RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 LINC00467Q9BRT7 94 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 POPDC3Q9HBV1 291 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 NAT8Q9UHE5 227 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 HSPB8Q9UJY1 196 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 RBM7Q9Y580 266 aaKnown RBP1.89□□□□□ -2.11
CLK1-214ENST00000496205 R4GN34 69 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 DENND4CQ5VZ89 1909 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 PLXND1Q9Y4D7 1925 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 ECM29Q5VYK3 1845 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 NYNRINQ9P2P1 1898 aaKnown RBP1.88□□□□□ -2.11
CLK1-214ENST00000496205 PIK3C2AO00443 1686 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 IGHV3-64A0A075B6Q5 118 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 TRBV10-2A0A0K0K1G8 114 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 H3BT86 120 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 H7C2G1 150 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 TMEM256-PLSCR3K7ERE1 68 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 TPST1O60507 370 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 DPM2O94777 84 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 IGLV3-19P01714 112 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 IGKV1-16P04430 117 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 IFNA4P05014 189 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 METTL15P1P0C7V9 234 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 MPC1LP0DKB6 136 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 RNASE2P10153 161 aaKnown RBP1.88□□□□□ -2.11
CLK1-214ENST00000496205 EVI2AP22794 236 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 RNASE4P34096 147 aaKnown RBP1.88□□□□□ -2.11
CLK1-214ENST00000496205 DYNLT3P51808 116 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 MSMO1Q15800 293 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 SLC35E3Q7Z769 313 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 TCTE3Q8IZS6 198 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 Q8NDZ9 215 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 OR2T10Q8NGZ9 312 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 WFDC5Q8TCV5 224 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 FGF13Q92913 245 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 MAGOHBQ96A72 148 aaKnown RBP1.88□□□□□ -2.11
CLK1-214ENST00000496205 MCEEQ96PE7 176 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 ADAT1Q9BUB4 502 aaKnown RBP1.88□□□□□ -2.11
CLK1-214ENST00000496205 MRPL32Q9BYC8 188 aaKnown RBP1.88□□□□□ -2.11
CLK1-214ENST00000496205 NAT8BQ9UHF3 227 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 HHLA3Q9XRX5 114 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 HSPE1-MOB4S4R3N1 261 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 OVOS2A0A0G2JMS6 1433 aa1.88□□□□□ -2.11
CLK1-214ENST00000496205 ARHGEF11O15085 1522 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 TAF1LQ8IZX4 1826 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 MYH11P35749 1972 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 IGHV1-58A0A0C4DH39 117 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 MDFIC2A0A1B0GVS7 189 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 C11orf86A6NJI1 115 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 RFPL4AA6NLU0 287 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 RFPL4AL1F8VTS6 287 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 GABARAPH6UMI1 98 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 H7BYZ3 331 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 K7EP13 123 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 SDCBPO00560 298 aaPredicted RBP1.87□□□□□ -2.11
CLK1-214ENST00000496205 OR2T1O43869 369 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 HIST1H2BKO60814 126 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 LYZL6O75951 148 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 SOGA1O94964 1423 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 OR2H2O95918 312 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 HIST1H2BJP06899 126 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 HTR1AP08908 422 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 UBBP0CG47 229 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 HLA-EP13747 358 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 FKBP2P26885 142 aaKnown RBP1.87□□□□□ -2.11
CLK1-214ENST00000496205 SDC2P34741 201 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 RPL35P42766 123 aaKnown RBP1.87□□□□□ -2.11
CLK1-214ENST00000496205 EIF2B2P49770 351 aaKnown RBP1.87□□□□□ -2.11
CLK1-214ENST00000496205 INSL3P51460 131 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 KHDC3LQ587J8 217 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 EIF5AL1Q6IS14 154 aaKnown RBP1.87□□□□□ -2.11
CLK1-214ENST00000496205 OR52R1Q8NGF1 315 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 OR5D16Q8NGK9 328 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 STAG3L4Q8TBR4 150 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 DCANP1Q8TF63 244 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 MRPS24Q96EL2 167 aaKnown RBP1.87□□□□□ -2.11
CLK1-214ENST00000496205 CARD19Q96LW7 228 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 OTORQ9NRC9 128 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 MRPL16Q9NX20 251 aaKnown RBP1.87□□□□□ -2.11
CLK1-214ENST00000496205 TRAPPC2LQ9UL33 140 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 HS3ST2Q9Y278 367 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 A2MP01023 1474 aa1.87□□□□□ -2.11
CLK1-214ENST00000496205 IGKV1D-17A0A075B6S4 117 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 A0A096LPI6 279 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 C9JAW5 83 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 G3V3Q6 166 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 NDUFB3O43676 98 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 TNFSF15O95150 251 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 IGKV1-17P01599 117 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 CMPK1P30085 196 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 SUPT4H1P63272 117 aaKnown RBP1.86□□□□□ -2.11
CLK1-214ENST00000496205 HBBP68871 147 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 ZNF90Q03938 601 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 KISS1Q15726 138 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 VMA21Q3ZAQ7 101 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 RPL13AP3Q6NVV1 102 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 HRCT1Q6UXD1 115 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 LINC00304Q8N9R0 145 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 NPCDR1Q9BY65 106 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 NDUFB11Q9NX14 153 aa1.86□□□□□ -2.11
CLK1-214ENST00000496205 HIGD1AQ9Y241 93 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms