RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 CIB3Q96Q77 187 aaPredicted RBP10.52□□□□□ -0.73
HOXC9-202ENST00000504557 C20orf85Q9H1P6 137 aa10.52□□□□□ -0.73
HOXC9-202ENST00000504557 A0A0J9YWU9 116 aa10.51□□□□□ -0.73
HOXC9-202ENST00000504557 SMCO3A2RU48 225 aa10.51□□□□□ -0.73
HOXC9-202ENST00000504557 GPX4P36969 197 aaPredicted RBP10.51□□□□□ -0.73
HOXC9-202ENST00000504557 EIF2B2P49770 351 aaKnown RBP10.51□□□□□ -0.73
HOXC9-202ENST00000504557 C16orf54Q6UWD8 224 aa10.51□□□□□ -0.73
HOXC9-202ENST00000504557 PPP1R14BQ96C90 147 aa10.51□□□□□ -0.73
HOXC9-202ENST00000504557 GSKIPQ9P0R6 139 aa10.51□□□□□ -0.73
HOXC9-202ENST00000504557 IGKV1D-37A0A075B6S9 117 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 KIR2DL5BA0A0G2JN68 375 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 KIR2DL5BA0A0G2JPC4 375 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 HELTA6NFD8 242 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 KNCNA6PVL3 124 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 K7EQG2 157 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 UBE2CO00762 179 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 CCSO14618 274 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 CA1P00915 261 aaPredicted RBP10.5□□□□□ -0.73
HOXC9-202ENST00000504557 NKX2-1P43699 371 aaPredicted RBP10.5□□□□□ -0.73
HOXC9-202ENST00000504557 ATP5IP56385 69 aaPredicted RBP10.5□□□□□ -0.73
HOXC9-202ENST00000504557 AKR1C1Q04828 323 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 PMS2P11Q13670 270 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 OR8G2PQ6IF36 304 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 GSG1LQ6UXU4 331 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 Q6ZWC4 215 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 STHQ8IWL8 128 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 KIR2DL5AQ8N109 375 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 KIR2DL5BQ8NHK3 375 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 GLMPQ8WWB7 406 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 CSTL1Q9H114 145 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 PSENENQ9NZ42 101 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 STRAPQ9Y3F4 350 aaKnown RBP10.5□□□□□ -0.73
HOXC9-202ENST00000504557 U3KQE9 123 aa10.5□□□□□ -0.73
HOXC9-202ENST00000504557 FAM25EA8MYX2 175 aa10.49□□□□□ -0.73
HOXC9-202ENST00000504557 TCRBP04435 133 aa10.49□□□□□ -0.73
HOXC9-202ENST00000504557 IAH1Q2TAA2 248 aaPredicted RBP10.49□□□□□ -0.73
HOXC9-202ENST00000504557 CNPY1Q3B7I2 92 aa10.49□□□□□ -0.73
HOXC9-202ENST00000504557 PSMG4Q5JS54 123 aa10.49□□□□□ -0.73
HOXC9-202ENST00000504557 SIGLEC15Q6ZMC9 328 aa10.49□□□□□ -0.73
HOXC9-202ENST00000504557 RNF183Q96D59 192 aa10.49□□□□□ -0.73
HOXC9-202ENST00000504557 SEC22CQ9BRL7 303 aa10.49□□□□□ -0.73
HOXC9-202ENST00000504557 NUDT15Q9NV35 164 aa10.49□□□□□ -0.73
HOXC9-202ENST00000504557 TRAV2A0A0B4J234 112 aa10.48□□□□□ -0.73
HOXC9-202ENST00000504557 SNRPGP15A8MWD9 76 aa10.48□□□□□ -0.73
HOXC9-202ENST00000504557 FABP1P07148 127 aa10.48□□□□□ -0.73
HOXC9-202ENST00000504557 RRAS2P62070 204 aaPredicted RBP10.48□□□□□ -0.73
HOXC9-202ENST00000504557 ACTL10Q5JWF8 245 aa10.48□□□□□ -0.73
HOXC9-202ENST00000504557 ACOT7LQ6ZUV0 252 aa10.48□□□□□ -0.73
HOXC9-202ENST00000504557 OR4D5Q8NGN0 318 aa10.48□□□□□ -0.73
HOXC9-202ENST00000504557 IL17DQ8TAD2 202 aa10.48□□□□□ -0.73
HOXC9-202ENST00000504557 DCANP1Q8TF63 244 aa10.48□□□□□ -0.73
HOXC9-202ENST00000504557 IGKV1OR2-108A0A075B7D4 117 aa10.47□□□□□ -0.73
HOXC9-202ENST00000504557 CXorf65A6NEN9 183 aa10.47□□□□□ -0.73
HOXC9-202ENST00000504557 BUB3O43684 328 aa10.47□□□□□ -0.73
HOXC9-202ENST00000504557 CCNKO75909 580 aa10.47□□□□□ -0.73
HOXC9-202ENST00000504557 GATA2P23769 480 aaPredicted RBP10.47□□□□□ -0.73
HOXC9-202ENST00000504557 AP2S1P53680 142 aaPredicted RBP10.47□□□□□ -0.73
HOXC9-202ENST00000504557 EWSR1Q01844 656 aaKnown RBP eCLIP10.47□□□□□ -0.733e-6■■■■□ 20.6
HOXC9-202ENST00000504557 ID3Q02535 119 aa10.47□□□□□ -0.73
HOXC9-202ENST00000504557 ZBTB8BQ8NAP8 495 aaPredicted RBP10.47□□□□□ -0.73
HOXC9-202ENST00000504557 TRGV9Q99603 122 aa10.47□□□□□ -0.73
HOXC9-202ENST00000504557 CCDC32Q9BV29 185 aa10.47□□□□□ -0.73
HOXC9-202ENST00000504557 TP53TG1Q9Y2A0 90 aa10.47□□□□□ -0.73
HOXC9-202ENST00000504557 TENM2Q9NT68 2774 aa10.47□□□□□ -0.73
HOXC9-202ENST00000504557 FAM240BA0A1B0GVZ2 78 aa10.46□□□□□ -0.73
HOXC9-202ENST00000504557 PRSS46E5RG02 174 aa10.46□□□□□ -0.73
HOXC9-202ENST00000504557 METTL15P1P0C7V9 234 aa10.46□□□□□ -0.73
HOXC9-202ENST00000504557 ZNF846Q147U1 533 aa10.46□□□□□ -0.73
HOXC9-202ENST00000504557 MITD1Q8WV92 249 aa10.46□□□□□ -0.73
HOXC9-202ENST00000504557 RARRES2Q99969 163 aa10.46□□□□□ -0.73
HOXC9-202ENST00000504557 SLC25A22Q9H936 323 aa10.46□□□□□ -0.73
HOXC9-202ENST00000504557 NRN1Q9NPD7 142 aa10.46□□□□□ -0.73
HOXC9-202ENST00000504557 PFDN2Q9UHV9 154 aa10.46□□□□□ -0.73
HOXC9-202ENST00000504557 STARD9Q9P2P6 4700 aa10.45□□□□□ -0.74
HOXC9-202ENST00000504557 C5orf51A6NDU8 294 aa10.45□□□□□ -0.74
HOXC9-202ENST00000504557 DEFB4AO15263 64 aa10.45□□□□□ -0.74
HOXC9-202ENST00000504557 H2AFB2P0C5Z0 115 aa10.45□□□□□ -0.74
HOXC9-202ENST00000504557 ORM2P19652 201 aa10.45□□□□□ -0.74
HOXC9-202ENST00000504557 SNRPD3P62318 126 aaKnown RBP10.45□□□□□ -0.74
HOXC9-202ENST00000504557 THAP8Q8NA92 274 aa10.45□□□□□ -0.74
HOXC9-202ENST00000504557 OR1B1Q8NGR6 318 aa10.45□□□□□ -0.74
HOXC9-202ENST00000504557 OR11H2Q8NH07 326 aa10.45□□□□□ -0.74
HOXC9-202ENST00000504557 S100ZQ8WXG8 99 aa10.45□□□□□ -0.74
HOXC9-202ENST00000504557 LINC00052Q96N35 136 aa10.45□□□□□ -0.74
HOXC9-202ENST00000504557 CLEC5AQ9NY25 188 aa10.45□□□□□ -0.74
HOXC9-202ENST00000504557 DOK5Q9P104 306 aa10.45□□□□□ -0.74
HOXC9-202ENST00000504557 RCL1Q9Y2P8 373 aaKnown RBP10.45□□□□□ -0.74
HOXC9-202ENST00000504557 LSM5Q9Y4Y9 91 aaKnown RBP10.45□□□□□ -0.74
HOXC9-202ENST00000504557 CSMD3Q7Z407 3707 aa10.45□□□□□ -0.74
HOXC9-202ENST00000504557 NUP62P37198 522 aaPredicted RBP10.44□□□□□ -0.74
HOXC9-202ENST00000504557 DEFB1P60022 68 aa10.44□□□□□ -0.74
HOXC9-202ENST00000504557 MZT2BQ6NZ67 158 aa10.44□□□□□ -0.74
HOXC9-202ENST00000504557 TMEM182Q6ZP80 229 aaPredicted RBP10.44□□□□□ -0.74
HOXC9-202ENST00000504557 TRPT1Q86TN4 253 aaKnown RBP10.44□□□□□ -0.74
HOXC9-202ENST00000504557 OR8I2Q8N0Y5 310 aa10.44□□□□□ -0.74
HOXC9-202ENST00000504557 BPIFCQ8NFQ6 507 aa10.44□□□□□ -0.74
HOXC9-202ENST00000504557 ZNF431Q8TF32 576 aaPredicted RBP10.44□□□□□ -0.74
HOXC9-202ENST00000504557 SMIM8Q96KF7 97 aa10.44□□□□□ -0.74
HOXC9-202ENST00000504557 RAB40CQ96S21 281 aa10.44□□□□□ -0.74
HOXC9-202ENST00000504557 TBC1D24Q9ULP9 559 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms