RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 KLF9Q13886 244 aaPredicted RBP7.02□□□□□ -1.29
MSH5-218ENST00000494646 SMCO1Q147U7 214 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 USF2Q15853 346 aaPredicted RBP7.02□□□□□ -1.29
MSH5-218ENST00000494646 NMSQ5H8A3 153 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 ETFRF1Q6IPR1 90 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 LGI3Q8N145 548 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 TOMM5Q8N4H5 51 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 OR1S1Q8NH92 325 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 DTD1Q8TEA8 209 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 PHLDA1Q8WV24 401 aaPredicted RBP7.02□□□□□ -1.29
MSH5-218ENST00000494646 GRAMD2BQ96HH9 432 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 NARS2Q96I59 477 aaKnown RBP7.02□□□□□ -1.29
MSH5-218ENST00000494646 SHPKQ9UHJ6 478 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 U3KQE9 123 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 TRAV2A0A0B4J234 112 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 NUPR2A6NF83 97 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 IFNA4P05014 189 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 RD3LP0DJH9 198 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 PSG1P11464 419 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 YPEL3P61236 119 aaPredicted RBP7.01□□□□□ -1.29
MSH5-218ENST00000494646 ID3Q02535 119 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 ACTL10Q5JWF8 245 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 GSG1LQ6UXU4 331 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 NOXA1Q86UR1 476 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 TMEM217Q8N7C4 229 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 OR51G1Q8NGK1 321 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 C11orf45Q8TAV5 145 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 GATAD1Q8WUU5 269 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 LINC00476Q8WZB0 136 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 HSPB7Q9UBY9 170 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 FBXL17Q9UF56 701 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 PAIP2BQ9ULR5 123 aaKnown RBP7.01□□□□□ -1.29
MSH5-218ENST00000494646 KLK5Q9Y337 293 aaPredicted RBP7.01□□□□□ -1.29
MSH5-218ENST00000494646 U3KQ87 197 aa7.01□□□□□ -1.29
MSH5-218ENST00000494646 HELTA6NFD8 242 aa7□□□□□ -1.29
MSH5-218ENST00000494646 TOMM40O96008 361 aa7□□□□□ -1.29
MSH5-218ENST00000494646 IAPPP10997 89 aa7□□□□□ -1.29
MSH5-218ENST00000494646 S100A5P33763 92 aa7□□□□□ -1.29
MSH5-218ENST00000494646 FAUP35544 74 aaKnown RBP7□□□□□ -1.29
MSH5-218ENST00000494646 AP2S1P53680 142 aaPredicted RBP7□□□□□ -1.29
MSH5-218ENST00000494646 ZNF90Q03938 601 aa7□□□□□ -1.29
MSH5-218ENST00000494646 PSMG4Q5JS54 123 aa7□□□□□ -1.29
MSH5-218ENST00000494646 DCANP1Q8TF63 244 aa7□□□□□ -1.29
MSH5-218ENST00000494646 GLMPQ8WWB7 406 aa7□□□□□ -1.29
MSH5-218ENST00000494646 RAB40CQ96S21 281 aa7□□□□□ -1.29
MSH5-218ENST00000494646 PBDC1Q9BVG4 233 aa7□□□□□ -1.29
MSH5-218ENST00000494646 CLEC5AQ9NY25 188 aa7□□□□□ -1.29
MSH5-218ENST00000494646 V9GYH0 126 aa7□□□□□ -1.29
MSH5-218ENST00000494646 ZFP92A6NM28 416 aa6.99□□□□□ -1.29
MSH5-218ENST00000494646 BUB3O43684 328 aa6.99□□□□□ -1.29
MSH5-218ENST00000494646 HOXB5P09067 269 aa6.99□□□□□ -1.29
MSH5-218ENST00000494646 GIG44P09565 113 aaPredicted RBP6.99□□□□□ -1.29
MSH5-218ENST00000494646 GPX4P36969 197 aaPredicted RBP6.99□□□□□ -1.29
MSH5-218ENST00000494646 EIF2B2P49770 351 aaKnown RBP6.99□□□□□ -1.29
MSH5-218ENST00000494646 AP3S2P59780 193 aa6.99□□□□□ -1.29
MSH5-218ENST00000494646 OR2F1Q13607 317 aa6.99□□□□□ -1.29
MSH5-218ENST00000494646 GAMTQ14353 236 aa6.99□□□□□ -1.29
MSH5-218ENST00000494646 ZNF79Q15937 498 aa6.99□□□□□ -1.29
MSH5-218ENST00000494646 TMEM128Q5BJH2 165 aa6.99□□□□□ -1.29
MSH5-218ENST00000494646 TRPT1Q86TN4 253 aaKnown RBP6.99□□□□□ -1.29
MSH5-218ENST00000494646 MAGT1Q9H0U3 335 aa6.99□□□□□ -1.29
MSH5-218ENST00000494646 CACFD1Q9UGQ2 172 aa6.99□□□□□ -1.29
MSH5-218ENST00000494646 IGKV1D-37A0A075B6S9 117 aa6.98□□□□□ -1.29
MSH5-218ENST00000494646 LINC00854A0A1B0GVQ3 168 aa6.98□□□□□ -1.29
MSH5-218ENST00000494646 WRBO00258 174 aa6.98□□□□□ -1.29
MSH5-218ENST00000494646 PITX3O75364 302 aa6.98□□□□□ -1.29
MSH5-218ENST00000494646 C4BPBP20851 252 aa6.98□□□□□ -1.29
MSH5-218ENST00000494646 DEFB1P60022 68 aa6.98□□□□□ -1.29
MSH5-218ENST00000494646 SRPXP78539 464 aa6.98□□□□□ -1.29
MSH5-218ENST00000494646 PPP1R1AQ13522 171 aa6.98□□□□□ -1.29
MSH5-218ENST00000494646 SIGLEC15Q6ZMC9 328 aa6.98□□□□□ -1.29
MSH5-218ENST00000494646 CCDC190Q86UF4 302 aa6.98□□□□□ -1.29
MSH5-218ENST00000494646 RNF125Q96EQ8 232 aa6.98□□□□□ -1.29
MSH5-218ENST00000494646 SLC35E1Q96K37 410 aa6.98□□□□□ -1.29
MSH5-218ENST00000494646 IGHV4-28A0A0C4DH34 117 aa6.97□□□□□ -1.29
MSH5-218ENST00000494646 FAM90A26D6RGX4 464 aa6.97□□□□□ -1.29
MSH5-218ENST00000494646 SFT2D2O95562 160 aa6.97□□□□□ -1.29
MSH5-218ENST00000494646 IGKV3-20P01619 116 aa6.97□□□□□ -1.29
MSH5-218ENST00000494646 RBMY1A1P0DJD3 496 aaKnown RBP6.97□□□□□ -1.29
MSH5-218ENST00000494646 RBMY1CP0DJD4 496 aa6.97□□□□□ -1.29
MSH5-218ENST00000494646 LYZP61626 148 aa6.97□□□□□ -1.29
MSH5-218ENST00000494646 RAB11AP62491 216 aa6.97□□□□□ -1.29
MSH5-218ENST00000494646 RBMY1FQ15415 496 aaKnown RBP6.97□□□□□ -1.29
MSH5-218ENST00000494646 BAK1Q16611 211 aa6.97□□□□□ -1.29
MSH5-218ENST00000494646 MORN3Q6PF18 240 aaPredicted RBP6.97□□□□□ -1.29
MSH5-218ENST00000494646 LRTM2Q8N967 370 aa6.97□□□□□ -1.29
MSH5-218ENST00000494646 LINC00052Q96N35 136 aa6.97□□□□□ -1.29
MSH5-218ENST00000494646 SLC25A21Q9BQT8 299 aaPredicted RBP6.97□□□□□ -1.29
MSH5-218ENST00000494646 NRN1Q9NPD7 142 aa6.97□□□□□ -1.29
MSH5-218ENST00000494646 FAT2Q9NYQ8 4349 aa6.96□□□□□ -1.29
MSH5-218ENST00000494646 DUXBA0A1W2PPF3 345 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 SNRPGP15A8MWD9 76 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 MED6O75586 246 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 DEDDO75618 318 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 SPP1P10451 314 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 GATA2P23769 480 aaPredicted RBP6.96□□□□□ -1.3
MSH5-218ENST00000494646 INPP1P49441 399 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 ATP5IP56385 69 aaPredicted RBP6.96□□□□□ -1.3
MSH5-218ENST00000494646 FXYD7P58549 80 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 SNRPD3P62318 126 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms