RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 FUNDC2Q9BWH2 189 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 SAV1Q9H4B6 383 aaPredicted RBP4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 SLC45A2Q9UMX9 530 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 GPR132Q9UNW8 380 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 NACAE9PAV3 2078 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 CRYM-AS1A6NIL9 109 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 KNCNA6PVL3 124 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 M0QYG6 137 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 ISLRO14498 428 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 SOCS3O14543 225 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 CTDSPLO15194 276 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 HPGDSO60760 199 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 RAB3DO95716 219 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 IFNA21P01568 189 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 FABP1P07148 127 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 RD3LP0DJH9 198 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 PSG1P11464 419 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 ID1P41134 155 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 MEOX2P50222 304 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 RND2P52198 227 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 B2MP61769 119 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 SUPT4H1P63272 117 aaKnown RBP4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 ZNF79Q15937 498 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 SPINK9Q5DT21 86 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 SOHLH1Q5JUK2 328 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 GPR107Q5VW38 600 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 STEAP1BQ6NZ63 245 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 SELENOHQ8IZQ5 122 aaKnown RBP4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 OR13C8Q8NGS7 320 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 OR52I2Q8NH67 350 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 TMEM170AQ8WVE7 144 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 RNF125Q96EQ8 232 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 PRRT1Q99946 306 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 NAA60Q9H7X0 242 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 HEYLQ9NQ87 328 aaPredicted RBP4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 DKK2Q9UBU2 259 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 HSPB7Q9UBY9 170 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 CELA1Q9UNI1 258 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 C14orf166Q9Y224 244 aaKnown RBP4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 RFNGQ9Y644 331 aa4.36□□□□□ -1.71
LSM3P4-201ENST00000502948 A0A0B4J2A0 478 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 NXPH3O95157 252 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 IFNA10P01566 189 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 OR5AC1P0C628 307 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 SULT1A3P0DMM9 295 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 SULT1A4P0DMN0 295 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 PI3P19957 117 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 S100A7P31151 101 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 CCR6P51684 374 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 VBP1P61758 197 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 NCS1P62166 190 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 LSM3P62310 102 aaKnown RBP4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 KLF9Q13886 244 aaPredicted RBP4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 CTF1Q16619 201 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 SP6Q3SY56 376 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 C4orf46Q504U0 113 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 ZNF709Q8N972 641 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 C15orf53Q8NAA6 179 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 OR4D5Q8NGN0 318 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 RNASE11Q8TAA1 199 aaKnown RBP4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 LHFPL5Q8TAF8 219 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 MARCH1Q8TCQ1 289 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 SMIM4Q8WVI0 70 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 NPIPB3Q92617 1050 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 SCGB3A2Q96PL1 93 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 NIPSNAP3BQ9BS92 247 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 CLEC5AQ9NY25 188 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 EXTL2Q9UBQ6 330 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 SHPKQ9UHJ6 478 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 KCNIP3Q9Y2W7 256 aa4.35□□□□□ -1.71
LSM3P4-201ENST00000502948 DUXBA0A1W2PPF3 345 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 CEBPZOSA8MTT3 80 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 SNRPGP15A8MWD9 76 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 FAM25AB3EWG3 89 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 FAM25CB3EWG5 89 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 FAM25GB3EWG6 89 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 DISC1C4P0D8 188 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 CDK2AP2O75956 126 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 AKAIN1P0CW23 69 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 SLC25A6P12236 298 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 TSPOP30536 169 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 SRPXP78539 464 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 OR4D10Q8NGI6 311 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 DEDD2Q8WXF8 326 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 GPR146Q96CH1 333 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 GPR82Q96P67 336 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 TRGV9Q99603 122 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 XCL2Q9UBD3 114 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 CACNG5Q9UF02 275 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 GOLT1BQ9Y3E0 138 aa4.34□□□□□ -1.71
LSM3P4-201ENST00000502948 IGKV1D-37A0A075B6S9 117 aa4.33□□□□□ -1.72
LSM3P4-201ENST00000502948 A0A0J9YX75 114 aa4.33□□□□□ -1.72
LSM3P4-201ENST00000502948 LYRM9A8MSI8 78 aa4.33□□□□□ -1.72
LSM3P4-201ENST00000502948 PITX3O75364 302 aa4.33□□□□□ -1.72
LSM3P4-201ENST00000502948 HBE1P02100 147 aa4.33□□□□□ -1.72
LSM3P4-201ENST00000502948 AKR1C4P17516 323 aa4.33□□□□□ -1.72
LSM3P4-201ENST00000502948 BTF3P20290 206 aaKnown RBP4.33□□□□□ -1.72
LSM3P4-201ENST00000502948 PSG9Q00887 426 aa4.33□□□□□ -1.72
LSM3P4-201ENST00000502948 GAMTQ14353 236 aa4.33□□□□□ -1.72
LSM3P4-201ENST00000502948 SMCO1Q147U7 214 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms