RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 JOSD2Q8TAC2 188 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 TNFAIP8L1Q8WVP5 186 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 MUCL1Q96DR8 90 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 ACY3Q96HD9 319 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 PYURFQ96I23 114 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 PEBP4Q96S96 227 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 MRPL20Q9BYC9 149 aaKnown RBP3.04□□□□□ -1.92
SF3B1-212ENST00000496458 FXYD6Q9H0Q3 95 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 PARP11Q9NR21 331 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 TXNL4BQ9NX01 149 aaKnown RBP3.04□□□□□ -1.92
SF3B1-212ENST00000496458 IDI2-AS1Q9NZ38 188 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 RBM12B-AS1Q9P1G2 102 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 NAT8Q9UHE5 227 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 INSIG2Q9Y5U4 225 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 ENPP4Q9Y6X5 453 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 PLXNA3P51805 1871 aa3.04□□□□□ -1.92
SF3B1-212ENST00000496458 SVILO95425 2214 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 A0A1B0GW64 132 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 TRDV1A0A1B0GX56 115 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 IRGMA1A4Y4 181 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 IGSF23A1L1A6 192 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 OR4C46A6NHA9 309 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 ZNF705GA8MUZ8 300 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-212ENST00000496458 K7EQS6 105 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 SLC17A3O00476 420 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 PIRO00625 290 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 ANGPTL7O43827 346 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 PDE6DO43924 150 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 S1PR2O95136 353 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 UBL3O95164 117 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 GPR75O95800 540 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 OR4A8P0C604 315 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 OR4Q2P0C623 313 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 ESDP10768 282 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 TPT1P13693 172 aaKnown RBP3.03□□□□□ -1.92
SF3B1-212ENST00000496458 OMGP23515 440 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 SNCAP37840 140 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 DAPP51397 102 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 PIGPP57054 158 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 DAD1P61803 113 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 SNRPFP62306 86 aaKnown RBP3.03□□□□□ -1.92
SF3B1-212ENST00000496458 RPS24P62847 133 aaKnown RBP3.03□□□□□ -1.92
SF3B1-212ENST00000496458 MEF2CQ06413 473 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-212ENST00000496458 ADIGQ0VDE8 80 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 TMEM183BQ1AE95 376 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 TEX36Q5VZQ5 186 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 RPL22L1Q6P5R6 122 aaKnown RBP3.03□□□□□ -1.92
SF3B1-212ENST00000496458 LYPD2Q6UXB3 125 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 Q6ZSR6 202 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 MDP1Q86V88 176 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 CALHM3Q86XJ0 350 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 DOLPP1Q86YN1 238 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 PCP2Q8IVA1 136 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 SMIM20Q8N5G0 67 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 DRAM1Q8N682 238 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 PLPP5Q8NEB5 264 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 OR5A2Q8NGI9 324 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 THEM6Q8WUY1 208 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 SKA2Q8WVK7 121 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-212ENST00000496458 BMFQ96LC9 184 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 LYSMD1Q96S90 227 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 IMMP2LQ96T52 175 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 ZNF649Q9BS31 505 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 GNB1LQ9BYB4 327 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 ENY2Q9NPA8 101 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 BET1LQ9NYM9 111 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 JPT1Q9UK76 154 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 TNFSF18Q9UNG2 199 aa3.03□□□□□ -1.92
SF3B1-212ENST00000496458 MRPS16Q9Y3D3 137 aaKnown RBP3.03□□□□□ -1.92
SF3B1-212ENST00000496458 CABIN1Q9Y6J0 2220 aa3.03□□□□□ -1.93
SF3B1-212ENST00000496458 TPRP12270 2363 aaKnown RBP3.02□□□□□ -1.93
SF3B1-212ENST00000496458 PTPRDP23468 1912 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 DENND4CQ5VZ89 1909 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 IGHV3-74A0A0B4J1X5 117 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 PLAC8L1A1L4L8 177 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 IFITM5A6NNB3 132 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 CD300LBA8K4G0 201 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 B4DEV8 164 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 EEF1E1-BLOC1S5C9J1V9 151 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 M0R1X1 148 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 EEF1E1O43324 174 aaKnown RBP3.02□□□□□ -1.93
SF3B1-212ENST00000496458 IGKV1-17P01599 117 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 HBZP02008 142 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 TTRP02766 147 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 HLA-DPB1P04440 258 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 TRGC1P0CF51 173 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 IL9P15248 144 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 IL3RAP26951 378 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 TCTAP57738 103 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 SNRPGP62308 76 aaKnown RBP3.02□□□□□ -1.93
SF3B1-212ENST00000496458 SELENOWP63302 87 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 BTG2P78543 158 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 RUNX1Q01196 453 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 PMAIP1Q13794 54 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 CENPWQ5EE01 88 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 SPANXN3Q5MJ09 141 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 FAM222AQ5U5X8 452 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 GLT8D1Q68CQ7 371 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 ZNF615Q8N8J6 731 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 Q8N976 141 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms