RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 SPG11Q96JI7 2443 aa14.8□□□□□ -0.04
TSPAN4-212ENST00000494815 GRIFINA4D1Z8 144 aa14.8□□□□□ -0.04
TSPAN4-212ENST00000494815 WT1-ASQ06250 92 aa14.8□□□□□ -0.04
TSPAN4-212ENST00000494815 TBL2Q9Y4P3 447 aaKnown RBP14.8□□□□□ -0.04
TSPAN4-212ENST00000494815 CXorf1O96002 111 aa14.8□□□□□ -0.04
TSPAN4-212ENST00000494815 UBE2E1P51965 193 aa14.8□□□□□ -0.04
TSPAN4-212ENST00000494815 SUB1P53999 127 aaKnown RBP eCLIP14.8□□□□□ -0.04
TSPAN4-212ENST00000494815 TEPPQ6URK8 271 aa14.8□□□□□ -0.04
TSPAN4-212ENST00000494815 TOMM20LQ6UXN7 152 aa14.8□□□□□ -0.04
TSPAN4-212ENST00000494815 ZNF705AQ6ZN79 300 aaPredicted RBP14.8□□□□□ -0.04
TSPAN4-212ENST00000494815 Q6ZWC4 215 aa14.8□□□□□ -0.04
TSPAN4-212ENST00000494815 RNASE8Q8TDE3 154 aaKnown RBP14.8□□□□□ -0.04
TSPAN4-212ENST00000494815 SCO2A0A1W2PP80 73 aa14.79□□□□□ -0.04
TSPAN4-212ENST00000494815 RPL27AP46776 148 aaKnown RBP14.79□□□□□ -0.04
TSPAN4-212ENST00000494815 COMPP49747 757 aaPredicted RBP14.79□□□□□ -0.04
TSPAN4-212ENST00000494815 LINC00310P59036 64 aa14.79□□□□□ -0.04
TSPAN4-212ENST00000494815 OCC1Q8TAD7 63 aa14.79□□□□□ -0.04
TSPAN4-212ENST00000494815 MGST2Q99735 147 aa14.79□□□□□ -0.04
TSPAN4-212ENST00000494815 LPAR2Q9HBW0 351 aa14.79□□□□□ -0.04
TSPAN4-212ENST00000494815 A0A1W2PRD5 423 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 A0A1W2PRF3 423 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 A0A1W2PRM7 423 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 MOSP00540 346 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 RAB31Q13636 194 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 TNXAQ16473 311 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 CACNG8Q8WXS5 425 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 GGTLC1Q9BX51 225 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 IL36BQ9NZH7 164 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 IGHV4-61A0A0C4DH41 118 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 DSCR9P59020 149 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 RANP62826 216 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 ZNF90Q03938 601 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 C1orf159Q96HA4 380 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 MIEN1Q9BRT3 115 aa14.78□□□□□ -0.04
TSPAN4-212ENST00000494815 ASH1LQ9NR48 2969 aaKnown RBP14.77□□□□□ -0.04
TSPAN4-212ENST00000494815 IGLC7A0M8Q6 106 aa14.77□□□□□ -0.04
TSPAN4-212ENST00000494815 CRISP2P16562 243 aa14.77□□□□□ -0.04
TSPAN4-212ENST00000494815 CBLN1P23435 193 aa14.77□□□□□ -0.04
TSPAN4-212ENST00000494815 CD69Q07108 199 aa14.77□□□□□ -0.04
TSPAN4-212ENST00000494815 MMDQ15546 238 aa14.77□□□□□ -0.04
TSPAN4-212ENST00000494815 NPBQ8NG41 125 aa14.77□□□□□ -0.04
TSPAN4-212ENST00000494815 MRPL18Q9H0U6 180 aaKnown RBP14.77□□□□□ -0.04
TSPAN4-212ENST00000494815 FBXL15Q9H469 300 aa14.77□□□□□ -0.04
TSPAN4-212ENST00000494815 A1L4Q6 167 aa14.77□□□□□ -0.05
TSPAN4-212ENST00000494815 NBR2O15453 112 aa14.77□□□□□ -0.05
TSPAN4-212ENST00000494815 TCF21O43680 179 aa14.77□□□□□ -0.05
TSPAN4-212ENST00000494815 HNF1AP20823 631 aa14.77□□□□□ -0.05
TSPAN4-212ENST00000494815 CDKN1BP46527 198 aa14.77□□□□□ -0.05
TSPAN4-212ENST00000494815 TMEM183BQ1AE95 376 aa14.77□□□□□ -0.05
TSPAN4-212ENST00000494815 ETFRF1Q6IPR1 90 aa14.77□□□□□ -0.05
TSPAN4-212ENST00000494815 PERPQ96FX8 193 aa14.77□□□□□ -0.05
TSPAN4-212ENST00000494815 SERF1AO75920 110 aa14.76□□□□□ -0.05
TSPAN4-212ENST00000494815 NDUFA3O95167 84 aa14.76□□□□□ -0.05
TSPAN4-212ENST00000494815 CD33P20138 364 aa14.76□□□□□ -0.05
TSPAN4-212ENST00000494815 PLGLAQ15195 96 aa14.76□□□□□ -0.05
TSPAN4-212ENST00000494815 EAF1Q96JC9 268 aaPredicted RBP14.76□□□□□ -0.05
TSPAN4-212ENST00000494815 YTHDF2Q9Y5A9 579 aaKnown RBP14.76□□□□□ -0.05
TSPAN4-212ENST00000494815 IGHV4-30-2A0A087WSY4 118 aa14.75□□□□□ -0.05
TSPAN4-212ENST00000494815 PRSS47A8MTI9 375 aa14.75□□□□□ -0.05
TSPAN4-212ENST00000494815 MIC13Q5XKP0 118 aa14.75□□□□□ -0.05
TSPAN4-212ENST00000494815 HSPB9Q9BQS6 159 aa14.75□□□□□ -0.05
TSPAN4-212ENST00000494815 SRSF8Q9BRL6 282 aaKnown RBP14.75□□□□□ -0.05
TSPAN4-212ENST00000494815 PAX8Q06710 450 aa14.75□□□□□ -0.05
TSPAN4-212ENST00000494815 EBI3Q14213 229 aa14.75□□□□□ -0.05
TSPAN4-212ENST00000494815 PVRIGQ6DKI7 326 aa14.75□□□□□ -0.05
TSPAN4-212ENST00000494815 DYNAPQ8N1N2 210 aa14.75□□□□□ -0.05
TSPAN4-212ENST00000494815 OR5AU1Q8NGC0 362 aa14.75□□□□□ -0.05
TSPAN4-212ENST00000494815 LY96Q9Y6Y9 160 aa14.75□□□□□ -0.05
TSPAN4-212ENST00000494815 NAV3Q8IVL0 2385 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 TMEM238LA0A1B0GVL6 79 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 K7EN84 100 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 BRS3P32247 399 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 Q0VG73 95 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 TDRG1Q3Y452 100 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 OR1L6Q8NGR2 347 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 CHTOPQ9Y3Y2 248 aaKnown RBP14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 C9JCJ5 164 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 PLXNB1O43157 2135 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 GCHFRP30047 84 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 SSBP2P81877 361 aaPredicted RBP14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 HES1Q14469 280 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 MAJINQ3KP22 176 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 SRSF12Q8WXF0 261 aaKnown RBP14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 C11orf52Q96A22 123 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 SLC35E1Q96K37 410 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 VAMP8Q9BV40 100 aa14.74□□□□□ -0.05
TSPAN4-212ENST00000494815 SLC17A3O00476 420 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 NRGNQ92686 78 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 TRBV9A0A0B4J1U6 114 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 TEX22C9J3V5 150 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 FCN1O00602 326 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 PRR20EP86478 221 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 PRR20CP86479 221 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 PRR20DP86480 221 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 PRR20BP86481 221 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 PRR20AP86496 221 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 RPEL1Q2QD12 228 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 BAGE3Q86Y29 109 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 BAGE2Q86Y30 109 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 Q8N6K4 173 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms