWN6 122 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 KCNRGQ8N5I3 272 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 NECAP1Q8NC96 275 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 BPIFCQ8NFQ6 507 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 OR10P1Q8NGE3 313 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 MYOZ3Q8TDC0 251 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 VN1R17PQ8TDU5 208 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 TAF15Q92804 592 aaKnown RBP eCLIP5.61□□□□□ -1.51
NUP54-204ENST00000506098 PINX1Q96BK5 328 aaKnown RBP5.61□□□□□ -1.51
NUP54-204ENST00000506098 MFFQ9GZY8 342 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 FNDC4Q9H6D8 234 aaPredicted RBP5.61□□□□□ -1.51
NUP54-204ENST00000506098 SMPXQ9UHP9 88 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 ZNF320A2RRD8 509 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 PGPEP1LA6NFU8 196 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 TAAR5O14804 337 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 NDUFB8O95169 186 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 MT-CO2P00403 227 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 PRH1P02810 166 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 TRGV3P03979 118 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 MDKP21741 143 aaPredicted RBP5.6□□□□□ -1.51
NUP54-204ENST00000506098 RHOGP84095 191 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 SRSF2Q01130 221 aaKnown RBP5.6□□□□□ -1.51
NUP54-204ENST00000506098 SLC38A11Q08AI6 406 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 FOXL1Q12952 345 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 OR8G2PQ6IF36 304 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 C10orf99Q6UWK7 81 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 MTURNQ8N3F0 131 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 KLHDC1Q8N7A1 406 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 ZNF491Q8N8L2 437 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 TMEM116Q8NCL8 245 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 OR1S2Q8NGQ3 325 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 OR5C1Q8NGR4 320 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 WFDC12Q8WWY7 111 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 USMG5Q96IX5 58 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 CXorf58Q96LI9 332 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 CLUHP3Q96NS8 147 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 FBXL7Q9UJT9 491 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 RNF24Q9Y225 148 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 RNF114Q9Y508 228 aa5.6□□□□□ -1.51
NUP54-204ENST00000506098 TRBV7-1A0A0A6YYK4 115 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 A0A0G2JLM5 398 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 A8MWP6 167 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 OR2J3O76001 311 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 MT-ND4LP03901 98 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 RPLP1P05386 114 aaKnown RBP5.59□□□□□ -1.51
NUP54-204ENST00000506098 PF4V1P10720 104 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 HOXA5P20719 270 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 OPRK1P41145 380 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 CDX1P47902 265 aaPredicted RBP5.59□□□□□ -1.51
NUP54-204ENST00000506098 CAMLGP49069 296 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 FABP9Q0Z7S8 132 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 GAMTQ14353 236 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 MLANAQ16655 118 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 TM4SF20Q53R12 229 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 ZNF343Q6P1L6 599 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 TMUB2Q71RG4 321 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 TCF24Q7RTU0 167 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 TMEM144Q7Z5S9 345 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 ZNF329Q86UD4 541 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 TMEM217Q8N7C4 229 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.59□□□□□ -1.51
NUP54-204ENST00000506098 OR5AU1Q8NGC0 362 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 OR4X1Q8NH49 305 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 ZNF502Q8TBZ5 544 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 UBE2E2Q96LR5 201 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 MS4A10Q96PG2 267 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 TMEM147Q9BVK8 224 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 KLK15Q9H2R5 256 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 WFDC1Q9HC57 220 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 NPVFQ9HCQ7 196 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 ZNF355PQ9NSJ1 428 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 FBXL17Q9UF56 701 aa5.59□□□□□ -1.51
NUP54-204ENST00000506098 ATRQ13535 2644 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 A0A1B0GV72 72 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 F8W735 103 aaPredicted RBP5.58□□□□□ -1.52
NUP54-204ENST00000506098 BCL2L11O43521 198 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 DFFBO76075 338 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 MFAP4P55083 255 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 ELLP55199 621 aaPredicted RBP5.58□□□□□ -1.52
NUP54-204ENST00000506098 TPPP2P59282 170 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 RUNX1Q01196 453 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 ATP5G2Q06055 141 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 SLAQ13239 276 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 PEA15Q15121 130 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 C15orf32Q32M92 178 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 KRTAP24-1Q3LI83 254 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 TCTEX1D4Q5JR98 221 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 EIF5AL1Q6IS14 154 aaKnown RBP5.58□□□□□ -1.52
NUP54-204ENST00000506098 TREML4Q6UXN2 200 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 THAP8Q8NA92 274 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 OR4X2Q8NGF9 303 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 EEF1AKMT3Q96AZ1 226 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 SLC35E1Q96K37 410 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 PACRGQ96M98 296 aaPredicted RBP5.58□□□□□ -1.52
NUP54-204ENST00000506098 ATP5SQ99766 215 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms