RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 TMEM144Q7Z5S9 345 aa10.17□□□□□ -0.78
COL1A1-208ENST00000494334 OR51G1Q8NGK1 321 aa10.17□□□□□ -0.78
COL1A1-208ENST00000494334 ST8SIA2Q92186 375 aa10.17□□□□□ -0.78
COL1A1-208ENST00000494334 METTL26Q96S19 204 aa10.17□□□□□ -0.78
COL1A1-208ENST00000494334 LYRM2Q9NU23 88 aaPredicted RBP10.17□□□□□ -0.78
COL1A1-208ENST00000494334 SMAD5-AS1Q9Y6J3 95 aa10.17□□□□□ -0.78
COL1A1-208ENST00000494334 SMCO3A2RU48 225 aa10.16□□□□□ -0.78
COL1A1-208ENST00000494334 H0YIZ8 118 aa10.16□□□□□ -0.78
COL1A1-208ENST00000494334 TSPAN4O14817 238 aa10.16□□□□□ -0.78
COL1A1-208ENST00000494334 RLN2P04090 185 aa10.16□□□□□ -0.78
COL1A1-208ENST00000494334 CD7P09564 240 aa10.16□□□□□ -0.78
COL1A1-208ENST00000494334 LRRC37A5PQ49AS3 106 aa10.16□□□□□ -0.78
COL1A1-208ENST00000494334 FAM90A2PQ658T7 463 aa10.16□□□□□ -0.78
COL1A1-208ENST00000494334 GTSCR1Q86UQ5 136 aa10.16□□□□□ -0.78
COL1A1-208ENST00000494334 TMEM252Q8N6L7 170 aa10.16□□□□□ -0.78
COL1A1-208ENST00000494334 U3KQE9 123 aa10.16□□□□□ -0.78
COL1A1-208ENST00000494334 A0A1W2PS18 150 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 IGSF23A1L1A6 192 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 FNDC10F2Z333 226 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 CST7O76096 145 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 FABP1P07148 127 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 HNRNPCP07910 306 aaKnown RBP eCLIP10.15□□□□□ -0.78
COL1A1-208ENST00000494334 CXCL3P19876 107 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 BMI1P35226 326 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 CD81P60033 236 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 OR2F1Q13607 317 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 TMEM182Q6ZP80 229 aaPredicted RBP10.15□□□□□ -0.78
COL1A1-208ENST00000494334 PPP1R1CQ8WVI7 109 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 RNF125Q96EQ8 232 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 SPAG8Q99932 426 aaPredicted RBP10.15□□□□□ -0.78
COL1A1-208ENST00000494334 NEURL2Q9BR09 285 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 GGACTQ9BVM4 153 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 NPVFQ9HCQ7 196 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 OR5AC2Q9NZP5 309 aa10.15□□□□□ -0.78
COL1A1-208ENST00000494334 DNAH9Q9NYC9 4486 aa10.14□□□□□ -0.79
COL1A1-208ENST00000494334 E5RGE8 158 aa10.14□□□□□ -0.79
COL1A1-208ENST00000494334 DFFBO76075 338 aa10.14□□□□□ -0.79
COL1A1-208ENST00000494334 IGHV4-30-4P0DP06 118 aa10.14□□□□□ -0.79
COL1A1-208ENST00000494334 GATA2P23769 480 aaPredicted RBP10.14□□□□□ -0.79
COL1A1-208ENST00000494334 SULT1A1P50225 295 aa10.14□□□□□ -0.79
COL1A1-208ENST00000494334 FCN2Q15485 313 aa10.14□□□□□ -0.79
COL1A1-208ENST00000494334 TCF24Q7RTU0 167 aa10.14□□□□□ -0.79
COL1A1-208ENST00000494334 TMEM217Q8N7C4 229 aa10.14□□□□□ -0.79
COL1A1-208ENST00000494334 RNF126Q9BV68 326 aa10.14□□□□□ -0.79
COL1A1-208ENST00000494334 PBDC1Q9BVG4 233 aa10.14□□□□□ -0.79
COL1A1-208ENST00000494334 MED28Q9H204 178 aa10.14□□□□□ -0.79
COL1A1-208ENST00000494334 TMEM231Q9H6L2 316 aa10.14□□□□□ -0.79
COL1A1-208ENST00000494334 RABAC1Q9UI14 185 aa10.14□□□□□ -0.79
COL1A1-208ENST00000494334 IGKV3-7A0A075B6H7 116 aa10.13□□□□□ -0.79
COL1A1-208ENST00000494334 MPC2O95563 127 aa10.13□□□□□ -0.79
COL1A1-208ENST00000494334 CD5P06127 495 aa10.13□□□□□ -0.79
COL1A1-208ENST00000494334 P2RY1P47900 373 aa10.13□□□□□ -0.79
COL1A1-208ENST00000494334 LYZP61626 148 aa10.13□□□□□ -0.79
COL1A1-208ENST00000494334 SLC38A11Q08AI6 406 aa10.13□□□□□ -0.79
COL1A1-208ENST00000494334 CYP2G1PQ6ZSU1 146 aa10.13□□□□□ -0.79
COL1A1-208ENST00000494334 OR11H7Q8NGC8 314 aa10.13□□□□□ -0.79
COL1A1-208ENST00000494334 NARS2Q96I59 477 aaKnown RBP10.13□□□□□ -0.79
COL1A1-208ENST00000494334 B9D2Q9BPU9 175 aa10.13□□□□□ -0.79
COL1A1-208ENST00000494334 C19orf73Q9NVV2 129 aa10.13□□□□□ -0.79
COL1A1-208ENST00000494334 A8MZ25 164 aa10.12□□□□□ -0.79
COL1A1-208ENST00000494334 BUB3O43684 328 aa10.12□□□□□ -0.79
COL1A1-208ENST00000494334 CFDP00746 253 aaPredicted RBP10.12□□□□□ -0.79
COL1A1-208ENST00000494334 S100A11P31949 105 aa10.12□□□□□ -0.79
COL1A1-208ENST00000494334 EIF2B2P49770 351 aaKnown RBP10.12□□□□□ -0.79
COL1A1-208ENST00000494334 TEPPQ6URK8 271 aa10.12□□□□□ -0.79
COL1A1-208ENST00000494334 C16orf54Q6UWD8 224 aa10.12□□□□□ -0.79
COL1A1-208ENST00000494334 STX12Q86Y82 276 aa10.12□□□□□ -0.79
COL1A1-208ENST00000494334 DEFB125Q8N687 156 aa10.12□□□□□ -0.79
COL1A1-208ENST00000494334 STPG3Q8N7X2 389 aa10.12□□□□□ -0.79
COL1A1-208ENST00000494334 BPIFCQ8NFQ6 507 aa10.12□□□□□ -0.79
COL1A1-208ENST00000494334 GRAMD2BQ96HH9 432 aa10.12□□□□□ -0.79
COL1A1-208ENST00000494334 WFDC10AQ9H1F0 79 aa10.12□□□□□ -0.79
COL1A1-208ENST00000494334 OR4C46A6NHA9 309 aa10.11□□□□□ -0.79
COL1A1-208ENST00000494334 OR11H12B2RN74 326 aa10.11□□□□□ -0.79
COL1A1-208ENST00000494334 FRMD6-AS1P0C7T7 363 aa10.11□□□□□ -0.79
COL1A1-208ENST00000494334 TFPI2P48307 235 aa10.11□□□□□ -0.79
COL1A1-208ENST00000494334 RPL11P62913 178 aaKnown RBP10.11□□□□□ -0.79
COL1A1-208ENST00000494334 NHLH2Q02577 135 aa10.11□□□□□ -0.79
COL1A1-208ENST00000494334 VWC2Q2TAL6 325 aa10.11□□□□□ -0.79
COL1A1-208ENST00000494334 GBGT1Q8N5D6 347 aa10.11□□□□□ -0.79
COL1A1-208ENST00000494334 GLMPQ8WWB7 406 aa10.11□□□□□ -0.79
COL1A1-208ENST00000494334 SLC25A31Q9H0C2 315 aa10.11□□□□□ -0.79
COL1A1-208ENST00000494334 MS4A6AQ9H2W1 248 aa10.11□□□□□ -0.79
COL1A1-208ENST00000494334 PET100P0DJ07 73 aa10.1□□□□□ -0.79
COL1A1-208ENST00000494334 ORM2P19652 201 aa10.1□□□□□ -0.79
COL1A1-208ENST00000494334 SELENOTP62341 195 aa10.1□□□□□ -0.79
COL1A1-208ENST00000494334 PAFAH1B2P68402 229 aa10.1□□□□□ -0.79
COL1A1-208ENST00000494334 HBG1P69891 147 aa10.1□□□□□ -0.79
COL1A1-208ENST00000494334 HBG2P69892 147 aa10.1□□□□□ -0.79
COL1A1-208ENST00000494334 EWSR1Q01844 656 aaKnown RBP eCLIP10.1□□□□□ -0.79
COL1A1-208ENST00000494334 ATP6V1FQ16864 119 aa10.1□□□□□ -0.79
COL1A1-208ENST00000494334 WFDC3Q8IUB2 231 aa10.1□□□□□ -0.79
COL1A1-208ENST00000494334 UQCC1Q9NVA1 299 aa10.1□□□□□ -0.79
COL1A1-208ENST00000494334 UBQLN2Q9UHD9 624 aa10.1□□□□□ -0.79
COL1A1-208ENST00000494334 DNASE2O00115 360 aaPredicted RBP10.09□□□□□ -0.79
COL1A1-208ENST00000494334 AGPAT2O15120 278 aa10.09□□□□□ -0.79
COL1A1-208ENST00000494334 LINC00869P0C866 280 aa10.09□□□□□ -0.79
COL1A1-208ENST00000494334 AP2S1P53680 142 aaPredicted RBP10.09□□□□□ -0.79
COL1A1-208ENST00000494334 ODF3L2Q3SX64 289 aa10.09□□□□□ -0.79
COL1A1-208ENST00000494334 SBSPONQ8IVN8 264 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms