RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 USF3Q68DE3 2245 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 CMYA5Q8N3K9 4069 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 UBE2L5PA0A1B0GUS4 154 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 SMCO3A2RU48 225 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 BTBD17A6NE02 478 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 C5orf52A6NGY3 159 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 NCBP2LA6PVI3 153 aaKnown RBP4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 COLCA2A8K830 154 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 CYB5BO43169 146 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 EIF3GO75821 320 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 HBE1P02100 147 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 CD5P06127 495 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 OR13C7P0DN81 318 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 RNASE2P10153 161 aaKnown RBP4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 MYOD1P15172 320 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 FGF7P21781 194 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 CNTFRP26992 372 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 SAA4P35542 130 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 RUNX1Q01196 453 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 ZNF616Q08AN1 781 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 C5orf64Q2M2E5 130 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 BSXQ3C1V8 233 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 ETFRF1Q6IPR1 90 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 TMEM88Q6PEY1 159 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 BTNL8Q6UX41 500 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 Q6ZRG5 221 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 CENPVQ7Z7K6 275 aaPredicted RBP4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 CBLN2Q8IUK8 224 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 C3orf56Q8N813 242 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 OR10W1Q8NGF6 305 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 RNASEH2CQ8TDP1 164 aaKnown RBP4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 RXFP4Q8TDU9 374 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 CACNG8Q8WXS5 425 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 RPL36ALQ969Q0 106 aaKnown RBP4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 RITA1Q96K30 269 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 SLC35E1Q96K37 410 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 RASL11BQ9BPW5 248 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 SH3BGRL3Q9H299 93 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 FBXL15Q9H469 300 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 HIF1ANQ9NWT6 349 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 ZNF580Q9UK33 172 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 WDR83OSQ9Y284 106 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 FAM96BQ9Y3D0 163 aa4.19□□□□□ -1.74
HMGXB4-208ENST00000498325 VWFP04275 2813 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 WNK1Q9H4A3 2382 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 TRAV40A0A0B4J280 105 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 A0A1B0GW64 132 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 PRSS46E5RG02 174 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 TGFAP01135 160 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 FBP1P09467 338 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 SFTA3P0C7M3 94 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 SRD5A1P18405 259 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 MDKP21741 143 aaPredicted RBP4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 CD24P25063 80 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 OPRK1P41145 380 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 NPBWR1P48145 328 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 GNB1P62873 340 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 AKR1C1Q04828 323 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 FXYD3Q14802 87 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 RHEBQ15382 184 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 MRGPRG-AS1Q2M3A8 158 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 ACOT6Q3I5F7 207 aaPredicted RBP4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 TMEM41BQ5BJD5 291 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 CYB5R2Q6BCY4 276 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 ZNF562Q6V9R5 426 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 TMEM144Q7Z5S9 345 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 DYNAPQ8N1N2 210 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 TEX29Q8N6K0 151 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 Q8N6K4 173 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 ZNF114Q8NC26 417 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 LFNGQ8NES3 379 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 LYPD6BQ8NI32 183 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 FAM213BQ8TBF2 198 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 ABHD5Q8WTS1 349 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 TMEM170AQ8WVE7 144 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 SRSF12Q8WXF0 261 aaKnown RBP4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 C22orf15Q8WYQ4 148 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 RBMXL1Q96E39 390 aaKnown RBP4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 P2RX4Q99571 388 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 RSG1Q9BU20 258 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 PBDC1Q9BVG4 233 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 HRH4Q9H3N8 390 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 GSN-AS1Q9NRJ2 163 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 TMEM160Q9NX00 188 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 PITPNC1Q9UKF7 332 aa4.18□□□□□ -1.74
HMGXB4-208ENST00000498325 TET2Q6N021 2002 aaPredicted RBP4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 ARHGAP32A7KAX9 2087 aa4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 IGHV3OR16-10A0A075B7F0 116 aa4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 A0A096LNT2 108 aa4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 A0A1W2PPV4 95 aa4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 IGLC7A0M8Q6 106 aa4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 E7EUB6 86 aa4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 AP4M1O00189 453 aa4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 FCN1O00602 326 aa4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 TGOLN2O43493 480 aa4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 DEFA4P12838 97 aa4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 RPL29P47914 159 aaKnown RBP4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 SNRPEP62304 92 aaKnown RBP4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 WT1-ASQ06250 92 aa4.17□□□□□ -1.74
HMGXB4-208ENST00000498325 TMEM249Q2WGJ8 235 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms