RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 CHEK1O14757 476 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 DEDDO75618 318 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 RD3LP0DJH9 198 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 EIF2B2P49770 351 aaKnown RBP12.3□□□□□ -0.44
SF3A1-209ENST00000496189 H2BFSP57053 126 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 LRRC37A5PQ49AS3 106 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 ACOT7LQ6ZUV0 252 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 STX12Q86Y82 276 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 SBSPONQ8IVN8 264 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 GGACTQ9BVM4 153 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 SRD5A3Q9H8P0 318 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 ZFAND3Q9H8U3 227 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 C19orf73Q9NVV2 129 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 PFDN2Q9UHV9 154 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 SMCO3A2RU48 225 aa12.29□□□□□ -0.44
SF3A1-209ENST00000496189 E5RGE8 158 aa12.29□□□□□ -0.44
SF3A1-209ENST00000496189 FNDC10F2Z333 226 aa12.29□□□□□ -0.44
SF3A1-209ENST00000496189 TOMM40O96008 361 aa12.29□□□□□ -0.44
SF3A1-209ENST00000496189 CMC4P56277 68 aaPredicted RBP12.29□□□□□ -0.44
SF3A1-209ENST00000496189 RPL11P62913 178 aaKnown RBP12.29□□□□□ -0.44
SF3A1-209ENST00000496189 DLK1P80370 383 aa12.29□□□□□ -0.44
SF3A1-209ENST00000496189 PPP1R1CQ8WVI7 109 aa12.29□□□□□ -0.44
SF3A1-209ENST00000496189 RNF2Q99496 336 aa12.29□□□□□ -0.44
SF3A1-209ENST00000496189 LYRM2Q9NU23 88 aaPredicted RBP12.29□□□□□ -0.44
SF3A1-209ENST00000496189 IGHV3OR16-13A0A075B7E8 117 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 IGHV3-74A0A0B4J1X5 117 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 PMS2P5A8MQ11 134 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 DNASE2O00115 360 aaPredicted RBP12.28□□□□□ -0.44
SF3A1-209ENST00000496189 CFDP00746 253 aaPredicted RBP12.28□□□□□ -0.44
SF3A1-209ENST00000496189 HBG1P69891 147 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 HBG2P69892 147 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 TMEM144Q7Z5S9 345 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 DEFB125Q8N687 156 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 THAP8Q8NA92 274 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 OR51G1Q8NGK1 321 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 ASB13Q8WXK3 278 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 TRGV9Q99603 122 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 SLC25A31Q9H0C2 315 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 C11orf1Q9H5F2 150 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 NPVFQ9HCQ7 196 aa12.28□□□□□ -0.44
SF3A1-209ENST00000496189 IGKV3-7A0A075B6H7 116 aa12.27□□□□□ -0.45
SF3A1-209ENST00000496189 FAM24AA6NFZ4 105 aa12.27□□□□□ -0.45
SF3A1-209ENST00000496189 IL4P05112 153 aa12.27□□□□□ -0.45
SF3A1-209ENST00000496189 HNRNPCP07910 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
SF3A1-209ENST00000496189 NUP62P37198 522 aaPredicted RBP12.27□□□□□ -0.45
SF3A1-209ENST00000496189 SULT1A1P50225 295 aa12.27□□□□□ -0.45
SF3A1-209ENST00000496189 RRAS2P62070 204 aaPredicted RBP12.27□□□□□ -0.45
SF3A1-209ENST00000496189 TCF24Q7RTU0 167 aa12.27□□□□□ -0.45
SF3A1-209ENST00000496189 ST8SIA2Q92186 375 aa12.27□□□□□ -0.45
SF3A1-209ENST00000496189 SPATA25Q9BR10 227 aa12.27□□□□□ -0.45
SF3A1-209ENST00000496189 CST7O76096 145 aa12.26□□□□□ -0.45
SF3A1-209ENST00000496189 MPC2O95563 127 aa12.26□□□□□ -0.45
SF3A1-209ENST00000496189 PSG1P11464 419 aa12.26□□□□□ -0.45
SF3A1-209ENST00000496189 CRYBB3P26998 211 aa12.26□□□□□ -0.45
SF3A1-209ENST00000496189 S100A11P31949 105 aa12.26□□□□□ -0.45
SF3A1-209ENST00000496189 P2RY1P47900 373 aa12.26□□□□□ -0.45
SF3A1-209ENST00000496189 SLC38A11Q08AI6 406 aa12.26□□□□□ -0.45
SF3A1-209ENST00000496189 FCN2Q15485 313 aa12.26□□□□□ -0.45
SF3A1-209ENST00000496189 TMEM252Q8N6L7 170 aa12.26□□□□□ -0.45
SF3A1-209ENST00000496189 RCHY1Q96PM5 261 aa12.26□□□□□ -0.45
SF3A1-209ENST00000496189 VSIRQ9H7M9 311 aa12.26□□□□□ -0.45
SF3A1-209ENST00000496189 RABAC1Q9UI14 185 aa12.26□□□□□ -0.45
SF3A1-209ENST00000496189 IGKV1D-37A0A075B6S9 117 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 IGHV3-66A0A0C4DH42 116 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 CCNKO75909 580 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 CXCL3P19876 107 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 S100A7P31151 101 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 TFPI2P48307 235 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 AP2S1P53680 142 aaPredicted RBP12.25□□□□□ -0.45
SF3A1-209ENST00000496189 ZNF90Q03938 601 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 HAGHQ16775 308 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 ATP6V1FQ16864 119 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 TEPPQ6URK8 271 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 LILRB2Q8N423 598 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 TMEM217Q8N7C4 229 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 BPIFCQ8NFQ6 507 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 ZNF414Q96IQ9 312 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 WWC2-AS2Q96NR7 200 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 PBDC1Q9BVG4 233 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 WFDC10AQ9H1F0 79 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 OR5AC2Q9NZP5 309 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 UBQLN2Q9UHD9 624 aa12.25□□□□□ -0.45
SF3A1-209ENST00000496189 HELTA6NFD8 242 aa12.24□□□□□ -0.45
SF3A1-209ENST00000496189 DFFBO76075 338 aa12.24□□□□□ -0.45
SF3A1-209ENST00000496189 SELENOTP62341 195 aa12.24□□□□□ -0.45
SF3A1-209ENST00000496189 FGL1Q08830 312 aa12.24□□□□□ -0.45
SF3A1-209ENST00000496189 RAB31Q13636 194 aa12.24□□□□□ -0.45
SF3A1-209ENST00000496189 GBGT1Q8N5D6 347 aa12.24□□□□□ -0.45
SF3A1-209ENST00000496189 OR11H7Q8NGC8 314 aa12.24□□□□□ -0.45
SF3A1-209ENST00000496189 THAP6Q8TBB0 222 aa12.24□□□□□ -0.45
SF3A1-209ENST00000496189 RNF125Q96EQ8 232 aa12.24□□□□□ -0.45
SF3A1-209ENST00000496189 FAM110AQ9BQ89 295 aa12.24□□□□□ -0.45
SF3A1-209ENST00000496189 UQCC1Q9NVA1 299 aa12.24□□□□□ -0.45
SF3A1-209ENST00000496189 IGKV1OR2-108A0A075B7D4 117 aa12.23□□□□□ -0.45
SF3A1-209ENST00000496189 LOC102724200A0A096LPH7 203 aaPredicted RBP12.23□□□□□ -0.45
SF3A1-209ENST00000496189 IGSF23A1L1A6 192 aa12.23□□□□□ -0.45
SF3A1-209ENST00000496189 APOHP02749 345 aaPredicted RBP12.23□□□□□ -0.45
SF3A1-209ENST00000496189 GIPP09681 153 aaPredicted RBP12.23□□□□□ -0.45
SF3A1-209ENST00000496189 BAXQ07812 192 aa12.23□□□□□ -0.45
SF3A1-209ENST00000496189 ARL16Q0P5N6 197 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms