RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 PIP4P1Q86T03 277 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 FAM216BQ8N7L0 139 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 COQ2Q96H96 371 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 IGKV1D-8A0A087WSZ0 117 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 IGHV1-3A0A0C4DH29 117 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 DPM2O94777 84 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 TCRAP04437 139 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 VDAC2P45880 294 aaPredicted RBP3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 FAM90A2PQ658T7 463 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 C11orf42Q8N5U0 333 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 OCC1Q8TAD7 63 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 FAM110DQ8TAY7 271 aaPredicted RBP3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 PLEKHB2Q96CS7 222 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 CYSLTR1Q9Y271 337 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 LY6G6EA0A0G2JKS1 128 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 TMEM89A2RUT3 159 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 RBAKDNA6NC62 111 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 FAM157AC9JC47 383 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 K7EM74 188 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 RHODO00212 210 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 IGKV1D-33P01593 117 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 IGKV1-33P01594 117 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 CSN3P07498 182 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 PFN1P07737 140 aaKnown RBP3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 MGPP08493 103 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 CXCL1P09341 107 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 ATP5G3P48201 142 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 ARF6P62330 175 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 Q0VFX4 171 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 TAL2Q16559 108 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 MST1LQ2TV78 715 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 FBLN7Q53RD9 439 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 TMEM101Q96IK0 257 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 HIST1H2BLQ99880 126 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 SHANK2-AS3Q9BTD1 123 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 C1QTNF4Q9BXJ3 329 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 SIGLEC9Q9Y336 463 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 U3KQA8 63 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 PINLYPA6NC86 204 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 B4DSR2 109 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 BUB1B-PAK6H3BSN5 160 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 SPINK4O60575 86 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 REG1BP48304 166 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 FAM27E3Q08E93 113 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 MGST2Q99735 147 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 PYGO2Q9BRQ0 406 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 FBXL15Q9H469 300 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 PROK2Q9HC23 129 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 NDUFA4L2Q9NRX3 87 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 KLF2Q9Y5W3 355 aaPredicted RBP3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 DOCK8Q8NF50 2099 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 TRAV34A0A0B4J273 112 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 UBE2L6O14933 153 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 NPFFO15130 113 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 SIVA1O15304 175 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 APOHP02749 345 aaPredicted RBP3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 CBLN1P23435 193 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 UBE2E1P51965 193 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 ZNF138P52744 262 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 PLP1P60201 277 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 COL9A2Q14055 689 aaPredicted RBP3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 RRN3P1Q2M238 152 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 ZNF672Q499Z4 452 aaPredicted RBP3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 DTX2Q86UW9 622 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 CD177Q8N6Q3 437 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 ZNF418Q8TF45 676 aaPredicted RBP3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 HILPDAQ9Y5L2 63 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 A0A1W2PPE3 182 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 PSPNO60542 156 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 PAX2Q02962 417 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 PSG3Q16557 428 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 SFTA2Q6UW10 78 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 ZNF48Q96MX3 618 aaPredicted RBP3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 HIST1H4GQ99525 98 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 GEMIN7Q9H840 131 aaKnown RBP3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 CEP192Q8TEP8 1941 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 MED19A0JLT2 244 aaPredicted RBP3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 K7ENP7 123 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 TCF21O43680 179 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 NBL1P41271 181 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 NMUP48645 174 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 PAX8Q06710 450 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 TMEM200BQ69YZ2 307 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 RNF152Q8N8N0 203 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 FGFBP3Q8TAT2 258 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 ORAOV1Q8WV07 137 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 TNFRSF18Q9Y5U5 241 aa3.88□□□□□ -1.79
NDFIP1-202ENST00000503388 ASCC3Q8N3C0 2202 aaKnown RBP3.87□□□□□ -1.79
NDFIP1-202ENST00000503388 IGKV1D-17A0A075B6S4 117 aa3.87□□□□□ -1.79
NDFIP1-202ENST00000503388 TRBV7-9A0A0J9YWB2 115 aa3.87□□□□□ -1.79
NDFIP1-202ENST00000503388 MLNRO43193 412 aa3.87□□□□□ -1.79
NDFIP1-202ENST00000503388 LILRA1O75019 489 aa3.87□□□□□ -1.79
NDFIP1-202ENST00000503388 CA1P00915 261 aaPredicted RBP3.87□□□□□ -1.79
NDFIP1-202ENST00000503388 GPR183P32249 361 aa3.87□□□□□ -1.79
NDFIP1-202ENST00000503388 FOXE3Q13461 319 aa3.87□□□□□ -1.79
NDFIP1-202ENST00000503388 FBXL19-AS1Q494R0 122 aa3.87□□□□□ -1.79
NDFIP1-202ENST00000503388 NIT1Q86X76 327 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms