RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 DIAPH2-AS1Q14236 149 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 SPATA12Q7Z6I5 190 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 PFN4Q8NHR9 129 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 PAX4O43316 350 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 EBLN2Q6P2I7 272 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 SCRT2Q9NQ03 307 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 COL4A1P02462 1669 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 CELA2AP08217 269 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 FAM90A2PQ658T7 463 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 SPEM1Q8N4L4 309 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 DCAF4L2Q8NA75 395 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 DEPPQ9NTK1 212 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 TNRC6CQ9HCJ0 1690 aaKnown RBP5.12□□□□□ -1.59
CLCN3-204ENST00000504131 ZNF134P52741 427 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 CCL8P80075 99 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 UFSP1Q6NVU6 142 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 ZIC4Q8N9L1 334 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 IGHV1OR15-9A0A0B4J2B8 117 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 MYBPHLA2RUH7 354 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 EDDM3BP56851 147 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 NANOS2P60321 138 aaKnown RBP5.11□□□□□ -1.59
CLCN3-204ENST00000504131 OSTCQ9NRP0 149 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 TMEM74BQ9NUR3 256 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 ANAPC10Q9UM13 185 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 A0A1W2PNR3 127 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 IGF1P05019 195 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 HOXB4P17483 251 aaPredicted RBP5.11□□□□□ -1.59
CLCN3-204ENST00000504131 VKORC1Q9BQB6 163 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 TXNDC17Q9BRA2 123 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 EFNA2O43921 213 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 GATA1P15976 413 aaPredicted RBP5.11□□□□□ -1.59
CLCN3-204ENST00000504131 CTXN1P60606 82 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 MORN5Q5VZ52 161 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 C2orf48Q96LS8 159 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 MYO18AQ92614 2054 aaKnown RBP5.11□□□□□ -1.59
CLCN3-204ENST00000504131 IZUMO1RA6ND01 250 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 LINC01549A6NIU2 74 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 FAM27E3Q08E93 113 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 CLEC19AQ6UXS0 136 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 LINC00336Q6ZUF6 198 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 TPSG1Q9NRR2 321 aa5.11□□□□□ -1.59
CLCN3-204ENST00000504131 NUPR1O60356 82 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 INSL3P51460 131 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 RSPO2Q6UXX9 243 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-204ENST00000504131 PRIMA1Q86XR5 153 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 DPH3Q96FX2 82 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 SPRY4Q9C004 299 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 CXXC4Q9H2H0 198 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 Q9UF83 564 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 TAF1P21675 1872 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 COX7A2P2O60397 106 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 NPYP01303 97 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 UBE2AP49459 152 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 MNX1P50219 401 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-204ENST00000504131 ADORA2A-AS1P86434 159 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 ZNF441Q8N8Z8 693 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 TM2D1Q9BX74 207 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 Q9H3A6 140 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 GREB1LQ9C091 1923 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-204ENST00000504131 SLX4Q8IY92 1834 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 LINC01553A4QN01 128 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 IGFBP3P17936 291 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-204ENST00000504131 NSUN5P1Q3KNT7 163 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 MS4A13Q5J8X5 152 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 IER5LQ5T953 404 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 FAM222AQ5U5X8 452 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 ZNF706Q9Y5V0 76 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-204ENST00000504131 C1orf105O95561 183 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 ZNF117Q03924 483 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 RPS19BP1Q86WX3 136 aaKnown RBP5.1□□□□□ -1.59
CLCN3-204ENST00000504131 GVQW1Q8N7I0 195 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 ABHD14BQ96IU4 210 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 ANKRD12Q6UB98 2062 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 LOC285556D6RIA3 1793 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 TMEM256-PLSCR3K7ERE1 68 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 PRSS2P07478 247 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 PGFP49763 221 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 LY6DQ14210 128 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 LGALS9CQ6DKI2 356 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 C19orf48Q6RUI8 117 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 AMELYQ99218 206 aa5.1□□□□□ -1.59
CLCN3-204ENST00000504131 OTOFQ9HC10 1997 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 TRAV8-3A0A0A6YYJ7 113 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 CA6P23280 308 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 NOVP48745 357 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 C5orf66Q9H5L9 145 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 CRYGDP07320 174 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 MRPS21P82921 87 aaKnown RBP5.09□□□□□ -1.59
CLCN3-204ENST00000504131 ZNF658BQ4V348 819 aaPredicted RBP5.09□□□□□ -1.59
CLCN3-204ENST00000504131 GUSBP11Q6P575 273 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 PCSK4Q6UW60 755 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 VSIG2Q96IQ7 327 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 KIAA0100Q14667 2235 aaKnown RBP5.09□□□□□ -1.59
CLCN3-204ENST00000504131 SRD5A1P18405 259 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 SFTPA2Q8IWL1 248 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 SFTPA1Q8IWL2 248 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 SLC25A38Q96DW6 304 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 PGLYRP4Q96LB8 373 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 BCL2L10Q9HD36 194 aa5.09□□□□□ -1.59
CLCN3-204ENST00000504131 ZNF355PQ9NSJ1 428 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms