RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SLC38A11Q08AI6 406 aa9.02□□□□□ -0.97
PDLIM5-208ENST00000504489 STX12Q86Y82 276 aa9.02□□□□□ -0.97
PDLIM5-208ENST00000504489 GINS3Q9BRX5 216 aa9.02□□□□□ -0.97
PDLIM5-208ENST00000504489 TECRQ9NZ01 308 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-208ENST00000504489 IGHV3OR16-8A0A075B7F1 116 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 TRAV14DV4A0A0A6YYC5 116 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 PSG1P11464 419 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 EDN2P20800 178 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 KRTAP10-11P60412 298 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 HBG1P69891 147 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 HBG2P69892 147 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 ZNF90Q03938 601 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 FGL1Q08830 312 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 ATP6V1FQ16864 119 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 DEFB114Q30KQ6 69 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 Q6ZNX1 250 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 OR2K2Q8NGT1 345 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 THAP6Q8TBB0 222 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 DYNLRB2Q8TF09 96 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 MBD2Q9UBB5 411 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 SMPXQ9UHP9 88 aa9.01□□□□□ -0.97
PDLIM5-208ENST00000504489 IGHV7-4-1A0A0J9YVY3 117 aa9□□□□□ -0.97
PDLIM5-208ENST00000504489 WI2-2373I1.2A0A1W2PRP0 233 aa9□□□□□ -0.97
PDLIM5-208ENST00000504489 SMCO3A2RU48 225 aa9□□□□□ -0.97
PDLIM5-208ENST00000504489 ZNF207O43670 478 aaKnown RBP9□□□□□ -0.97
PDLIM5-208ENST00000504489 CFDP00746 253 aaPredicted RBP9□□□□□ -0.97
PDLIM5-208ENST00000504489 NPPCP23582 126 aa9□□□□□ -0.97
PDLIM5-208ENST00000504489 EWSR1Q01844 656 aaKnown RBP eCLIP9□□□□□ -0.97
PDLIM5-208ENST00000504489 NHLH2Q02577 135 aa9□□□□□ -0.97
PDLIM5-208ENST00000504489 BAXQ07812 192 aa9□□□□□ -0.97
PDLIM5-208ENST00000504489 VWC2Q2TAL6 325 aa9□□□□□ -0.97
PDLIM5-208ENST00000504489 TEPPQ6URK8 271 aa9□□□□□ -0.97
PDLIM5-208ENST00000504489 TMEM217Q8N7C4 229 aa9□□□□□ -0.97
PDLIM5-208ENST00000504489 OR51G1Q8NGK1 321 aa9□□□□□ -0.97
PDLIM5-208ENST00000504489 MLXQ9UH92 298 aa9□□□□□ -0.97
PDLIM5-208ENST00000504489 LSM4Q9Y4Z0 139 aaKnown RBP9□□□□□ -0.97
PDLIM5-208ENST00000504489 IL4P05112 153 aa8.99□□□□□ -0.97
PDLIM5-208ENST00000504489 CRYBB3P26998 211 aa8.99□□□□□ -0.97
PDLIM5-208ENST00000504489 CD300EQ496F6 205 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-208ENST00000504489 LCN12Q6JVE5 192 aa8.99□□□□□ -0.97
PDLIM5-208ENST00000504489 LILRB2Q8N423 598 aa8.99□□□□□ -0.97
PDLIM5-208ENST00000504489 CHAC2Q8WUX2 184 aa8.99□□□□□ -0.97
PDLIM5-208ENST00000504489 RNF125Q96EQ8 232 aa8.99□□□□□ -0.97
PDLIM5-208ENST00000504489 METTL26Q96S19 204 aa8.99□□□□□ -0.97
PDLIM5-208ENST00000504489 TMEM147Q9BVK8 224 aa8.99□□□□□ -0.97
PDLIM5-208ENST00000504489 VSIRQ9H7M9 311 aa8.99□□□□□ -0.97
PDLIM5-208ENST00000504489 UQCC1Q9NVA1 299 aa8.99□□□□□ -0.97
PDLIM5-208ENST00000504489 ZNF256Q9Y2P7 627 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-208ENST00000504489 U3KQE9 123 aa8.99□□□□□ -0.97
PDLIM5-208ENST00000504489 TRAV25A0A0B4J276 109 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 A0A1W2PS18 150 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 IZUMO1RA6ND01 250 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 CHEK1O14757 476 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 RPL12P30050 165 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 BMI1P35226 326 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 SELENOTP62341 195 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 OR2F1Q13607 317 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 USF2Q15853 346 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 Q5BKY6 102 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 BTNL8Q6UX41 500 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 CYP2G1PQ6ZSU1 146 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 BPIFCQ8NFQ6 507 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 OR5C1Q8NGR4 320 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 RHPN1-AS1Q9BWJ2 59 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 WDR83OSQ9Y284 106 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 HSPB11Q9Y547 144 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 FBN3Q75N90 2809 aa8.98□□□□□ -0.97
PDLIM5-208ENST00000504489 DNAH3Q8TD57 4116 aa8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 IGHV3-49A0A0A0MS15 119 aa8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 AGPAT2O15120 278 aa8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 APOHP02749 345 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 CD5P06127 495 aa8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 HNRNPCP07910 306 aaKnown RBP eCLIP8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 RAB31Q13636 194 aa8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 TMEM182Q6ZP80 229 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 TMEM61Q8N0U2 210 aa8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 OR2T35Q8NGX2 323 aa8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 ST8SIA2Q92186 375 aa8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 NARS2Q96I59 477 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 TMEM231Q9H6L2 316 aa8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 RABAC1Q9UI14 185 aa8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 SLC45A2Q9UMX9 530 aa8.97□□□□□ -0.97
PDLIM5-208ENST00000504489 ZNF785A8K8V0 405 aa8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 G3V3Q6 166 aa8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 MPDU1O75352 247 aa8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 GP9P14770 177 aa8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 GATA2P23769 480 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 EIF2B2P49770 351 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 PLP1P60201 277 aa8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 DEFA6Q01524 100 aa8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 FAM90A2PQ658T7 463 aa8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 LAMTOR1Q6IAA8 161 aa8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 ZNF546Q86UE3 836 aa8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 AQP10Q96PS8 301 aa8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 MGST2Q99735 147 aa8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 AURKAIP1Q9NWT8 199 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 PFDN2Q9UHV9 154 aa8.96□□□□□ -0.98
PDLIM5-208ENST00000504489 AGRNO00468 2067 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 IGHV3OR16-13A0A075B7E8 117 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 IGHV3-74A0A0B4J1X5 117 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms