RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 TRAPPC2BP0DI82 140 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 RAB3BP20337 219 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 DTYMKP23919 212 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 PSMA1P25786 263 aaKnown RBP3.72□□□□□ -1.81
PTCD3-219ENST00000494323 MFAP2P55001 183 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 WT1-ASQ06250 92 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 MLLT11Q13015 90 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-219ENST00000494323 SSX1Q16384 188 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 TIMM50Q3ZCQ8 353 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 Q56UQ5 140 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 OGFRL1Q5TC84 451 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-219ENST00000494323 HOGA1Q86XE5 327 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 GVQW1Q8N7I0 195 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 VN1R17PQ8TDU5 208 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 GIMAP1Q8WWP7 306 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 RHPN1-AS1Q9BWJ2 59 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 C6orf62Q9GZU0 229 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-219ENST00000494323 MFFQ9GZY8 342 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 DCSTAMPQ9H295 470 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 VCXQ9H320 206 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 DUSP21Q9H596 190 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 BET1LQ9NYM9 111 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 SMPXQ9UHP9 88 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 ANXA10Q9UJ72 324 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 TPRKBQ9Y3C4 175 aa3.72□□□□□ -1.81
PTCD3-219ENST00000494323 RYR1P21817 5038 aa3.71□□□□□ -1.81
PTCD3-219ENST00000494323 HECTD4Q9Y4D8 3996 aa3.71□□□□□ -1.81
PTCD3-219ENST00000494323 TRAV14DV4A0A0A6YYC5 116 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 IGHV3-66A0A0C4DH42 116 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 IGHV7-4-1A0A0J9YVY3 117 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 K7EMT4 169 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 CHEK1O14757 476 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 HPRT1P00492 218 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 CA1P00915 261 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-219ENST00000494323 NQO2P16083 231 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 HLA-DMBP28068 263 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 RANBP1P43487 201 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 HSPA13P48723 471 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 FHITP49789 147 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 CMC4P56277 68 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-219ENST00000494323 TAS2R31P59538 309 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 FXYD4P59646 89 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 GNG2P59768 71 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 SSTP61278 116 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 TMEM187Q14656 261 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 LEMD1Q68G75 181 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 C22orf42Q6IC83 251 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 GDPD1Q8N9F7 314 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 OR4D10Q8NGI6 311 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 OR51H1Q8NH63 302 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 RAB40CQ96S21 281 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 FUNDC2Q9BWH2 189 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 C21orf62Q9NYP8 219 aa3.71□□□□□ -1.82
PTCD3-219ENST00000494323 A0A1B0GVY2 172 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 TRDV1A0A1B0GX56 115 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 MEIS3P1A6NDR6 274 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 F8WDY8 70 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 K7EIM0 57 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 DNASE2O00115 360 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-219ENST00000494323 CCSO14618 274 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 CASQ2O14958 399 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-219ENST00000494323 NUPL2O15504 423 aaKnown RBP3.7□□□□□ -1.82
PTCD3-219ENST00000494323 CYB5BO43169 146 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 MRPS14O60783 128 aaKnown RBP3.7□□□□□ -1.82
PTCD3-219ENST00000494323 KRASP01116 189 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 PPYP01298 95 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 RBMY1A1P0DJD3 496 aaKnown RBP3.7□□□□□ -1.82
PTCD3-219ENST00000494323 RBMY1CP0DJD4 496 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 MYL9P24844 172 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 LPAR6P43657 344 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 TCTAP57738 103 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 DEFB131AP59861 70 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 ARPC4P59998 168 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 RIGQ13278 110 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 ARL6IP1Q15041 203 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 RBMY1FQ15415 496 aaKnown RBP3.7□□□□□ -1.82
PTCD3-219ENST00000494323 AADACL3Q5VUY0 350 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 FAM159AQ6UWV7 190 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 ZNF818PQ6ZRF7 136 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 ZNF767PQ75MW2 155 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 TCF24Q7RTU0 167 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 PRSS48Q7RTY5 328 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 TMEM17Q86X19 198 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 FAM24BQ8N5W8 94 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 BEST4Q8NFU0 473 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 OR1L8Q8NGR8 309 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 OR13F1Q8NGS4 319 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 SLC25A46Q96AG3 418 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 ZNF414Q96IQ9 312 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 SCRT1Q9BWW7 348 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 MS4A6AQ9H2W1 248 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 C11orf68Q9H3H3 251 aaKnown RBP3.7□□□□□ -1.82
PTCD3-219ENST00000494323 Q9H521 79 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 SCRT2Q9NQ03 307 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 NDUFA4L2Q9NRX3 87 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 CLEC5AQ9NY25 188 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 BLOC1S6Q9UL45 172 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 OR51B2Q9Y5P1 312 aa3.7□□□□□ -1.82
PTCD3-219ENST00000494323 F11RQ9Y624 299 aaKnown RBP3.7□□□□□ -1.82
PTCD3-219ENST00000494323 VPS13DQ5THJ4 4388 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms