RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 JPT1Q9UK76 154 aa4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 MPC1Q9Y5U8 109 aa4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 AGRNO00468 2067 aa4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 SAA2-SAA4A0A096LPE2 208 aa4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 FCGR3BO75015 233 aa4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 OR10J4P0C629 311 aa4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 FOXA3P55318 350 aaPredicted RBP4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 B3GALT5-AS1P59052 145 aa4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 TIGITQ495A1 244 aa4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 MRAP2Q96G30 205 aa4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 CCDC140Q96MF4 163 aa4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 SPANXB1Q9NS25 103 aaPredicted RBP4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 JKAMPQ9P055 326 aa4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 UFC1Q9Y3C8 167 aa4.74□□□□□ -1.65
SOX2-OT-218ENST00000498731 TMPRSS2O15393 492 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 FOXH1O75593 365 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 OR7C1O76099 320 aaPredicted RBP4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 NHLRC4P0CG21 123 aaPredicted RBP4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 SCGB1A1P11684 91 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 USF1P22415 310 aaPredicted RBP4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 HTR1DP28221 377 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 RHOBP62745 196 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 LCNL1Q6ZST4 164 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 TPRX1Q8N7U7 411 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 C1QTNF5Q9BXJ0 243 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 LINC00470Q9BZP3 86 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 ST20Q9HBF5 79 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 PSENENQ9NZ42 101 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 IL36RNQ9UBH0 155 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 CACNG5Q9UF02 275 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 RABAC1Q9UI14 185 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 FZR1Q9UM11 496 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 ABCA12Q86UK0 2595 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 IGKV1-6A0A0C4DH72 117 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 LRP5LA4QPB2 252 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 PDE6DO43924 150 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 XGP55808 180 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 TET2Q6N021 2002 aaPredicted RBP4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 OSR1Q8TAX0 266 aaPredicted RBP4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 WIPF2Q8TF74 440 aaPredicted RBP4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 SPATA25Q9BR10 227 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 NDFIP1Q9BT67 221 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 ZNF442Q9H7R0 627 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 IL36GQ9NZH8 169 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 CSDC2Q9Y534 153 aaKnown RBP4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 A0A1W2PPM0 123 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 PSMB11A5LHX3 300 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 FAM90A10PA6NDY2 464 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 IFNA1P01562 189 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 IGKV1-5P01602 117 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 PRB4P10163 310 aaPredicted RBP4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 PRTN3P24158 256 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 LINC00205P59089 165 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 PCBD1P61457 104 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 HERV-K104P61576 105 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 TCTEX1D4Q5JR98 221 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 Q96M66 194 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 C1RLQ9NZP8 487 aa4.73□□□□□ -1.65
SOX2-OT-218ENST00000498731 MYO9AB2RTY4 2548 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 CCDC179H3BU77 68 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 NGFP01138 241 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 FGF6P10767 208 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 VDAC2P45880 294 aaPredicted RBP4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 TMEM97Q5BJF2 176 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 FAM27BQ5VT28 67 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 OR2H1Q9GZK4 316 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 ARFGEF3Q5TH69 2177 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 ANKRD30BLA7E2S9 258 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 NPIPB5A8MRT5 1133 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 J3QR06 171 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 ISLRO14498 428 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 HSBP1O75506 76 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 DHRS3O75911 302 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 HIST1H1EP10412 219 aaKnown RBP4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 CRYBB3P26998 211 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 FXYD7P58549 80 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 TNP2Q05952 138 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 DIAPH2-AS1Q14236 149 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 OR10J3Q5JRS4 329 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 ZADH2Q8N4Q0 377 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 OR52E5Q8NH55 327 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 TMEM54Q969K7 222 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 SNRNP40Q96DI7 357 aaKnown RBP4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 KIR2DL4Q99706 377 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 OR2D2Q9H210 308 aa4.72□□□□□ -1.65
SOX2-OT-218ENST00000498731 IGHV1-24A0A0C4DH33 117 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 CTXND1A0A1B0GTU2 59 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 H3BMG7 143 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 SYS1-DBNDD2H3BUS1 97 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 ARL14EPLP0DKL9 152 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 BCL3P20749 454 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 EDDM3BP56851 147 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 RPL31P62899 125 aaKnown RBP4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 SLC38A11Q08AI6 406 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 C20orf204Q6ZNR8 217 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 GTF2H5Q6ZYL4 71 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 NABP1Q96AH0 204 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 LINC00479Q96M42 142 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 PSMG3Q9BT73 122 aaPredicted RBP4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 TM2D2Q9BX73 214 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms