RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 V9GYH0 126 aa9.77□□□□□ -0.85
CTDSP1-212ENST00000494067 AGRNO00468 2067 aa9.77□□□□□ -0.85
CTDSP1-212ENST00000494067 FRAS1Q86XX4 4008 aa9.77□□□□□ -0.85
CTDSP1-212ENST00000494067 ZFP92A6NM28 416 aa9.76□□□□□ -0.85
CTDSP1-212ENST00000494067 USF2Q15853 346 aaPredicted RBP9.76□□□□□ -0.85
CTDSP1-212ENST00000494067 ZNF79Q15937 498 aa9.76□□□□□ -0.85
CTDSP1-212ENST00000494067 SIGLEC15Q6ZMC9 328 aa9.76□□□□□ -0.85
CTDSP1-212ENST00000494067 OR51G1Q8NGK1 321 aa9.76□□□□□ -0.85
CTDSP1-212ENST00000494067 MCFD2Q8NI22 146 aa9.76□□□□□ -0.85
CTDSP1-212ENST00000494067 SLC35E1Q96K37 410 aa9.76□□□□□ -0.85
CTDSP1-212ENST00000494067 RAB40CQ96S21 281 aa9.76□□□□□ -0.85
CTDSP1-212ENST00000494067 SEPSECSQ9HD40 501 aaKnown RBP9.76□□□□□ -0.85
CTDSP1-212ENST00000494067 NRN1Q9NPD7 142 aa9.76□□□□□ -0.85
CTDSP1-212ENST00000494067 HSPB7Q9UBY9 170 aa9.76□□□□□ -0.85
CTDSP1-212ENST00000494067 DUXBA0A1W2PPF3 345 aa9.75□□□□□ -0.85
CTDSP1-212ENST00000494067 PSG1P11464 419 aa9.75□□□□□ -0.85
CTDSP1-212ENST00000494067 C4BPBP20851 252 aa9.75□□□□□ -0.85
CTDSP1-212ENST00000494067 RAB11AP62491 216 aa9.75□□□□□ -0.85
CTDSP1-212ENST00000494067 RPP30P78346 268 aaKnown RBP9.75□□□□□ -0.85
CTDSP1-212ENST00000494067 GSG1LQ6UXU4 331 aa9.75□□□□□ -0.85
CTDSP1-212ENST00000494067 TMED4Q7Z7H5 227 aa9.75□□□□□ -0.85
CTDSP1-212ENST00000494067 TOMM5Q8N4H5 51 aa9.75□□□□□ -0.85
CTDSP1-212ENST00000494067 GLMPQ8WWB7 406 aa9.75□□□□□ -0.85
CTDSP1-212ENST00000494067 PBDC1Q9BVG4 233 aa9.75□□□□□ -0.85
CTDSP1-212ENST00000494067 HRH4Q9H3N8 390 aa9.75□□□□□ -0.85
CTDSP1-212ENST00000494067 RBKSQ9H477 322 aa9.75□□□□□ -0.85
CTDSP1-212ENST00000494067 BUB3O43684 328 aa9.74□□□□□ -0.85
CTDSP1-212ENST00000494067 MED6O75586 246 aa9.74□□□□□ -0.85
CTDSP1-212ENST00000494067 S100A5P33763 92 aa9.74□□□□□ -0.85
CTDSP1-212ENST00000494067 GPX4P36969 197 aaPredicted RBP9.74□□□□□ -0.85
CTDSP1-212ENST00000494067 ID1P41134 155 aa9.74□□□□□ -0.85
CTDSP1-212ENST00000494067 PYDC2Q56P42 97 aa9.74□□□□□ -0.85
CTDSP1-212ENST00000494067 TMEM128Q5BJH2 165 aa9.74□□□□□ -0.85
CTDSP1-212ENST00000494067 OR8G2PQ6IF36 304 aa9.74□□□□□ -0.85
CTDSP1-212ENST00000494067 RNF125Q96EQ8 232 aa9.74□□□□□ -0.85
CTDSP1-212ENST00000494067 TBC1D24Q9ULP9 559 aa9.74□□□□□ -0.85
CTDSP1-212ENST00000494067 PAIP2BQ9ULR5 123 aaKnown RBP9.74□□□□□ -0.85
CTDSP1-212ENST00000494067 IGKV1D-37A0A075B6S9 117 aa9.73□□□□□ -0.85
CTDSP1-212ENST00000494067 IGHV4-28A0A0C4DH34 117 aa9.73□□□□□ -0.85
CTDSP1-212ENST00000494067 SNRPGP15A8MWD9 76 aa9.73□□□□□ -0.85
CTDSP1-212ENST00000494067 IGLL5B9A064 214 aa9.73□□□□□ -0.85
CTDSP1-212ENST00000494067 FAM90A26D6RGX4 464 aa9.73□□□□□ -0.85
CTDSP1-212ENST00000494067 VAMP1P23763 118 aa9.73□□□□□ -0.85
CTDSP1-212ENST00000494067 Q8NAQ8 132 aa9.73□□□□□ -0.85
CTDSP1-212ENST00000494067 PPP1R14BQ96C90 147 aa9.73□□□□□ -0.85
CTDSP1-212ENST00000494067 RBM38Q9H0Z9 239 aaKnown RBP9.73□□□□□ -0.85
CTDSP1-212ENST00000494067 TRAV10A0A0B4J240 114 aa9.72□□□□□ -0.85
CTDSP1-212ENST00000494067 CCDC160A6NGH7 325 aa9.72□□□□□ -0.85
CTDSP1-212ENST00000494067 ZNF705EA8MWA4 302 aaPredicted RBP9.72□□□□□ -0.85
CTDSP1-212ENST00000494067 S100A7P31151 101 aa9.72□□□□□ -0.85
CTDSP1-212ENST00000494067 DEDD2Q8WXF8 326 aa9.72□□□□□ -0.85
CTDSP1-212ENST00000494067 CIB3Q96Q77 187 aaPredicted RBP9.72□□□□□ -0.85
CTDSP1-212ENST00000494067 SLC25A21Q9BQT8 299 aaPredicted RBP9.72□□□□□ -0.85
CTDSP1-212ENST00000494067 CLEC5AQ9NY25 188 aa9.72□□□□□ -0.85
CTDSP1-212ENST00000494067 VPS13DQ5THJ4 4388 aa9.71□□□□□ -0.85
CTDSP1-212ENST00000494067 PITX3O75364 302 aa9.71□□□□□ -0.86
CTDSP1-212ENST00000494067 CFDP00746 253 aaPredicted RBP9.71□□□□□ -0.86
CTDSP1-212ENST00000494067 SLC25A6P12236 298 aa9.71□□□□□ -0.86
CTDSP1-212ENST00000494067 HLA-DMBP28068 263 aa9.71□□□□□ -0.86
CTDSP1-212ENST00000494067 NKX2-1P43699 371 aaPredicted RBP9.71□□□□□ -0.86
CTDSP1-212ENST00000494067 DEFB1P60022 68 aa9.71□□□□□ -0.86
CTDSP1-212ENST00000494067 LYZP61626 148 aa9.71□□□□□ -0.86
CTDSP1-212ENST00000494067 GAMTQ14353 236 aa9.71□□□□□ -0.86
CTDSP1-212ENST00000494067 C1orf194Q5T5A4 169 aa9.71□□□□□ -0.86
CTDSP1-212ENST00000494067 RPP25LQ8N5L8 163 aaKnown RBP9.71□□□□□ -0.86
CTDSP1-212ENST00000494067 COQ8AQ8NI60 647 aa9.71□□□□□ -0.86
CTDSP1-212ENST00000494067 TMED3Q9Y3Q3 217 aa9.71□□□□□ -0.86
CTDSP1-212ENST00000494067 H3BMM0 161 aa9.7□□□□□ -0.86
CTDSP1-212ENST00000494067 DEDDO75618 318 aa9.7□□□□□ -0.86
CTDSP1-212ENST00000494067 RBMY1A1P0DJD3 496 aaKnown RBP9.7□□□□□ -0.86
CTDSP1-212ENST00000494067 RBMY1CP0DJD4 496 aa9.7□□□□□ -0.86
CTDSP1-212ENST00000494067 INPP1P49441 399 aa9.7□□□□□ -0.86
CTDSP1-212ENST00000494067 ZNF90Q03938 601 aa9.7□□□□□ -0.86
CTDSP1-212ENST00000494067 RBMY1FQ15415 496 aaKnown RBP9.7□□□□□ -0.86
CTDSP1-212ENST00000494067 SAMD13Q5VXD3 122 aa9.7□□□□□ -0.86
CTDSP1-212ENST00000494067 GGNBP1Q5YKI7 109 aa9.7□□□□□ -0.86
CTDSP1-212ENST00000494067 CCDC190Q86UF4 302 aa9.7□□□□□ -0.86
CTDSP1-212ENST00000494067 CSNK1G2-AS1Q8NCQ2 148 aa9.7□□□□□ -0.86
CTDSP1-212ENST00000494067 LINC00052Q96N35 136 aa9.7□□□□□ -0.86
CTDSP1-212ENST00000494067 X6R8D5 127 aa9.7□□□□□ -0.86
CTDSP1-212ENST00000494067 IGKV1OR2-108A0A075B7D4 117 aa9.69□□□□□ -0.86
CTDSP1-212ENST00000494067 IAPPP10997 89 aa9.69□□□□□ -0.86
CTDSP1-212ENST00000494067 HLA-DRB4P13762 266 aa9.69□□□□□ -0.86
CTDSP1-212ENST00000494067 DNAH10Q8IVF4 4471 aa9.69□□□□□ -0.86
CTDSP1-212ENST00000494067 OR8I2Q8N0Y5 310 aa9.69□□□□□ -0.86
CTDSP1-212ENST00000494067 LRTM2Q8N967 370 aa9.69□□□□□ -0.86
CTDSP1-212ENST00000494067 TRGV9Q99603 122 aa9.69□□□□□ -0.86
CTDSP1-212ENST00000494067 XCL2Q9UBD3 114 aa9.69□□□□□ -0.86
CTDSP1-212ENST00000494067 HLA-DRB4X5D2U9 266 aa9.69□□□□□ -0.86
CTDSP1-212ENST00000494067 ELOA3CA0A087WX78 387 aaPredicted RBP9.68□□□□□ -0.86
CTDSP1-212ENST00000494067 PRSS46E5RG02 174 aa9.68□□□□□ -0.86
CTDSP1-212ENST00000494067 SYNGR2O43760 224 aa9.68□□□□□ -0.86
CTDSP1-212ENST00000494067 SFT2D2O95562 160 aa9.68□□□□□ -0.86
CTDSP1-212ENST00000494067 PSMB3P49720 205 aa9.68□□□□□ -0.86
CTDSP1-212ENST00000494067 PPP1R1AQ13522 171 aa9.68□□□□□ -0.86
CTDSP1-212ENST00000494067 OR2F1Q13607 317 aa9.68□□□□□ -0.86
CTDSP1-212ENST00000494067 GDF5OSQ5U4N7 250 aa9.68□□□□□ -0.86
CTDSP1-212ENST00000494067 SPATA31B1PQ5VZV4 182 aa9.68□□□□□ -0.86
CTDSP1-212ENST00000494067 EBLN2Q6P2I7 272 aa9.68□□□□□ -0.86
CTDSP1-212ENST00000494067 Q6ZTC4 211 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms