RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 GLMPQ8WWB7 406 aa16.74■□□□□ 0.27
SNIP1-203ENST00000493916 RABAC1Q9UI14 185 aa16.74■□□□□ 0.27
SNIP1-203ENST00000493916 TBC1D24Q9ULP9 559 aa16.74■□□□□ 0.27
SNIP1-203ENST00000493916 STRAPQ9Y3F4 350 aaKnown RBP16.74■□□□□ 0.27
SNIP1-203ENST00000493916 TRAV6A0A075B6T7 132 aa16.73■□□□□ 0.27
SNIP1-203ENST00000493916 HELTA6NFD8 242 aa16.73■□□□□ 0.27
SNIP1-203ENST00000493916 UBE2CO00762 179 aa16.73■□□□□ 0.27
SNIP1-203ENST00000493916 EIF2B2P49770 351 aaKnown RBP16.73■□□□□ 0.27
SNIP1-203ENST00000493916 IAH1Q2TAA2 248 aaPredicted RBP16.73■□□□□ 0.27
SNIP1-203ENST00000493916 Q6ZWC4 215 aa16.73■□□□□ 0.27
SNIP1-203ENST00000493916 WFDC3Q8IUB2 231 aa16.73■□□□□ 0.27
SNIP1-203ENST00000493916 THAP8Q8NA92 274 aa16.73■□□□□ 0.27
SNIP1-203ENST00000493916 RNF125Q96EQ8 232 aa16.73■□□□□ 0.27
SNIP1-203ENST00000493916 TRGV9Q99603 122 aa16.73■□□□□ 0.27
SNIP1-203ENST00000493916 WDR12Q9GZL7 423 aaKnown RBP16.73■□□□□ 0.27
SNIP1-203ENST00000493916 H3BP45 60 aa16.72■□□□□ 0.27
SNIP1-203ENST00000493916 K7EQG2 157 aa16.72■□□□□ 0.27
SNIP1-203ENST00000493916 LYL1P12980 280 aa16.72■□□□□ 0.27
SNIP1-203ENST00000493916 ZNF90Q03938 601 aa16.72■□□□□ 0.27
SNIP1-203ENST00000493916 ASAH1Q13510 395 aa16.72■□□□□ 0.27
SNIP1-203ENST00000493916 OR8G2PQ6IF36 304 aa16.72■□□□□ 0.27
SNIP1-203ENST00000493916 ZBTB8BQ8NAP8 495 aaPredicted RBP16.72■□□□□ 0.27
SNIP1-203ENST00000493916 STXBP6Q8NFX7 210 aa16.72■□□□□ 0.27
SNIP1-203ENST00000493916 OVOL2Q9BRP0 275 aa16.72■□□□□ 0.27
SNIP1-203ENST00000493916 TP53TG1Q9Y2A0 90 aa16.72■□□□□ 0.27
SNIP1-203ENST00000493916 SSSCA1O60232 199 aa16.71■□□□□ 0.27
SNIP1-203ENST00000493916 NUP62P37198 522 aaPredicted RBP16.71■□□□□ 0.27
SNIP1-203ENST00000493916 ZNF124Q15973 351 aa16.71■□□□□ 0.27
SNIP1-203ENST00000493916 CASC10Q5T4H9 136 aa16.71■□□□□ 0.27
SNIP1-203ENST00000493916 MZT2BQ6NZ67 158 aa16.71■□□□□ 0.27
SNIP1-203ENST00000493916 FAM24BQ8N5W8 94 aa16.71■□□□□ 0.27
SNIP1-203ENST00000493916 ZNF431Q8TF32 576 aaPredicted RBP16.71■□□□□ 0.27
SNIP1-203ENST00000493916 DCANP1Q8TF63 244 aa16.71■□□□□ 0.27
SNIP1-203ENST00000493916 SMIM8Q96KF7 97 aa16.71■□□□□ 0.27
SNIP1-203ENST00000493916 IGKV1OR2-108A0A075B7D4 117 aa16.7■□□□□ 0.26
SNIP1-203ENST00000493916 FAM240BA0A1B0GVZ2 78 aa16.7■□□□□ 0.26
SNIP1-203ENST00000493916 BUB3O43684 328 aa16.7■□□□□ 0.26
SNIP1-203ENST00000493916 RPL35AP18077 110 aaKnown RBP16.7■□□□□ 0.26
SNIP1-203ENST00000493916 AP2S1P53680 142 aaPredicted RBP16.7■□□□□ 0.26
SNIP1-203ENST00000493916 ZNF846Q147U1 533 aa16.7■□□□□ 0.26
SNIP1-203ENST00000493916 STPG3Q8N7X2 389 aa16.7■□□□□ 0.26
SNIP1-203ENST00000493916 PSENENQ9NZ42 101 aa16.7■□□□□ 0.26
SNIP1-203ENST00000493916 H2AFB2P0C5Z0 115 aa16.69■□□□□ 0.26
SNIP1-203ENST00000493916 DEFB131AP59861 70 aa16.69■□□□□ 0.26
SNIP1-203ENST00000493916 ACOT7LQ6ZUV0 252 aa16.69■□□□□ 0.26
SNIP1-203ENST00000493916 RAB40CQ96S21 281 aa16.69■□□□□ 0.26
SNIP1-203ENST00000493916 SEC22CQ9BRL7 303 aa16.69■□□□□ 0.26
SNIP1-203ENST00000493916 PFDN2Q9UHV9 154 aa16.69■□□□□ 0.26
SNIP1-203ENST00000493916 CSMD3Q7Z407 3707 aa16.69■□□□□ 0.26
SNIP1-203ENST00000493916 SNRPGP15A8MWD9 76 aa16.68■□□□□ 0.26
SNIP1-203ENST00000493916 UPK1BO75841 260 aa16.68■□□□□ 0.26
SNIP1-203ENST00000493916 PAX9P55771 341 aa16.68■□□□□ 0.26
SNIP1-203ENST00000493916 TAS2R30P59541 319 aa16.68■□□□□ 0.26
SNIP1-203ENST00000493916 PBDC1Q9BVG4 233 aa16.68■□□□□ 0.26
SNIP1-203ENST00000493916 BATF3Q9NR55 127 aa16.68■□□□□ 0.26
SNIP1-203ENST00000493916 RCL1Q9Y2P8 373 aaKnown RBP16.68■□□□□ 0.26
SNIP1-203ENST00000493916 SPRY2O43597 315 aa16.67■□□□□ 0.26
SNIP1-203ENST00000493916 SCGB1D2O95969 90 aa16.67■□□□□ 0.26
SNIP1-203ENST00000493916 CFDP00746 253 aaPredicted RBP16.67■□□□□ 0.26
SNIP1-203ENST00000493916 DEFB135Q30KP9 77 aa16.67■□□□□ 0.26
SNIP1-203ENST00000493916 LEMD1Q68G75 181 aa16.67■□□□□ 0.26
SNIP1-203ENST00000493916 TMEM14EPQ6UXP3 125 aa16.67■□□□□ 0.26
SNIP1-203ENST00000493916 SIGLEC15Q6ZMC9 328 aa16.67■□□□□ 0.26
SNIP1-203ENST00000493916 GSKIPQ9P0R6 139 aa16.67■□□□□ 0.26
SNIP1-203ENST00000493916 PMS2P5A8MQ11 134 aa16.66■□□□□ 0.26
SNIP1-203ENST00000493916 CCSO14618 274 aa16.66■□□□□ 0.26
SNIP1-203ENST00000493916 TSC22D2O75157 780 aa16.66■□□□□ 0.26
SNIP1-203ENST00000493916 LYZP61626 148 aa16.66■□□□□ 0.26
SNIP1-203ENST00000493916 AKR1C1Q04828 323 aa16.66■□□□□ 0.26
SNIP1-203ENST00000493916 OR2F1Q13607 317 aa16.66■□□□□ 0.26
SNIP1-203ENST00000493916 C12orf45Q8N5I9 185 aaPredicted RBP16.66■□□□□ 0.26
SNIP1-203ENST00000493916 RNF183Q96D59 192 aa16.66■□□□□ 0.26
SNIP1-203ENST00000493916 CSTL1Q9H114 145 aa16.66■□□□□ 0.26
SNIP1-203ENST00000493916 MBPP02686 304 aaPredicted RBP16.65■□□□□ 0.26
SNIP1-203ENST00000493916 C1orf194Q5T5A4 169 aa16.65■□□□□ 0.26
SNIP1-203ENST00000493916 TMEM144Q7Z5S9 345 aa16.65■□□□□ 0.26
SNIP1-203ENST00000493916 SEPSECSQ9HD40 501 aaKnown RBP16.65■□□□□ 0.26
SNIP1-203ENST00000493916 NRN1Q9NPD7 142 aa16.65■□□□□ 0.26
SNIP1-203ENST00000493916 ZNF688P0C7X2 276 aa16.64■□□□□ 0.25
SNIP1-203ENST00000493916 IL17DQ8TAD2 202 aa16.64■□□□□ 0.25
SNIP1-203ENST00000493916 SLC45A2Q9UMX9 530 aa16.64■□□□□ 0.25
SNIP1-203ENST00000493916 STARD9Q9P2P6 4700 aa16.64■□□□□ 0.25
SNIP1-203ENST00000493916 FNDC10F2Z333 226 aa16.63■□□□□ 0.25
SNIP1-203ENST00000493916 IL5P05113 134 aa16.63■□□□□ 0.25
SNIP1-203ENST00000493916 DLK1P80370 383 aa16.63■□□□□ 0.25
SNIP1-203ENST00000493916 IFITM3Q01628 133 aa16.63■□□□□ 0.25
SNIP1-203ENST00000493916 ENKURQ8TC29 256 aa16.63■□□□□ 0.25
SNIP1-203ENST00000493916 FBXL17Q9UF56 701 aa16.63■□□□□ 0.25
SNIP1-203ENST00000493916 FAM25EA8MYX2 175 aa16.62■□□□□ 0.25
SNIP1-203ENST00000493916 CCNKO75909 580 aa16.62■□□□□ 0.25
SNIP1-203ENST00000493916 METTL15P1P0C7V9 234 aa16.62■□□□□ 0.25
SNIP1-203ENST00000493916 ZFAND6Q6FIF0 208 aa16.62■□□□□ 0.25
SNIP1-203ENST00000493916 STHQ8IWL8 128 aa16.62■□□□□ 0.25
SNIP1-203ENST00000493916 BPIFCQ8NFQ6 507 aa16.62■□□□□ 0.25
SNIP1-203ENST00000493916 SMCO3A2RU48 225 aa16.61■□□□□ 0.25
SNIP1-203ENST00000493916 C7orf66A4D0T2 115 aa16.61■□□□□ 0.25
SNIP1-203ENST00000493916 C5orf51A6NDU8 294 aa16.61■□□□□ 0.25
SNIP1-203ENST00000493916 SNRPD3P62318 126 aaKnown RBP16.61■□□□□ 0.25
SNIP1-203ENST00000493916 TRPT1Q86TN4 253 aaKnown RBP16.61■□□□□ 0.25
SNIP1-203ENST00000493916 OR10P1Q8NGE3 313 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms