RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 LINC00052Q96N35 136 aa12.43□□□□□ -0.42
TMEM53-209ENST00000495630 TMED3Q9Y3Q3 217 aa12.43□□□□□ -0.42
TMEM53-209ENST00000495630 CD3DP04234 171 aa12.42□□□□□ -0.42
TMEM53-209ENST00000495630 PSG9Q00887 426 aa12.42□□□□□ -0.42
TMEM53-209ENST00000495630 TMEM88Q6PEY1 159 aa12.42□□□□□ -0.42
TMEM53-209ENST00000495630 OR4B1Q8NGF8 309 aa12.42□□□□□ -0.42
TMEM53-209ENST00000495630 OR51G1Q8NGK1 321 aa12.42□□□□□ -0.42
TMEM53-209ENST00000495630 ABHD1Q96SE0 405 aa12.42□□□□□ -0.42
TMEM53-209ENST00000495630 TMEM222Q9H0R3 208 aa12.42□□□□□ -0.42
TMEM53-209ENST00000495630 CACFD1Q9UGQ2 172 aa12.42□□□□□ -0.42
TMEM53-209ENST00000495630 YTHDF2Q9Y5A9 579 aaKnown RBP12.42□□□□□ -0.42
TMEM53-209ENST00000495630 CEBPZOSA8MTT3 80 aa12.41□□□□□ -0.42
TMEM53-209ENST00000495630 PSMB3P49720 205 aa12.41□□□□□ -0.42
TMEM53-209ENST00000495630 DEFB1P60022 68 aa12.41□□□□□ -0.42
TMEM53-209ENST00000495630 TNP2Q05952 138 aa12.41□□□□□ -0.42
TMEM53-209ENST00000495630 ZNF79Q15937 498 aa12.41□□□□□ -0.42
TMEM53-209ENST00000495630 C1orf158Q8N1D5 194 aa12.41□□□□□ -0.42
TMEM53-209ENST00000495630 OR13C8Q8NGS7 320 aa12.41□□□□□ -0.42
TMEM53-209ENST00000495630 GLYATL2Q8WU03 294 aa12.41□□□□□ -0.42
TMEM53-209ENST00000495630 TMEM170AQ8WVE7 144 aa12.41□□□□□ -0.42
TMEM53-209ENST00000495630 ACY3Q96HD9 319 aa12.41□□□□□ -0.42
TMEM53-209ENST00000495630 C7orf50Q9BRJ6 194 aaKnown RBP12.41□□□□□ -0.42
TMEM53-209ENST00000495630 WDR12Q9GZL7 423 aaKnown RBP12.41□□□□□ -0.42
TMEM53-209ENST00000495630 MTFP1Q9UDX5 166 aa12.41□□□□□ -0.42
TMEM53-209ENST00000495630 HSPG2P98160 4391 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 TEX13DA0A0J9YY54 714 aaPredicted RBP12.4□□□□□ -0.42
TMEM53-209ENST00000495630 LOC102723971A0A1B0GUV8 181 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 HPGDSO60760 199 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 DAD1P61803 113 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 RRN3P1Q2M238 152 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 C1orf194Q5T5A4 169 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 OR8G2PQ6IF36 304 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 EBLN2Q6P2I7 272 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 GSG1LQ6UXU4 331 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 MAPKAPK5-AS1Q8N8E1 139 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 RBPMSQ93062 196 aaKnown RBP12.4□□□□□ -0.42
TMEM53-209ENST00000495630 GPR146Q96CH1 333 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 RNF125Q96EQ8 232 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 SLC35B3Q9H1N7 401 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 CACNG5Q9UF02 275 aa12.4□□□□□ -0.42
TMEM53-209ENST00000495630 OR5AC1P0C628 307 aa12.39□□□□□ -0.43
TMEM53-209ENST00000495630 PAX9P55771 341 aa12.39□□□□□ -0.43
TMEM53-209ENST00000495630 KLF9Q13886 244 aaPredicted RBP12.39□□□□□ -0.43
TMEM53-209ENST00000495630 SELENOHQ8IZQ5 122 aaKnown RBP12.39□□□□□ -0.43
TMEM53-209ENST00000495630 OR52I2Q8NH67 350 aa12.39□□□□□ -0.43
TMEM53-209ENST00000495630 COQ8AQ8NI60 647 aa12.39□□□□□ -0.43
TMEM53-209ENST00000495630 MARCH1Q8TCQ1 289 aa12.39□□□□□ -0.43
TMEM53-209ENST00000495630 ATG101Q9BSB4 218 aa12.39□□□□□ -0.43
TMEM53-209ENST00000495630 SOCS3O14543 225 aa12.38□□□□□ -0.43
TMEM53-209ENST00000495630 ATP6V1G2O95670 118 aa12.38□□□□□ -0.43
TMEM53-209ENST00000495630 ALDH3B2P48448 385 aa12.38□□□□□ -0.43
TMEM53-209ENST00000495630 RORCP51449 518 aa12.38□□□□□ -0.43
TMEM53-209ENST00000495630 SCGB2B2Q4G0G5 96 aa12.38□□□□□ -0.43
TMEM53-209ENST00000495630 NMSQ5H8A3 153 aa12.38□□□□□ -0.43
TMEM53-209ENST00000495630 FAM78BQ5VT40 261 aa12.38□□□□□ -0.43
TMEM53-209ENST00000495630 TMEM229BQ8NBD8 167 aa12.38□□□□□ -0.43
TMEM53-209ENST00000495630 LHFPL5Q8TAF8 219 aa12.38□□□□□ -0.43
TMEM53-209ENST00000495630 PBDC1Q9BVG4 233 aa12.38□□□□□ -0.43
TMEM53-209ENST00000495630 U3KQ87 197 aa12.38□□□□□ -0.43
TMEM53-209ENST00000495630 NBDYA0A0U1RRE5 68 aa12.37□□□□□ -0.43
TMEM53-209ENST00000495630 FAM25AB3EWG3 89 aa12.37□□□□□ -0.43
TMEM53-209ENST00000495630 FAM25CB3EWG5 89 aa12.37□□□□□ -0.43
TMEM53-209ENST00000495630 FAM25GB3EWG6 89 aa12.37□□□□□ -0.43
TMEM53-209ENST00000495630 ISLRO14498 428 aa12.37□□□□□ -0.43
TMEM53-209ENST00000495630 SUPT4H1P63272 117 aaKnown RBP12.37□□□□□ -0.43
TMEM53-209ENST00000495630 RNASE12Q5GAN4 147 aaKnown RBP12.37□□□□□ -0.43
TMEM53-209ENST00000495630 SAMD13Q5VXD3 122 aa12.37□□□□□ -0.43
TMEM53-209ENST00000495630 C6orf223Q8N319 242 aa12.37□□□□□ -0.43
TMEM53-209ENST00000495630 OR4D10Q8NGI6 311 aa12.37□□□□□ -0.43
TMEM53-209ENST00000495630 RTBDNQ9BSG5 229 aaPredicted RBP12.37□□□□□ -0.43
TMEM53-209ENST00000495630 MAGT1Q9H0U3 335 aa12.37□□□□□ -0.43
TMEM53-209ENST00000495630 NACAE9PAV3 2078 aa12.36□□□□□ -0.43
TMEM53-209ENST00000495630 A0A0J9YX75 114 aa12.36□□□□□ -0.43
TMEM53-209ENST00000495630 TNFAIP8O95379 198 aa12.36□□□□□ -0.43
TMEM53-209ENST00000495630 RAB3DO95716 219 aa12.36□□□□□ -0.43
TMEM53-209ENST00000495630 TAS2R19P59542 299 aa12.36□□□□□ -0.43
TMEM53-209ENST00000495630 TMEM268Q5VZI3 342 aa12.36□□□□□ -0.43
TMEM53-209ENST00000495630 MZT2AQ6P582 158 aa12.36□□□□□ -0.43
TMEM53-209ENST00000495630 ZNRF2Q8NHG8 242 aa12.36□□□□□ -0.43
TMEM53-209ENST00000495630 C15orf40Q8WUR7 153 aa12.36□□□□□ -0.43
TMEM53-209ENST00000495630 NAA60Q9H7X0 242 aa12.36□□□□□ -0.43
TMEM53-209ENST00000495630 VCX3AQ9NNX9 186 aa12.36□□□□□ -0.43
TMEM53-209ENST00000495630 C14orf166Q9Y224 244 aaKnown RBP12.36□□□□□ -0.43
TMEM53-209ENST00000495630 ZFP92A6NM28 416 aa12.35□□□□□ -0.43
TMEM53-209ENST00000495630 A8MTW9 85 aa12.35□□□□□ -0.43
TMEM53-209ENST00000495630 SNRPGP15A8MWD9 76 aa12.35□□□□□ -0.43
TMEM53-209ENST00000495630 F6UB75 175 aa12.35□□□□□ -0.43
TMEM53-209ENST00000495630 FABP1P07148 127 aa12.35□□□□□ -0.43
TMEM53-209ENST00000495630 GPX4P36969 197 aaPredicted RBP12.35□□□□□ -0.43
TMEM53-209ENST00000495630 ATP5IP56385 69 aaPredicted RBP12.35□□□□□ -0.43
TMEM53-209ENST00000495630 NCS1P62166 190 aa12.35□□□□□ -0.43
TMEM53-209ENST00000495630 MEF2DQ14814 521 aa12.35□□□□□ -0.43
TMEM53-209ENST00000495630 STEAP1BQ6NZ63 245 aa12.35□□□□□ -0.43
TMEM53-209ENST00000495630 Q8N1X5 172 aa12.35□□□□□ -0.43
TMEM53-209ENST00000495630 IGF2BP2-AS1Q96M15 143 aa12.35□□□□□ -0.43
TMEM53-209ENST00000495630 TMEM208Q9BTX3 173 aa12.35□□□□□ -0.43
TMEM53-209ENST00000495630 RPRMQ9NS64 109 aa12.35□□□□□ -0.43
TMEM53-209ENST00000495630 TMEM56-RWDD3S4R434 201 aa12.35□□□□□ -0.43
TMEM53-209ENST00000495630 LYRM9A8MSI8 78 aa12.34□□□□□ -0.43
TMEM53-209ENST00000495630 SULT1A3P0DMM9 295 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms