RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 UNQ6494/PRO21346Q6UXR6 183 aa13.21□□□□□ -0.29
VCAN-204ENST00000502527 MBD6Q96DN6 1003 aa13.21□□□□□ -0.29
VCAN-204ENST00000502527 SMIM12Q96EX1 92 aa13.21□□□□□ -0.29
VCAN-204ENST00000502527 TIMD4Q96H15 378 aa13.21□□□□□ -0.29
VCAN-204ENST00000502527 GRAMD2BQ96HH9 432 aa13.21□□□□□ -0.29
VCAN-204ENST00000502527 PTPRQQ9UMZ3 2332 aa13.21□□□□□ -0.29
VCAN-204ENST00000502527 MALRD1Q5VYJ5 2156 aa13.21□□□□□ -0.29
VCAN-204ENST00000502527 PGPA6NDG6 321 aa13.2□□□□□ -0.3
VCAN-204ENST00000502527 SNRPCP09234 159 aaKnown RBP13.2□□□□□ -0.3
VCAN-204ENST00000502527 GNG5P63218 68 aa13.2□□□□□ -0.3
VCAN-204ENST00000502527 OR10J3Q5JRS4 329 aa13.2□□□□□ -0.3
VCAN-204ENST00000502527 TPTE2P1Q5T6R2 138 aa13.2□□□□□ -0.3
VCAN-204ENST00000502527 RASL11AQ6T310 242 aa13.2□□□□□ -0.3
VCAN-204ENST00000502527 FAM168AQ92567 244 aa13.2□□□□□ -0.3
VCAN-204ENST00000502527 ZNF331Q9NQX6 463 aaPredicted RBP13.2□□□□□ -0.3
VCAN-204ENST00000502527 ZMAT5Q9UDW3 170 aaKnown RBP13.2□□□□□ -0.3
VCAN-204ENST00000502527 KLF12Q9Y4X4 402 aa13.2□□□□□ -0.3
VCAN-204ENST00000502527 CA1P00915 261 aaPredicted RBP13.2□□□□□ -0.3
VCAN-204ENST00000502527 GP9P14770 177 aa13.2□□□□□ -0.3
VCAN-204ENST00000502527 HTR1DP28221 377 aa13.2□□□□□ -0.3
VCAN-204ENST00000502527 NUDT10Q8NFP7 164 aa13.2□□□□□ -0.3
VCAN-204ENST00000502527 NUDT11Q96G61 164 aa13.2□□□□□ -0.3
VCAN-204ENST00000502527 GNB4Q9HAV0 340 aa13.2□□□□□ -0.3
VCAN-204ENST00000502527 HIGD1AQ9Y241 93 aa13.2□□□□□ -0.3
VCAN-204ENST00000502527 TIMM23O14925 209 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 CNIH1O95406 144 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 IGLC1P0CG04 106 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 HIST1H1EP10412 219 aaKnown RBP13.19□□□□□ -0.3
VCAN-204ENST00000502527 USF2Q15853 346 aaPredicted RBP13.19□□□□□ -0.3
VCAN-204ENST00000502527 OR11H6Q8NGC7 330 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 WIPF2Q8TF74 440 aaPredicted RBP13.19□□□□□ -0.3
VCAN-204ENST00000502527 NDUFAF3Q9BU61 184 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 SSBP3Q9BWW4 388 aaPredicted RBP13.19□□□□□ -0.3
VCAN-204ENST00000502527 SAMD10Q9BYL1 202 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 I3L2K1 104 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 BRS3P32247 399 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 ADORA2A-AS1P86434 159 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 Q6ZWC4 215 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 LHFPL4Q7Z7J7 247 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 C5orf17Q8NAS9 161 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 HSPB9Q9BQS6 159 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 ATG101Q9BSB4 218 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 WNT10AQ9GZT5 417 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 GSX1Q9H4S2 264 aaPredicted RBP13.19□□□□□ -0.3
VCAN-204ENST00000502527 DPM3Q9P2X0 92 aa13.19□□□□□ -0.3
VCAN-204ENST00000502527 F2Z2F3 143 aa13.18□□□□□ -0.3
VCAN-204ENST00000502527 APCSP02743 223 aa13.18□□□□□ -0.3
VCAN-204ENST00000502527 PSG1P11464 419 aa13.18□□□□□ -0.3
VCAN-204ENST00000502527 CEACAM3P40198 252 aa13.18□□□□□ -0.3
VCAN-204ENST00000502527 MMDQ15546 238 aa13.18□□□□□ -0.3
VCAN-204ENST00000502527 PRR27Q6MZM9 219 aa13.18□□□□□ -0.3
VCAN-204ENST00000502527 GPR82Q96P67 336 aa13.18□□□□□ -0.3
VCAN-204ENST00000502527 CBLN4Q9NTU7 201 aa13.18□□□□□ -0.3
VCAN-204ENST00000502527 RAXQ9Y2V3 346 aa13.18□□□□□ -0.3
VCAN-204ENST00000502527 PLXNB1O43157 2135 aa13.18□□□□□ -0.3
VCAN-204ENST00000502527 ZNF705FA8MVS1 300 aaPredicted RBP13.17□□□□□ -0.3
VCAN-204ENST00000502527 BMPR1BO00238 502 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 ZNF705DP0CH99 300 aaPredicted RBP13.17□□□□□ -0.3
VCAN-204ENST00000502527 ZNF705BP0CI00 300 aaPredicted RBP13.17□□□□□ -0.3
VCAN-204ENST00000502527 LYZP61626 148 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 ARF6P62330 175 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 KIAA1644Q3SXP7 199 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 C1orf194Q5T5A4 169 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 SIGLECL1Q8N7X8 197 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 FMC1Q96HJ9 113 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 RASL11BQ9BPW5 248 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 C7orf69Q9H7B7 122 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 POLR3KQ9Y2Y1 108 aaPredicted RBP13.17□□□□□ -0.3
VCAN-204ENST00000502527 ANKHD1Q8IWZ3 2542 aaKnown RBP13.17□□□□□ -0.3
VCAN-204ENST00000502527 LY6HO94772 140 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 CDSNQ15517 529 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 LDLRAD2Q5SZI1 272 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 ZNF600Q6ZNG1 722 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 TSKUQ8WUA8 353 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 TMEM14CQ9P0S9 112 aa13.17□□□□□ -0.3
VCAN-204ENST00000502527 M0R1W7 72 aa13.16□□□□□ -0.3
VCAN-204ENST00000502527 NBR2O15453 112 aa13.16□□□□□ -0.3
VCAN-204ENST00000502527 TOMM40O96008 361 aa13.16□□□□□ -0.3
VCAN-204ENST00000502527 LEMD1Q68G75 181 aa13.16□□□□□ -0.3
VCAN-204ENST00000502527 NUP35Q8NFH5 326 aa13.16□□□□□ -0.3
VCAN-204ENST00000502527 NEU4Q8WWR8 484 aaPredicted RBP13.16□□□□□ -0.3
VCAN-204ENST00000502527 TBX15Q96SF7 602 aa13.16□□□□□ -0.3
VCAN-204ENST00000502527 Q9H3A6 140 aa13.16□□□□□ -0.3
VCAN-204ENST00000502527 RPH3ALQ9UNE2 315 aa13.16□□□□□ -0.3
VCAN-204ENST00000502527 LOC105371242A0A075B767 164 aa13.16□□□□□ -0.3
VCAN-204ENST00000502527 ZNF253O75346 499 aa13.16□□□□□ -0.3
VCAN-204ENST00000502527 SRIP30626 198 aa13.16□□□□□ -0.3
VCAN-204ENST00000502527 LBHQ53QV2 105 aaPredicted RBP13.16□□□□□ -0.3
VCAN-204ENST00000502527 ASPHD1Q5U4P2 390 aa13.16□□□□□ -0.3
VCAN-204ENST00000502527 MLST8Q9BVC4 326 aa13.16□□□□□ -0.3
VCAN-204ENST00000502527 TCRAP04437 139 aa13.15□□□□□ -0.3
VCAN-204ENST00000502527 GPX1P07203 203 aa13.15□□□□□ -0.3
VCAN-204ENST00000502527 NPBQ8NG41 125 aa13.15□□□□□ -0.3
VCAN-204ENST00000502527 TMEM68Q96MH6 324 aa13.15□□□□□ -0.3
VCAN-204ENST00000502527 SLC25A39Q9BZJ4 359 aaPredicted RBP13.15□□□□□ -0.3
VCAN-204ENST00000502527 HILPDAQ9Y5L2 63 aa13.15□□□□□ -0.3
VCAN-204ENST00000502527 KIR2DL5BA0A0G2JN68 375 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 KIR2DL5BA0A0G2JPC4 375 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 LTAP01374 205 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 C11orf71Q6IPW1 123 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms