RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 USMG5Q96IX5 58 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 CXorf58Q96LI9 332 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 TMEM147Q9BVK8 224 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 KLK15Q9H2R5 256 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 FBXL17Q9UF56 701 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 S4R3C0 116 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 TRBV9A0A0B4J1U6 114 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 A0A0D9SG52 128 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 UBE2L5PA0A1B0GUS4 154 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 KANTRA0A1W2PQU2 76 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 MFSD2BA6NFX1 497 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 PMS2P5A8MQ11 134 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 I3L2K1 104 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 K7EIM0 57 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 SCGB2A1O75556 95 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 DFFBO76075 338 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 IGHV3-11P01762 117 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 IGHV3-23P01764 117 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 MFAP4P55083 255 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 ZNF345Q14585 488 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 ATP6V1FQ16864 119 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 Q56UQ5 140 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 FAM209BQ5JX69 171 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 PVRIGQ6DKI7 326 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 KLHL30-AS1Q8NEE0 82 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 VN1R17PQ8TDU5 208 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 CACNG8Q8WXS5 425 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 BSCL2Q96G97 398 aaPredicted RBP9.35□□□□□ -0.91
UPF3A-210ENST00000493727 ATP5SQ99766 215 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 GGACTQ9BVM4 153 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 ARL6Q9H0F7 186 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 FNDC4Q9H6D8 234 aaPredicted RBP9.35□□□□□ -0.91
UPF3A-210ENST00000493727 UQCC1Q9NVA1 299 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 C21orf62Q9NYP8 219 aa9.35□□□□□ -0.91
UPF3A-210ENST00000493727 PRSS46E5RG02 174 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 IFNA5P01569 189 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 CXCL2P19875 107 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 C4BPBP20851 252 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 HOXD3P31249 432 aaPredicted RBP9.34□□□□□ -0.91
UPF3A-210ENST00000493727 NPBWR1P48145 328 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 RND2P52198 227 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 KLK9Q2XQG4 91 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 KCNRGQ8N5I3 272 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 RNF152Q8N8N0 203 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 SCARB1Q8WTV0 552 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 PPP1R14BQ96C90 147 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 B9D2Q9BPU9 175 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 ARPC5LQ9BPX5 153 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 KLK9Q9UKQ9 250 aa9.34□□□□□ -0.91
UPF3A-210ENST00000493727 SORL1Q92673 2214 aa9.33□□□□□ -0.92
UPF3A-210ENST00000493727 TRBV7-1A0A0A6YYK4 115 aa9.33□□□□□ -0.92
UPF3A-210ENST00000493727 BORCS7-ASMTA0A0B4J1R7 106 aa9.33□□□□□ -0.92
UPF3A-210ENST00000493727 BCL2L11O43521 198 aa9.33□□□□□ -0.92
UPF3A-210ENST00000493727 GNG7O60262 68 aa9.33□□□□□ -0.92
UPF3A-210ENST00000493727 ZNF266Q14584 549 aa9.33□□□□□ -0.92
UPF3A-210ENST00000493727 TMUB2Q71RG4 321 aa9.33□□□□□ -0.92
UPF3A-210ENST00000493727 C9orf62Q8N4C0 152 aa9.33□□□□□ -0.92
UPF3A-210ENST00000493727 SCGB1C1Q8TD33 95 aa9.33□□□□□ -0.92
UPF3A-210ENST00000493727 NPIPB3Q92617 1050 aa9.33□□□□□ -0.92
UPF3A-210ENST00000493727 OR5B12Q96R08 314 aa9.33□□□□□ -0.92
UPF3A-210ENST00000493727 GNB4Q9HAV0 340 aa9.33□□□□□ -0.92
UPF3A-210ENST00000493727 NPVFQ9HCQ7 196 aa9.33□□□□□ -0.92
UPF3A-210ENST00000493727 ZFP92A6NM28 416 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 FNDC10F2Z333 226 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 CCL24O00175 119 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 TAAR5O14804 337 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 FGF7P21781 194 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 GPR183P32249 361 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 RAB31Q13636 194 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 GAMTQ14353 236 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 LGALSLQ3ZCW2 172 aaPredicted RBP9.32□□□□□ -0.92
UPF3A-210ENST00000493727 CLEC19AQ6UXS0 136 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 ZNF491Q8N8L2 437 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 OR4X1Q8NH49 305 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 ZNF502Q8TBZ5 544 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 UBE2E2Q96LR5 201 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 TXN2Q99757 166 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 ZNF471Q9BX82 626 aaPredicted RBP9.32□□□□□ -0.92
UPF3A-210ENST00000493727 GAR1Q9NY12 217 aaKnown RBP9.32□□□□□ -0.92
UPF3A-210ENST00000493727 TENM2Q9NT68 2774 aa9.32□□□□□ -0.92
UPF3A-210ENST00000493727 OR2T8A6NH00 312 aa9.31□□□□□ -0.92
UPF3A-210ENST00000493727 NUPL2O15504 423 aaKnown RBP9.31□□□□□ -0.92
UPF3A-210ENST00000493727 CLN5O75503 358 aa9.31□□□□□ -0.92
UPF3A-210ENST00000493727 LGALS1P09382 135 aaKnown RBP9.31□□□□□ -0.92
UPF3A-210ENST00000493727 OR10J1P30954 320 aa9.31□□□□□ -0.92
UPF3A-210ENST00000493727 CDX1P47902 265 aaPredicted RBP9.31□□□□□ -0.92
UPF3A-210ENST00000493727 TMEM144Q7Z5S9 345 aa9.31□□□□□ -0.92
UPF3A-210ENST00000493727 TMEM116Q8NCL8 245 aa9.31□□□□□ -0.92
UPF3A-210ENST00000493727 MYOZ3Q8TDC0 251 aa9.31□□□□□ -0.92
UPF3A-210ENST00000493727 ATP6V0BQ99437 205 aa9.31□□□□□ -0.92
UPF3A-210ENST00000493727 WFDC1Q9HC57 220 aa9.31□□□□□ -0.92
UPF3A-210ENST00000493727 MRPL36Q9P0J6 103 aaKnown RBP9.31□□□□□ -0.92
UPF3A-210ENST00000493727 STARD9Q9P2P6 4700 aa9.3□□□□□ -0.92
UPF3A-210ENST00000493727 TRAV30A0A087WSZ9 112 aa9.3□□□□□ -0.92
UPF3A-210ENST00000493727 FABP1P07148 127 aa9.3□□□□□ -0.92
UPF3A-210ENST00000493727 FCGR2BP31994 310 aaPredicted RBP9.3□□□□□ -0.92
UPF3A-210ENST00000493727 ARL3P36405 182 aa9.3□□□□□ -0.92
UPF3A-210ENST00000493727 EIF5AP63241 154 aaKnown RBP9.3□□□□□ -0.92
UPF3A-210ENST00000493727 OPCMLQ14982 345 aa9.3□□□□□ -0.92
UPF3A-210ENST00000493727 VWC2Q2TAL6 325 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms