RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 MYH9P35579 1960 aaKnown RBP2.52□□□□□ -2.01
GTF3A-208ENST00000493903 APC2O95996 2303 aa2.52□□□□□ -2.01
GTF3A-208ENST00000493903 CACNA1EQ15878 2313 aa2.52□□□□□ -2.01
GTF3A-208ENST00000493903 KIAA1549LQ6ZVL6 1849 aa2.52□□□□□ -2.01
GTF3A-208ENST00000493903 LOC102725191A0A1B0GVB3 256 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 SPAARA0A1B0GVQ0 90 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 EXOC1LA0A1B0GW35 172 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 A0A1W2PQ67 120 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 PIRO00625 290 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 PSCAO43653 123 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 SYNGR2O43760 224 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 ATG12O94817 140 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 CPSF4O95639 269 aaKnown RBP2.51□□□□□ -2.01
GTF3A-208ENST00000493903 NPYP01303 97 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 IGHV1-69P01742 117 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 RBP1P09455 135 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 ZNF705DP0CH99 300 aaPredicted RBP2.51□□□□□ -2.01
GTF3A-208ENST00000493903 COL8A2P25067 703 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 SERPINB10P48595 397 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 RAB13P51153 203 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 TAS2R30P59541 319 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 ARHGAP11BQ3KRB8 267 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 KRTAP25-1Q3LHN0 102 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 KRTAP13-2Q52LG2 175 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 NOXRED1Q6NXP6 359 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 WDR59Q6PJI9 974 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 LYPD6Q86Y78 171 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 TBC1D19Q8N5T2 526 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 CNEP1R1Q8N9A8 125 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 DEFB124Q8NES8 71 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 CLDND2Q8NHS1 167 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 GPR119Q8TDV5 335 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 ERMAPQ96PL5 475 aaPredicted RBP2.51□□□□□ -2.01
GTF3A-208ENST00000493903 NMNAT3Q96T66 252 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 RSPO3Q9BXY4 272 aaPredicted RBP2.51□□□□□ -2.01
GTF3A-208ENST00000493903 UQCC1Q9NVA1 299 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 FBXL12Q9NXK8 326 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 PYCARDQ9ULZ3 195 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 HEY1Q9Y5J3 304 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 SPAG17Q6Q759 2223 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 PDCD11Q14690 1871 aaKnown RBP2.51□□□□□ -2.01
GTF3A-208ENST00000493903 TNRC6BQ9UPQ9 1833 aaKnown RBP2.51□□□□□ -2.01
GTF3A-208ENST00000493903 MYO18BQ8IUG5 2567 aa2.51□□□□□ -2.01
GTF3A-208ENST00000493903 PCDH15Q96QU1 1955 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 SEC16AO15027 2179 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 NUP210Q8TEM1 1887 aaPredicted RBP2.5□□□□□ -2.01
GTF3A-208ENST00000493903 C19orf71A6NCJ1 209 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 OR5K4A6NMS3 321 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 TP53I11O14683 189 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 PRB1P04280 392 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 C8GP07360 202 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 SULT1A3P0DMM9 295 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 SULT1A4P0DMN0 295 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 IFI30P13284 250 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 FXYD7P58549 80 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 IBA57Q5T440 356 aaKnown RBP2.5□□□□□ -2.01
GTF3A-208ENST00000493903 GOLT1AQ6ZVE7 132 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 SSX8Q7RTT4 187 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 SMIM15Q7Z3B0 74 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 AKAP14Q86UN6 197 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 ACOT12Q8WYK0 555 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 HIGD2AQ9BW72 106 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 AICDAQ9GZX7 198 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 EFCAB1Q9HAE3 211 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 SMPXQ9UHP9 88 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 SDK1Q7Z5N4 2213 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 ASCC3Q8N3C0 2202 aaKnown RBP2.5□□□□□ -2.01
GTF3A-208ENST00000493903 MYO16Q9Y6X6 1858 aa2.5□□□□□ -2.01
GTF3A-208ENST00000493903 PTPN13Q12923 2485 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 C17orf98A8MV24 154 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 H0YJX3 145 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 H3BQV1 296 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 ZNF682O95780 498 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 PPIBP23284 216 aaKnown RBP2.49□□□□□ -2.01
GTF3A-208ENST00000493903 CD24P25063 80 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 CRYBA4P53673 196 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 RPL30P62888 115 aaKnown RBP2.49□□□□□ -2.01
GTF3A-208ENST00000493903 CCL20P78556 96 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 AKR1C1Q04828 323 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 ZNF141Q15928 474 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 IGFBP7Q16270 282 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 C12orf45Q8N5I9 185 aaPredicted RBP2.49□□□□□ -2.01
GTF3A-208ENST00000493903 OR13C4Q8NGS5 318 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 OR13C6PQ8NH95 151 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 SMCR5Q8TEV8 140 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 TOMM6Q96B49 74 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 GPR146Q96CH1 333 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 OR8B2Q96RD0 313 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 CCDC90BQ9GZT6 254 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 PCBD2Q9H0N5 130 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 C16orf95Q9H693 158 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 MRPL40Q9NQ50 206 aaKnown RBP2.49□□□□□ -2.01
GTF3A-208ENST00000493903 CISHQ9NSE2 258 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 MCTS1Q9ULC4 181 aaKnown RBP2.49□□□□□ -2.01
GTF3A-208ENST00000493903 ACACAQ13085 2346 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 BSNQ9UPA5 3926 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 COL5A1P20908 1838 aaPredicted RBP2.49□□□□□ -2.01
GTF3A-208ENST00000493903 TSC2P49815 1807 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 ZNF407Q9C0G0 2248 aa2.49□□□□□ -2.01
GTF3A-208ENST00000493903 SPTA1P02549 2419 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms