RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 C21orf62Q9NYP8 219 aa12.47□□□□□ -0.41
C4A-259ENST00000498271 ERG28Q9UKR5 140 aa12.47□□□□□ -0.41
C4A-259ENST00000498271 SMAD7O15105 426 aaKnown RBP12.47□□□□□ -0.41
C4A-259ENST00000498271 OR13C6PQ8NH95 151 aa12.47□□□□□ -0.41
C4A-259ENST00000498271 RAMP3O60896 148 aa12.47□□□□□ -0.41
C4A-259ENST00000498271 DUTP33316 252 aaKnown RBP12.47□□□□□ -0.41
C4A-259ENST00000498271 TGFAP01135 160 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 RNASE1P07998 156 aaKnown RBP12.46□□□□□ -0.41
C4A-259ENST00000498271 CECR9P0C854 216 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 SAA1P0DJI8 122 aaPredicted RBP12.46□□□□□ -0.41
C4A-259ENST00000498271 PLAURQ03405 335 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 ANAPC1Q9H1A4 1944 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 MUC21A0A0G2JKD1 596 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 MUC21A0A140T8X8 626 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 A0A1B0GWJ7 208 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 CRYGSP22914 178 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 MUC21Q5SSG8 566 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 FOXA2Q9Y261 457 aaPredicted RBP12.46□□□□□ -0.41
C4A-259ENST00000498271 A0A087X0K7 114 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 MORN2Q502X0 79 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 RNF182Q8N6D2 247 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 ARPC1AQ92747 370 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 SPANXDQ9BXN6 97 aa12.46□□□□□ -0.41
C4A-259ENST00000498271 MDC1Q14676 2089 aaKnown RBP12.46□□□□□ -0.41
C4A-259ENST00000498271 RRN3P1Q2M238 152 aa12.46□□□□□ -0.42
C4A-259ENST00000498271 NABP1Q96AH0 204 aa12.46□□□□□ -0.42
C4A-259ENST00000498271 SCN8AQ9UQD0 1980 aa12.46□□□□□ -0.42
C4A-259ENST00000498271 TRBV6-6A0A0A6YYG2 114 aa12.46□□□□□ -0.42
C4A-259ENST00000498271 TRAV5A0A0B4J249 113 aa12.46□□□□□ -0.42
C4A-259ENST00000498271 PINLYPA6NC86 204 aa12.46□□□□□ -0.42
C4A-259ENST00000498271 PSG7Q13046 419 aa12.46□□□□□ -0.42
C4A-259ENST00000498271 FGFBP3Q8TAT2 258 aa12.46□□□□□ -0.42
C4A-259ENST00000498271 hDV102S1A0JD36 115 aa12.45□□□□□ -0.42
C4A-259ENST00000498271 IGHV4-39P01824 125 aa12.45□□□□□ -0.42
C4A-259ENST00000498271 APOBEC3AP31941 199 aaPredicted RBP12.45□□□□□ -0.42
C4A-259ENST00000498271 FAM168AQ92567 244 aa12.45□□□□□ -0.42
C4A-259ENST00000498271 C9JQL5 133 aa12.45□□□□□ -0.42
C4A-259ENST00000498271 CELA3BP08861 270 aa12.45□□□□□ -0.42
C4A-259ENST00000498271 PYYP10082 97 aa12.45□□□□□ -0.42
C4A-259ENST00000498271 IGHV1-2P23083 117 aa12.45□□□□□ -0.42
C4A-259ENST00000498271 TMEM101Q96IK0 257 aa12.45□□□□□ -0.42
C4A-259ENST00000498271 C11orf68Q9H3H3 251 aaKnown RBP12.45□□□□□ -0.42
C4A-259ENST00000498271 FRMPD3Q5JV73 1810 aa12.45□□□□□ -0.42
C4A-259ENST00000498271 DCTN5Q9BTE1 182 aa12.45□□□□□ -0.42
C4A-259ENST00000498271 LCN12Q6JVE5 192 aa12.45□□□□□ -0.42
C4A-259ENST00000498271 C8orf46Q8TAG6 207 aa12.45□□□□□ -0.42
C4A-259ENST00000498271 MRPL20Q9BYC9 149 aaKnown RBP12.45□□□□□ -0.42
C4A-259ENST00000498271 SAA2-SAA4A0A096LPE2 208 aa12.44□□□□□ -0.42
C4A-259ENST00000498271 SAA2P0DJI9 122 aaPredicted RBP12.44□□□□□ -0.42
C4A-259ENST00000498271 IFI27P40305 119 aaPredicted RBP12.44□□□□□ -0.42
C4A-259ENST00000498271 LAGE3Q14657 143 aa12.44□□□□□ -0.42
C4A-259ENST00000498271 CNTFRP26992 372 aa12.44□□□□□ -0.42
C4A-259ENST00000498271 PLXNA4Q9HCM2 1894 aa12.44□□□□□ -0.42
C4A-259ENST00000498271 TMEM238C9JI98 176 aa12.44□□□□□ -0.42
C4A-259ENST00000498271 E9PLN8 166 aa12.44□□□□□ -0.42
C4A-259ENST00000498271 SPINK8P0C7L1 97 aa12.44□□□□□ -0.42
C4A-259ENST00000498271 MGST2Q99735 147 aa12.44□□□□□ -0.42
C4A-259ENST00000498271 MED12Q93074 2177 aa12.44□□□□□ -0.42
C4A-259ENST00000498271 NUP35Q8NFH5 326 aa12.44□□□□□ -0.42
C4A-259ENST00000498271 FNDC10F2Z333 226 aa12.43□□□□□ -0.42
C4A-259ENST00000498271 GGNQ86UU5 652 aa12.43□□□□□ -0.42
C4A-259ENST00000498271 SRSF6Q13247 344 aaKnown RBP12.43□□□□□ -0.42
C4A-259ENST00000498271 DNAJC13O75165 2243 aa12.43□□□□□ -0.42
C4A-259ENST00000498271 NPSP0C0P6 89 aa12.43□□□□□ -0.42
C4A-259ENST00000498271 GFRA4Q9GZZ7 299 aa12.43□□□□□ -0.42
C4A-259ENST00000498271 PNRC2Q9NPJ4 139 aaKnown RBP12.43□□□□□ -0.42
C4A-259ENST00000498271 PLXNA2O75051 1894 aa12.43□□□□□ -0.42
C4A-259ENST00000498271 IGLC2P0DOY2 106 aa12.43□□□□□ -0.42
C4A-259ENST00000498271 IGLC3P0DOY3 106 aa12.43□□□□□ -0.42
C4A-259ENST00000498271 ADAMTSL5Q6ZMM2 481 aa12.43□□□□□ -0.42
C4A-259ENST00000498271 C20orf204Q6ZNR8 217 aa12.43□□□□□ -0.42
C4A-259ENST00000498271 SLC25A39Q9BZJ4 359 aaPredicted RBP12.43□□□□□ -0.42
C4A-259ENST00000498271 IGKV3D-15A0A087WSY6 115 aa12.42□□□□□ -0.42
C4A-259ENST00000498271 IGKV1-12A0A0C4DH73 117 aa12.42□□□□□ -0.42
C4A-259ENST00000498271 TRBV7-9A0A0J9YWB2 115 aa12.42□□□□□ -0.42
C4A-259ENST00000498271 IGKV1D-12P01611 117 aa12.42□□□□□ -0.42
C4A-259ENST00000498271 IGKV3-15P01624 115 aa12.42□□□□□ -0.42
C4A-259ENST00000498271 RNF125Q96EQ8 232 aa12.42□□□□□ -0.42
C4A-259ENST00000498271 DPM3Q9P2X0 92 aa12.42□□□□□ -0.42
C4A-259ENST00000498271 IGKV1-5P01602 117 aa12.42□□□□□ -0.42
C4A-259ENST00000498271 HGFACQ04756 655 aa12.42□□□□□ -0.42
C4A-259ENST00000498271 FBXL15Q9H469 300 aa12.42□□□□□ -0.42
C4A-259ENST00000498271 FBXL7Q9UJT9 491 aa12.42□□□□□ -0.42
C4A-259ENST00000498271 EP300Q09472 2414 aaPredicted RBP12.42□□□□□ -0.42
C4A-259ENST00000498271 TP53BP1Q12888 1972 aaPredicted RBP12.42□□□□□ -0.42
C4A-259ENST00000498271 LOC105371242A0A075B767 164 aa12.41□□□□□ -0.42
C4A-259ENST00000498271 IGHV2OR16-5A0A0B4J2B6 119 aa12.41□□□□□ -0.42
C4A-259ENST00000498271 C5orf63A6NC05 138 aa12.41□□□□□ -0.42
C4A-259ENST00000498271 SLC25A15Q9Y619 301 aa12.41□□□□□ -0.42
C4A-259ENST00000498271 YPEL3P61236 119 aaPredicted RBP12.41□□□□□ -0.42
C4A-259ENST00000498271 PSG3Q16557 428 aa12.41□□□□□ -0.42
C4A-259ENST00000498271 RNF144BQ7Z419 303 aa12.41□□□□□ -0.42
C4A-259ENST00000498271 TANC1Q9C0D5 1861 aa12.41□□□□□ -0.42
C4A-259ENST00000498271 SFTA2Q6UW10 78 aa12.4□□□□□ -0.42
C4A-259ENST00000498271 TRAV2A0A0B4J234 112 aa12.4□□□□□ -0.42
C4A-259ENST00000498271 GTSCR1Q86UQ5 136 aa12.4□□□□□ -0.42
C4A-259ENST00000498271 SSC4DQ8WTU2 575 aa12.4□□□□□ -0.42
C4A-259ENST00000498271 TRAV21A0A0B4J279 112 aa12.4□□□□□ -0.42
C4A-259ENST00000498271 C9orf118A6NHY6 69 aa12.4□□□□□ -0.42
C4A-259ENST00000498271 CENPVQ7Z7K6 275 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms